CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = D459Y

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4459D459YD3222YnonsynGatTat18170.9444449929-9931
ORF1ab/nsp4459D459YD3222YnonsynGaTTaC1810.05555569929-9931

Details of the mutation D459Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4459D459YGatTat1718All0.000003
ORF1ab/nsp4459D459YGaTTaC118All0
ORF1ab/nsp4459D459YGatTat44B.10.000037
ORF1ab/nsp4459D459YGatTat33AY.250.000018
ORF1ab/nsp4459D459YGatTat33AY.440.000018
ORF1ab/nsp4459D459YGatTat22AY.40.000003
ORF1ab/nsp4459D459YGatTat11AY.60.000041
ORF1ab/nsp4459D459YGatTat11B.1.1.70.000001
ORF1ab/nsp4459D459YGatTat11B.1.1600.000031
ORF1ab/nsp4459D459YGatTat11C.300.001727
ORF1ab/nsp4459D459YGaTTaC11C.350.000774
ORF1ab/nsp4459D459YGatTat11D.20.000075