CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = F478F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4478F478FF3241FsynttCttT2558255819986-9988

Details of the mutation F478F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4478F478FttCttT25582558All0.000489
ORF1ab/nsp4478F478FttCttT12731273AY.90.086048
ORF1ab/nsp4478F478FttCttT231231A.280.611111
ORF1ab/nsp4478F478FttCttT193193B.1.1.70.000173
ORF1ab/nsp4478F478FttCttT7878Y.11
ORF1ab/nsp4478F478FttCttT6464B.1.617.20.000241
ORF1ab/nsp4478F478FttCttT5353B.1.4290.001247
ORF1ab/nsp4478F478FttCttT4949AY.470.001524
ORF1ab/nsp4478F478FttCttT3535AY.40.000054
ORF1ab/nsp4478F478FttCttT3434AY.39.10.001347
ORF1ab/nsp4478F478FttCttT3131B.1.177.520.054482
ORF1ab/nsp4478F478FttCttT2929B.1.1770.000382
ORF1ab/nsp4478F478FttCttT2626AY.390.000642
ORF1ab/nsp4478F478FttCttT2424AY.430.000106
ORF1ab/nsp4478F478FttCttT2121AY.30.000209
ORF1ab/nsp4478F478FttCttT2121B.10.000192
ORF1ab/nsp4478F478FttCttT2020AY.250.00012
ORF1ab/nsp4478F478FttCttT1818B.1.10.000327
ORF1ab/nsp4478F478FttCttT1818B.1.1.500.01222
ORF1ab/nsp4478F478FttCttT1818B.1.5950.004697
ORF1ab/nsp4478F478FttCttT1818P.10.000284
ORF1ab/nsp4478F478FttCttT1717B.1.1.2220.003468
ORF1ab/nsp4478F478FttCttT1515AY.10.005936
ORF1ab/nsp4478F478FttCttT1414AY.1030.000087
ORF1ab/nsp4478F478FttCttT1313AY.440.000079
ORF1ab/nsp4478F478FttCttT1313B.1.5750.003944
ORF1ab/nsp4478F478FttCttT99AY.130.001449
ORF1ab/nsp4478F478FttCttT88AY.1170.000676
ORF1ab/nsp4478F478FttCttT88AY.1190.000282
ORF1ab/nsp4478F478FttCttT88AY.120.10.002568
ORF1ab/nsp4478F478FttCttT88AY.910.005844
ORF1ab/nsp4478F478FttCttT77B.1.1600.000218
ORF1ab/nsp4478F478FttCttT77B.1.20.000062
ORF1ab/nsp4478F478FttCttT66AY.75.10.001082
ORF1ab/nsp4478F478FttCttT66B.1.1.3170.00247
ORF1ab/nsp4478F478FttCttT55AY.1000.00023
ORF1ab/nsp4478F478FttCttT55AY.1020.000133
ORF1ab/nsp4478F478FttCttT55AY.200.000194
ORF1ab/nsp4478F478FttCttT55AY.230.000349
ORF1ab/nsp4478F478FttCttT55AY.540.000477
ORF1ab/nsp4478F478FttCttT55AY.610.000524
ORF1ab/nsp4478F478FttCttT55B.1.177.670.038168
ORF1ab/nsp4478F478FttCttT44AY.1130.00057
ORF1ab/nsp4478F478FttCttT44AY.260.000113
ORF1ab/nsp4478F478FttCttT44AY.4.20.000087
ORF1ab/nsp4478F478FttCttT44B0.000511
ORF1ab/nsp4478F478FttCttT44B.1.360.000584
ORF1ab/nsp4478F478FttCttT44B.1.4270.000202
ORF1ab/nsp4478F478FttCttT44C.370.000464
ORF1ab/nsp4478F478FttCttT33AY.290.000047
ORF1ab/nsp4478F478FttCttT33AY.3.10.000256
ORF1ab/nsp4478F478FttCttT33AY.46.50.000595
ORF1ab/nsp4478F478FttCttT33B.1.2400.000647
ORF1ab/nsp4478F478FttCttT33B.1.36.180.001261
ORF1ab/nsp4478F478FttCttT33B.1.5250.000339
