CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = F101L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4101F101LF2864LnonsynTttCtt8848440.9547518855-8857
ORF1ab/nsp4101F101LF2864LnonsynttTttA884290.03280548855-8857
ORF1ab/nsp4101F101LF2864LnonsynttTttG884100.01131228855-8857
ORF1ab/nsp4101F101LF2864LnonsynTtTCtG88410.001131228855-8857

Details of the mutation F101L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4101F101LTttCtt844884All0.000161
ORF1ab/nsp4101F101LttTttA29884All0.000006
ORF1ab/nsp4101F101LttTttG10884All0.000002
ORF1ab/nsp4101F101LTtTCtG1884All0
ORF1ab/nsp4101F101LTttCtt535540B.1.1.70.000479
ORF1ab/nsp4101F101LttTttA5540B.1.1.70.000004
ORF1ab/nsp4101F101LTttCtt168168B.1.1.2040.510638
ORF1ab/nsp4101F101LTttCtt3536B.1.617.20.000132
ORF1ab/nsp4101F101LttTttA136B.1.617.20.000004
ORF1ab/nsp4101F101LTttCtt2121B.1.5260.000494
ORF1ab/nsp4101F101LttTttA1018AY.40.000016
ORF1ab/nsp4101F101LTttCtt818AY.40.000012
ORF1ab/nsp4101F101LTttCtt912B.1.20.000079
ORF1ab/nsp4101F101LttTttA212B.1.20.000018
ORF1ab/nsp4101F101LttTttG112B.1.20.000009
ORF1ab/nsp4101F101LTttCtt77AY.1060.002344
ORF1ab/nsp4101F101LTttCtt66AY.3.10.000512
ORF1ab/nsp4101F101LTttCtt66B.1.5960.000523
ORF1ab/nsp4101F101LTttCtt46P.10.000063
ORF1ab/nsp4101F101LTtTCtG16P.10.000016
ORF1ab/nsp4101F101LttTttG16P.10.000016
ORF1ab/nsp4101F101LTttCtt55AY.230.000349
ORF1ab/nsp4101F101LTttCtt25AY.430.000009
ORF1ab/nsp4101F101LttTttA25AY.430.000009
ORF1ab/nsp4101F101LttTttG15AY.430.000004
ORF1ab/nsp4101F101LTttCtt55B.1.36.80.005
ORF1ab/nsp4101F101LttTttG44B.1.10.000073
ORF1ab/nsp4101F101LTttCtt33AU.20.007264
ORF1ab/nsp4101F101LTttCtt33AY.390.000074
ORF1ab/nsp4101F101LTttCtt33P.30.004785
ORF1ab/nsp4101F101LttTttG220.111111
ORF1ab/nsp4101F101LTttCtt22AY.1030.000012
ORF1ab/nsp4101F101LttTttA22AY.130.000322
ORF1ab/nsp4101F101LTttCtt22AY.30.00002
ORF1ab/nsp4101F101LTttCtt22AY.4.20.000043
ORF1ab/nsp4101F101LttTttA12AY.540.000095
ORF1ab/nsp4101F101LTttCtt12AY.540.000095
ORF1ab/nsp4101F101LTttCtt22B0.000256
ORF1ab/nsp4101F101LttTttA22B.1.177.100.001756
ORF1ab/nsp4101F101LTttCtt22B.1.466.20.000782
ORF1ab/nsp4101F101LTttCtt11AY.240.000431
ORF1ab/nsp4101F101LttTttA11AY.440.000006
ORF1ab/nsp4101F101LttTttA11AY.690.000187
ORF1ab/nsp4101F101LTttCtt11AY.740.000116
ORF1ab/nsp4101F101LTttCtt11AY.750.000056
ORF1ab/nsp4101F101LttTttA11B.10.000009
ORF1ab/nsp4101F101LttTttG11B.1.1.1210.002427
ORF1ab/nsp4101F101LTttCtt11B.1.1.1330.008475
ORF1ab/nsp4101F101LTttCtt11B.1.1040.00369
ORF1ab/nsp4101F101LTttCtt11B.1.160.220.006757
ORF1ab/nsp4101F101LttTttA11B.1.2430.00007
ORF1ab/nsp4101F101LTttCtt11B.1.4290.000024
ORF1ab/nsp4101F101LTttCtt11B.1.5990.00365
ORF1ab/nsp4101F101LTttCtt11B.1.617.10.000129
ORF1ab/nsp4101F101LTttCtt11B.1.6210.000089
ORF1ab/nsp4101F101LTttCtt11B.60.00091
ORF1ab/nsp4101F101LTttCtt11C.370.000116
ORF1ab/nsp4101F101LTttCtt11D.20.000075