CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = F308L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4308F308LF3071LnonsynTttCtt76550.7236849476-9478
ORF1ab/nsp4308F308LF3071LnonsynttTttG76130.1710539476-9478
ORF1ab/nsp4308F308LF3071LnonsynttTttA7670.09210539476-9478
ORF1ab/nsp4308F308LF3071LnonsynTtTCtC7610.01315799476-9478

Details of the mutation F308L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4308F308LTttCtt5576All0.000011
ORF1ab/nsp4308F308LttTttG1376All0.000002
ORF1ab/nsp4308F308LttTttA776All0.000001
ORF1ab/nsp4308F308LTtTCtC176All0
ORF1ab/nsp4308F308LTttCtt1313B.1.1.70.000012
ORF1ab/nsp4308F308LTttCtt66AY.250.000036
ORF1ab/nsp4308F308LTttCtt45B.10.000037
ORF1ab/nsp4308F308LttTttG15B.10.000009
ORF1ab/nsp4308F308LttTttA33AY.700.000626
ORF1ab/nsp4308F308LTttCtt23B.1.10.000036
ORF1ab/nsp4308F308LttTttA13B.1.10.000018
ORF1ab/nsp4308F308LTttCtt33B.1.1.330.001263
ORF1ab/nsp4308F308LTttCtt33B.1.1600.000094
ORF1ab/nsp4308F308LTttCtt33B.1.177.440.001557
ORF1ab/nsp4308F308LTttCtt23B.1.3510.000059
ORF1ab/nsp4308F308LttTttG13B.1.3510.00003
ORF1ab/nsp4308F308LttTttG23B.1.617.20.000008
ORF1ab/nsp4308F308LTttCtt13B.1.617.20.000004
ORF1ab/nsp4308F308LttTttG22AY.440.000012
ORF1ab/nsp4308F308LttTttG22B.1.1.630.000772
ORF1ab/nsp4308F308LTttCtt22B.1.1770.000026
ORF1ab/nsp4308F308LTttCtt22B.1.20.000018
ORF1ab/nsp4308F308LttTttA12B.1.258.170.000104
ORF1ab/nsp4308F308LTttCtt12B.1.258.170.000104
ORF1ab/nsp4308F308LTttCtt11AY.160.00038
ORF1ab/nsp4308F308LTttCtt11AY.230.00007
ORF1ab/nsp4308F308LTttCtt11AY.340.000097
ORF1ab/nsp4308F308LTttCtt11AY.40.000002
ORF1ab/nsp4308F308LttTttG11AY.430.000004
ORF1ab/nsp4308F308LttTttG11B.1.1.2630.001558
ORF1ab/nsp4308F308LttTttG11B.1.1.3720.000689
ORF1ab/nsp4308F308LTttCtt11B.1.177.310.011494
ORF1ab/nsp4308F308LTttCtt11B.1.177.730.000566
ORF1ab/nsp4308F308LTttCtt11B.1.2430.00007
ORF1ab/nsp4308F308LTttCtt11B.1.2580.000067
ORF1ab/nsp4308F308LTttCtt11B.1.4290.000024
ORF1ab/nsp4308F308LttTttG11B.1.5960.000087
ORF1ab/nsp4308F308LTttCtt11B.1.6060.006024
ORF1ab/nsp4308F308LttTttA11B.1.6200.000946
ORF1ab/nsp4308F308LTttCtt11B.1.6210.000089
ORF1ab/nsp4308F308LttTttA11B.550.00295
ORF1ab/nsp4308F308LTtTCtC11C.350.000774
ORF1ab/nsp4308F308LTttCtt11D.20.000075
ORF1ab/nsp4308F308LTttCtt11P.1.140.000048
ORF1ab/nsp4308F308LttTttG11P.30.001595