CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = I27T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp427I27TI2790TnonsynaTaaCa1986198618633-8635

Details of the mutation I27T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp427I27TaTaaCa19861986All0.00038
ORF1ab/nsp427I27TaTaaCa996996AY.600.934334
ORF1ab/nsp427I27TaTaaCa285285B.1.6340.976027
ORF1ab/nsp427I27TaTaaCa124124AY.40.000193
ORF1ab/nsp427I27TaTaaCa7676B.1.1.70.000068
ORF1ab/nsp427I27TaTaaCa6464B.1.2410.051948
ORF1ab/nsp427I27TaTaaCa5151B.1.2430.003549
ORF1ab/nsp427I27TaTaaCa4545AY.250.000271
ORF1ab/nsp427I27TaTaaCa3838AY.1200.001413
ORF1ab/nsp427I27TaTaaCa2929AY.30.000288
ORF1ab/nsp427I27TaTaaCa2323B.1.177.730.013024
ORF1ab/nsp427I27TaTaaCa1818B.1.6230.009657
ORF1ab/nsp427I27TaTaaCa1717B.1.6370.001242
ORF1ab/nsp427I27TaTaaCa1313B.1.2580.000865
ORF1ab/nsp427I27TaTaaCa1212B.1.258.110.004756
ORF1ab/nsp427I27TaTaaCa1111B.10.000101
ORF1ab/nsp427I27TaTaaCa1111B.1.4000.004719
ORF1ab/nsp427I27TaTaaCa1111B.1.617.20.000041
ORF1ab/nsp427I27TaTaaCa1010B.1.6210.000885
ORF1ab/nsp427I27TaTaaCa88AY.420.000322
ORF1ab/nsp427I27TaTaaCa88B.1.1770.000105
ORF1ab/nsp427I27TaTaaCa77AY.330.000467
ORF1ab/nsp427I27TaTaaCa77AY.470.000218
ORF1ab/nsp427I27TaTaaCa77B.1.20.000062
ORF1ab/nsp427I27TaTaaCa66AY.440.000037
ORF1ab/nsp427I27TaTaaCa55AY.450.000608
ORF1ab/nsp427I27TaTaaCa55B.1.1.5060.185185
ORF1ab/nsp427I27TaTaaCa55B.1.4270.000252
ORF1ab/nsp427I27TaTaaCa55B.1.5250.000566
ORF1ab/nsp427I27TaTaaCa55P.10.000079
ORF1ab/nsp427I27TaTaaCa44B.1.466.10.028777
ORF1ab/nsp427I27TaTaaCa44R.10.00036
ORF1ab/nsp427I27TaTaaCa33AY.1030.000019
ORF1ab/nsp427I27TaTaaCa33AY.200.000117
ORF1ab/nsp427I27TaTaaCa33AY.430.000013
ORF1ab/nsp427I27TaTaaCa33AY.650.001599
ORF1ab/nsp427I27TaTaaCa33B.1.177.870.002183
ORF1ab/nsp427I27TaTaaCa33B.1.5260.000071
ORF1ab/nsp427I27TaTaaCa22AY.1180.000125
ORF1ab/nsp427I27TaTaaCa22AY.1190.000071
ORF1ab/nsp427I27TaTaaCa22AY.130.000322
ORF1ab/nsp427I27TaTaaCa22AY.290.000032
ORF1ab/nsp427I27TaTaaCa22AY.390.000049
ORF1ab/nsp427I27TaTaaCa22AY.670.000929
ORF1ab/nsp427I27TaTaaCa22AY.750.000112
ORF1ab/nsp427I27TaTaaCa22AY.75.10.000361
ORF1ab/nsp427I27TaTaaCa22AY.9.20.000073
ORF1ab/nsp427I27TaTaaCa22B.1.1.3960.090909
ORF1ab/nsp427I27TaTaaCa22B.1.1.5190.000079
ORF1ab/nsp427I27TaTaaCa22B.1.3060.011429
ORF1ab/nsp427I27TaTaaCa22D.20.00015
ORF1ab/nsp427I27TaTaaCa11A0.000387
ORF1ab/nsp427I27TaTaaCa11AY.23.10.000417
ORF1ab/nsp427I27TaTaaCa11AY.260.000028
ORF1ab/nsp427I27TaTaaCa11AY.3.10.000085
ORF1ab/nsp427I27TaTaaCa11AY.360.000148
ORF1ab/nsp427I27TaTaaCa11AY.4.10.000737
ORF1ab/nsp427I27TaTaaCa11AY.46.40.000165
ORF1ab/nsp427I27TaTaaCa11AY.50.000021
ORF1ab/nsp427I27TaTaaCa11AY.520.000814
ORF1ab/nsp427I27TaTaaCa11AY.550.000917
ORF1ab/nsp427I27TaTaaCa11AY.60.000041
ORF1ab/nsp427I27TaTaaCa11AY.850.000427
ORF1ab/nsp427I27TaTaaCa11AY.880.000884
ORF1ab/nsp427I27TaTaaCa11AY.930.000273
ORF1ab/nsp427I27TaTaaCa11AY.940.000443
ORF1ab/nsp427I27TaTaaCa11AY.980.000079
ORF1ab/nsp427I27TaTaaCa11B.1.10.000018
ORF1ab/nsp427I27TaTaaCa11B.1.1570.002985
ORF1ab/nsp427I27TaTaaCa11B.1.177.460.000918
ORF1ab/nsp427I27TaTaaCa11B.1.177.70.000165
ORF1ab/nsp427I27TaTaaCa11B.1.3510.00003
ORF1ab/nsp427I27TaTaaCa11B.1.3960.000706
ORF1ab/nsp427I27TaTaaCa11B.1.4290.000024
ORF1ab/nsp427I27TaTaaCa11B.1.4590.004082
ORF1ab/nsp427I27TaTaaCa11B.1.617.10.000129
ORF1ab/nsp427I27TaTaaCa11B.1.6190.000871
ORF1ab/nsp427I27TaTaaCa11B.1.6250.002353
ORF1ab/nsp427I27TaTaaCa11C.360.000911
ORF1ab/nsp427I27TaTaaCa11C.36.30.000567
ORF1ab/nsp427I27TaTaaCa11P.1.120.000484
ORF1ab/nsp427I27TaTaaCa11Q.10.000126
ORF1ab/nsp427I27TaTaaCa11W.40.001351