CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = F375S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4375F375SF3138SnonsyntTctCc16895168900.9997049677-9679
ORF1ab/nsp4375F375SF3138SnonsyntTCtCT1689540.0002367569677-9679
ORF1ab/nsp4375F375SF3138SnonsyntTCtCA1689510.00005918919677-9679

Details of the mutation F375S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4375F375StTctCc1689016895All0.00323
ORF1ab/nsp4375F375StTCtCT416895All0.000001
ORF1ab/nsp4375F375StTCtCA116895All0
ORF1ab/nsp4375F375StTctCc89328932B.1.617.20.033633
ORF1ab/nsp4375F375StTctCc41444144AY.350.965742
ORF1ab/nsp4375F375StTctCc17501750AY.480.813953
ORF1ab/nsp4375F375StTctCc610610AY.16.10.286654
ORF1ab/nsp4375F375StTctCc207208AY.440.00126
ORF1ab/nsp4375F375StTCtCT1208AY.440.000006
ORF1ab/nsp4375F375StTctCc177177AY.130.028493
ORF1ab/nsp4375F375StTctCc121121AY.1080.133407
ORF1ab/nsp4375F375StTctCc103103AY.230.007184
ORF1ab/nsp4375F375StTctCc8080B.10.000733
ORF1ab/nsp4375F375StTctCc6060AY.590.03178
ORF1ab/nsp4375F375StTctCc5858AY.920.016662
ORF1ab/nsp4375F375StTctCc5555AY.680.015056
ORF1ab/nsp4375F375StTctCc4545AY.980.003555
ORF1ab/nsp4375F375StTctCc4444AY.540.004195
ORF1ab/nsp4375F375StTctCc4040AY.660.042781
ORF1ab/nsp4375F375StTctCc3535AY.190.039909
ORF1ab/nsp4375F375StTctCc3232AY.520.026059
ORF1ab/nsp4375F375StTctCc2727AY.370.008534
ORF1ab/nsp4375F375StTctCc2526B.1.1.70.000022
ORF1ab/nsp4375F375StTCtCA126B.1.1.70.000001
ORF1ab/nsp4375F375StTctCc2626B.1.20.000229
ORF1ab/nsp4375F375StTctCc2121AY.430.000093
ORF1ab/nsp4375F375StTctCc2121AY.5.40.005811
ORF1ab/nsp4375F375StTctCc1818AY.1160.005162
ORF1ab/nsp4375F375StTctCc1516AY.1030.000093
ORF1ab/nsp4375F375StTCtCT116AY.1030.000006
ORF1ab/nsp4375F375StTctCc1313AY.40.00002
ORF1ab/nsp4375F375StTctCc1111AY.470.000342
ORF1ab/nsp4375F375StTctCc1010B.1.10.000181
ORF1ab/nsp4375F375StTctCc99AY.1210.001218
ORF1ab/nsp4375F375StTctCc99AY.550.008257
ORF1ab/nsp4375F375StTctCc88AY.240.003448
ORF1ab/nsp4375F375StTctCc88AY.750.000448
ORF1ab/nsp4375F375StTctCc88AY.770.009019
ORF1ab/nsp4375F375StTctCc88B.1.617.10.001032
ORF1ab/nsp4375F375StTctCc77AY.610.000733
ORF1ab/nsp4375F375StTctCc77AY.870.005828
ORF1ab/nsp4375F375StTctCc77B.1.177.510.031963
ORF1ab/nsp4375F375StTctCc66AY.640.003571
ORF1ab/nsp4375F375StTctCc66AY.98.10.000291
ORF1ab/nsp4375F375StTctCc66B0.000767
ORF1ab/nsp4375F375StTctCc55AY.1000.00023
ORF1ab/nsp4375F375StTctCc55AY.1180.000313
ORF1ab/nsp4375F375StTctCc55AY.30.00005
