CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = I345T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4345I345TI3108TnonsynaTtaCt14414419587-9589

Details of the mutation I345T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4345I345TaTtaCt144144All0.000028
ORF1ab/nsp4345I345TaTtaCt3636AY.700.007506
ORF1ab/nsp4345I345TaTtaCt1616AY.440.000097
ORF1ab/nsp4345I345TaTtaCt1515AY.40.000023
ORF1ab/nsp4345I345TaTtaCt1313B.10.000119
ORF1ab/nsp4345I345TaTtaCt1212B.1.1.70.000011
ORF1ab/nsp4345I345TaTtaCt55AY.30.00005
ORF1ab/nsp4345I345TaTtaCt55B.1.1770.000066
ORF1ab/nsp4345I345TaTtaCt55B.1.20.000044
ORF1ab/nsp4345I345TaTtaCt33AY.1030.000019
ORF1ab/nsp4345I345TaTtaCt33AY.430.000013
ORF1ab/nsp4345I345TaTtaCt22AY.1190.000071
ORF1ab/nsp4345I345TaTtaCt22AY.3.10.000171
ORF1ab/nsp4345I345TaTtaCt22AY.920.000575
ORF1ab/nsp4345I345TaTtaCt22B.1.10.000036
ORF1ab/nsp4345I345TaTtaCt22B.1.2980.004228
ORF1ab/nsp4345I345TaTtaCt22B.1.4090.001563
ORF1ab/nsp4345I345TaTtaCt22B.1.617.20.000008
ORF1ab/nsp4345I345TaTtaCt22B.1.6200.001892
ORF1ab/nsp4345I345TaTtaCt22C.370.000232
ORF1ab/nsp4345I345TaTtaCt11AY.1170.000085
ORF1ab/nsp4345I345TaTtaCt11AY.250.000006
ORF1ab/nsp4345I345TaTtaCt11AY.300.000396
ORF1ab/nsp4345I345TaTtaCt11AY.320.000532
ORF1ab/nsp4345I345TaTtaCt11AY.5.40.000277
ORF1ab/nsp4345I345TaTtaCt11AY.790.001211
ORF1ab/nsp4345I345TaTtaCt11AY.840.000437
ORF1ab/nsp4345I345TaTtaCt11B.1.1.3500.04
ORF1ab/nsp4345I345TaTtaCt11B.1.177.860.000183
ORF1ab/nsp4345I345TaTtaCt11B.1.5250.000113
ORF1ab/nsp4345I345TaTtaCt11B.1.6280.000352
ORF1ab/nsp4345I345TaTtaCt11D.20.000075
ORF1ab/nsp4345I345TaTtaCt11P.10.000016