CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = D477A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4477D477AD3240AnonsyngAcgCc1291280.9922489983-9985
ORF1ab/nsp4477D477AD3240AnonsyngACgCT12910.007751949983-9985

Details of the mutation D477A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4477D477AgAcgCc128129All0.000024
ORF1ab/nsp4477D477AgACgCT1129All0
ORF1ab/nsp4477D477AgAcgCc5454B.1.2430.003758
ORF1ab/nsp4477D477AgAcgCc2020B.10.000183
ORF1ab/nsp4477D477AgAcgCc1919B.1.5001
ORF1ab/nsp4477D477AgAcgCc1111B.1.1.70.00001
ORF1ab/nsp4477D477AgAcgCc99B.1.617.20.000034
ORF1ab/nsp4477D477AgAcgCc22AY.30.00002
ORF1ab/nsp4477D477AgAcgCc22AY.330.000134
ORF1ab/nsp4477D477AgAcgCc22B.1.1.5260.007092
ORF1ab/nsp4477D477AgAcgCc11AY.1180.000063
ORF1ab/nsp4477D477AgAcgCc11AY.250.000006
ORF1ab/nsp4477D477AgAcgCc11AY.390.000025
ORF1ab/nsp4477D477AgAcgCc11AY.440.000006
ORF1ab/nsp4477D477AgAcgCc11B.1.1600.000031
ORF1ab/nsp4477D477AgAcgCc11B.1.177.580.001332
ORF1ab/nsp4477D477AgAcgCc11B.1.2400.000216
ORF1ab/nsp4477D477AgAcgCc11B.1.3960.000706
ORF1ab/nsp4477D477AgACgCT11B.1.4970.000315
ORF1ab/nsp4477D477AgAcgCc11P.1.10.000318