CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = F478del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4478F478del1F3241del1delttCtt-420.59986-9988
ORF1ab/nsp4478F478del1F3241del1delTtc-tc420.59986-9988

Details of the mutation F478del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4478F478del1ttCtt-24All0
ORF1ab/nsp4478F478del1Ttc-tc24All0
ORF1ab/nsp4478F478del1ttCtt-12B.1.617.20.000004
ORF1ab/nsp4478F478del1Ttc-tc12B.1.617.20.000004
ORF1ab/nsp4478F478del1Ttc-tc11B.1.20.000009
ORF1ab/nsp4478F478del1ttCtt-11B.1.3960.000706