ORF1ab/nsp4478F478FttCttT33B.1.5610.001191
ORF1ab/nsp4478F478FttCttT33B.1.6210.000266
ORF1ab/nsp4478F478FttCttT22AD.20.000438
ORF1ab/nsp4478F478FttCttT22AY.1160.000574
ORF1ab/nsp4478F478FttCttT22AY.1200.000074
ORF1ab/nsp4478F478FttCttT22AY.340.000194
ORF1ab/nsp4478F478FttCttT22AY.460.000208
ORF1ab/nsp4478F478FttCttT22AY.580.001815
ORF1ab/nsp4478F478FttCttT22AY.9.10.000167
ORF1ab/nsp4478F478FttCttT22AY.9.20.000073
ORF1ab/nsp4478F478FttCttT22AY.900.001369
ORF1ab/nsp4478F478FttCttT22B.1.1.2690.002706
ORF1ab/nsp4478F478FttCttT22B.1.1.3480.001592
ORF1ab/nsp4478F478FttCttT22B.1.1.5190.000079
ORF1ab/nsp4478F478FttCttT22B.1.1.80.007168
ORF1ab/nsp4478F478FttCttT22B.1.3110.000549
ORF1ab/nsp4478F478FttCttT22B.1.5260.000047
ORF1ab/nsp4478F478FttCttT22B.1.5820.000981
ORF1ab/nsp4478F478FttCttT22C.37.10.005236
ORF1ab/nsp4478F478FttCttT22P.1.140.000096
ORF1ab/nsp4478F478FttCttT110.055556
ORF1ab/nsp4478F478FttCttT11A0.000387
ORF1ab/nsp4478F478FttCttT11A.20.000662
ORF1ab/nsp4478F478FttCttT11AY.1140.000231
ORF1ab/nsp4478F478FttCttT11AY.160.00038
ORF1ab/nsp4478F478FttCttT11AY.20.000356
ORF1ab/nsp4478F478FttCttT11AY.270.000065
ORF1ab/nsp4478F478FttCttT11AY.330.000067
ORF1ab/nsp4478F478FttCttT11AY.34.10.00051
ORF1ab/nsp4478F478FttCttT11AY.4.50.000107
ORF1ab/nsp4478F478FttCttT11AY.420.00004
ORF1ab/nsp4478F478FttCttT11AY.450.000122
ORF1ab/nsp4478F478FttCttT11AY.50.000021
ORF1ab/nsp4478F478FttCttT11AY.700.000209
ORF1ab/nsp4478F478FttCttT11AY.740.000116
ORF1ab/nsp4478F478FttCttT11AY.920.000287
ORF1ab/nsp4478F478FttCttT11AY.980.000079
ORF1ab/nsp4478F478FttCttT11AY.99.20.000092
ORF1ab/nsp4478F478FttCttT11B.1.1.2070.001182
ORF1ab/nsp4478F478FttCttT11B.1.1.2730.006757
ORF1ab/nsp4478F478FttCttT11B.1.1.3120.001912
ORF1ab/nsp4478F478FttCttT11B.1.1.3160.000925
ORF1ab/nsp4478F478FttCttT11B.1.1.3330.001076
ORF1ab/nsp4478F478FttCttT11B.1.1.460.004367
ORF1ab/nsp4478F478FttCttT11B.1.1.4850.016667
ORF1ab/nsp4478F478FttCttT11B.1.1.630.000386
ORF1ab/nsp4478F478FttCttT11B.1.1110.001175
ORF1ab/nsp4478F478FttCttT11B.1.177.460.000918
ORF1ab/nsp4478F478FttCttT11B.1.177.730.000566
ORF1ab/nsp4478F478FttCttT11B.1.2210.000071
ORF1ab/nsp4478F478FttCttT11B.1.2580.000067
ORF1ab/nsp4478F478FttCttT11B.1.2790.000514
ORF1ab/nsp4478F478FttCttT11B.1.4200.010417
ORF1ab/nsp4478F478FttCttT11B.1.5640.000426
ORF1ab/nsp4478F478FttCttT11B.1.6180.004032
ORF1ab/nsp4478F478FttCttT11B.1.6230.000536
ORF1ab/nsp4478F478FttCttT11B.1.6280.000352
ORF1ab/nsp4478F478FttCttT11B.1.6370.000073
ORF1ab/nsp4478F478FttCttT11C.110.010638
ORF1ab/nsp4478F478FttCttT11C.2.10.006667
ORF1ab/nsp4478F478FttCttT11P.1.100.000269
ORF1ab/nsp4478F478FttCttT11Q.10.000126