ORF1ab/nsp4375F375StTctCc55AY.450.000608
ORF1ab/nsp4375F375StTctCc55AY.560.008026
ORF1ab/nsp4375F375StTctCc44AY.200.000155
ORF1ab/nsp4375F375StTctCc44AY.250.000024
ORF1ab/nsp4375F375StTctCc44AY.670.001857
ORF1ab/nsp4375F375StTctCc44AY.780.006163
ORF1ab/nsp4375F375StTctCc44AY.880.003537
ORF1ab/nsp4375F375StTctCc44AY.9.20.000147
ORF1ab/nsp4375F375StTctCc44P.10.000063
ORF1ab/nsp4375F375StTctCc33AY.220.006276
ORF1ab/nsp4375F375StTctCc33AY.620.001307
ORF1ab/nsp4375F375StTctCc33AY.710.001425
ORF1ab/nsp4375F375StTctCc33AY.950.002283
ORF1ab/nsp4375F375StTctCc33B.1.36.290.001552
ORF1ab/nsp4375F375StTctCc33B.1.5760.00272
ORF1ab/nsp4375F375StTCtCT220.111111
ORF1ab/nsp4375F375StTctCc22AY.100.00106
ORF1ab/nsp4375F375StTctCc22AY.1010.000981
ORF1ab/nsp4375F375StTctCc22AY.110.002677
ORF1ab/nsp4375F375StTctCc22AY.120.000632
ORF1ab/nsp4375F375StTctCc22AY.530.000575
ORF1ab/nsp4375F375StTctCc22AY.700.000417
ORF1ab/nsp4375F375StTctCc22B.1.360.000292
ORF1ab/nsp4375F375StTctCc11AY.1060.000335
ORF1ab/nsp4375F375StTctCc11AY.1100.000113
ORF1ab/nsp4375F375StTctCc11AY.140.000088
ORF1ab/nsp4375F375StTctCc11AY.270.000065
ORF1ab/nsp4375F375StTctCc11AY.280.00189
ORF1ab/nsp4375F375StTctCc11AY.290.000016
ORF1ab/nsp4375F375StTctCc11AY.320.000532
ORF1ab/nsp4375F375StTctCc11AY.330.000067
ORF1ab/nsp4375F375StTctCc11AY.360.000148
ORF1ab/nsp4375F375StTctCc11AY.380.000499
ORF1ab/nsp4375F375StTctCc11AY.390.000025
ORF1ab/nsp4375F375StTctCc11AY.410.000294
ORF1ab/nsp4375F375StTctCc11AY.420.00004
ORF1ab/nsp4375F375StTctCc11AY.460.000104
ORF1ab/nsp4375F375StTctCc11AY.5.30.000337
ORF1ab/nsp4375F375StTctCc11AY.510.000909
ORF1ab/nsp4375F375StTctCc11AY.580.000907
ORF1ab/nsp4375F375StTctCc11AY.75.10.00018
ORF1ab/nsp4375F375StTctCc11AY.820.001357
ORF1ab/nsp4375F375StTctCc11AY.850.000427
ORF1ab/nsp4375F375StTctCc11AY.910.00073
ORF1ab/nsp4375F375StTctCc11AY.960.002075
ORF1ab/nsp4375F375StTctCc11AY.99.20.000092
ORF1ab/nsp4375F375StTctCc11B.1.1.1620.029412
ORF1ab/nsp4375F375StTctCc11B.1.1770.000013
ORF1ab/nsp4375F375StTctCc11B.1.177.180.00116
ORF1ab/nsp4375F375StTctCc11B.1.2060.000816
ORF1ab/nsp4375F375StTctCc11B.1.2140.003663
ORF1ab/nsp4375F375StTctCc11B.1.2580.000067
ORF1ab/nsp4375F375StTctCc11B.1.4530.003236
ORF1ab/nsp4375F375StTctCc11B.1.4590.004082
ORF1ab/nsp4375F375StTctCc11B.1.5260.000024
ORF1ab/nsp4375F375StTctCc11B.1.5960.000087
ORF1ab/nsp4375F375StTctCc11B.1.6230.000536
ORF1ab/nsp4375F375StTctCc11B.400.000364
ORF1ab/nsp4375F375StTctCc11D.20.000075