CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = H389del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4389H389del1H3152del1delcaTca-530.69719-9721
ORF1ab/nsp4389H389del1H3152del1delCAtT-t510.29719-9721
ORF1ab/nsp4389H389del1H3152del1delCat-at510.29719-9721

Details of the mutation H389del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4389H389del1caTca-35All0.000001
ORF1ab/nsp4389H389del1CAtT-t15All0
ORF1ab/nsp4389H389del1Cat-at15All0
ORF1ab/nsp4389H389del1CAtT-t12AY.440.000006
ORF1ab/nsp4389H389del1caTca-12AY.440.000006
ORF1ab/nsp4389H389del1caTca-11AY.1030.000006
ORF1ab/nsp4389H389del1Cat-at11B.1.1.70.000001
ORF1ab/nsp4389H389del1caTca-11B.1.20.000009