CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = F390C

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4390F390CF3153CnonsyntTctGc616119722-9724

Details of the mutation F390C within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4390F390CtTctGc6161All0.000012
ORF1ab/nsp4390F390CtTctGc1010B.1.1.100.011148
ORF1ab/nsp4390F390CtTctGc77B.1.10.000127
ORF1ab/nsp4390F390CtTctGc66AY.40.000009
ORF1ab/nsp4390F390CtTctGc66AY.440.000037
ORF1ab/nsp4390F390CtTctGc44B.10.000037
ORF1ab/nsp4390F390CtTctGc44B.1.4290.000094
ORF1ab/nsp4390F390CtTctGc44B.1.6280.001409
ORF1ab/nsp4390F390CtTctGc44B.3.10.006633
ORF1ab/nsp4390F390CtTctGc22AY.1200.000074
ORF1ab/nsp4390F390CtTctGc22AY.200.000078
ORF1ab/nsp4390F390CtTctGc22B.1.617.20.000008
ORF1ab/nsp4390F390CtTctGc11AY.130.000161
ORF1ab/nsp4390F390CtTctGc11AY.30.00001
ORF1ab/nsp4390F390CtTctGc11AY.430.000004
ORF1ab/nsp4390F390CtTctGc11AY.98.10.000048
ORF1ab/nsp4390F390CtTctGc11B.1.1.5250.005464
ORF1ab/nsp4390F390CtTctGc11B.1.1.70.000001
ORF1ab/nsp4390F390CtTctGc11B.1.1770.000013
ORF1ab/nsp4390F390CtTctGc11B.1.2650.001271
ORF1ab/nsp4390F390CtTctGc11B.1.5250.000113
ORF1ab/nsp4390F390CtTctGc11C.370.000116