CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = I199T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4199I199TI2962TnonsynaTtaCt1090.99149-9151
ORF1ab/nsp4199I199TI2962TnonsynaTTaCC1010.19149-9151

Details of the mutation I199T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4199I199TaTtaCt910All0.000002
ORF1ab/nsp4199I199TaTTaCC110All0
ORF1ab/nsp4199I199TaTtaCt22B.1.1.70.000002
ORF1ab/nsp4199I199TaTtaCt22B.1.2360.004107
ORF1ab/nsp4199I199TaTtaCt11AY.1030.000006
ORF1ab/nsp4199I199TaTtaCt11AY.4.20.000022
ORF1ab/nsp4199I199TaTtaCt11B.1.5760.000907
ORF1ab/nsp4199I199TaTTaCC11B.1.617.20.000004
ORF1ab/nsp4199I199TaTtaCt11D.20.000075
ORF1ab/nsp4199I199TaTtaCt11P.10.000016