CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = D279N

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4279D279ND3042NnonsynGacAac353435330.9997179389-9391
ORF1ab/nsp4279D279ND3042NnonsynGaCAaT353410.0002829659389-9391

Details of the mutation D279N within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4279D279NGacAac35333534All0.000676
ORF1ab/nsp4279D279NGaCAaT13534All0
ORF1ab/nsp4279D279NGacAac13211321B.1.10.023964
ORF1ab/nsp4279D279NGacAac489490AY.4.20.010606
ORF1ab/nsp4279D279NGaCAaT1490AY.4.20.000022
ORF1ab/nsp4279D279NGacAac252252B.1.1.390.12844
ORF1ab/nsp4279D279NGacAac228228B.1.1.3541
ORF1ab/nsp4279D279NGacAac189189B.1.5600.875
ORF1ab/nsp4279D279NGacAac173173AY.40.000269
ORF1ab/nsp4279D279NGacAac147147B.1.1.5260.521277
ORF1ab/nsp4279D279NGacAac109109B.10.000998
ORF1ab/nsp4279D279NGacAac7070B.1.1.5190.00278
ORF1ab/nsp4279D279NGacAac4646B.1.1.280.014317
ORF1ab/nsp4279D279NGacAac4545B.1.1.3530.9375
ORF1ab/nsp4279D279NGacAac3838B.1.1.70.000034
ORF1ab/nsp4279D279NGacAac3636AY.1200.001338
ORF1ab/nsp4279D279NGacAac2424B.1.617.20.00009
ORF1ab/nsp4279D279NGacAac2222AY.250.000132
ORF1ab/nsp4279D279NGacAac1919B.1.1.1890.028744
ORF1ab/nsp4279D279NGacAac1717AY.1030.000106
ORF1ab/nsp4279D279NGacAac1717B.1.1.2410.035197
ORF1ab/nsp4279D279NGacAac1515AY.540.00143
ORF1ab/nsp4279D279NGacAac1414B.1.4270.000707
ORF1ab/nsp4279D279NGacAac1212B.1.1.4090.033994
ORF1ab/nsp4279D279NGacAac1212B.1.160.290.050633
ORF1ab/nsp4279D279NGacAac1111AY.1190.000388
ORF1ab/nsp4279D279NGacAac1111B.1.1.1821
ORF1ab/nsp4279D279NGacAac1010B.1.2430.000696
ORF1ab/nsp4279D279NGacAac99AY.99.20.000829
ORF1ab/nsp4279D279NGacAac88B.1.1.170.133333
ORF1ab/nsp4279D279NGacAac77B.1.1.2940.008861
ORF1ab/nsp4279D279NGacAac66AY.430.000027
ORF1ab/nsp4279D279NGacAac66B0.000767
ORF1ab/nsp4279D279NGacAac66B.1.20.000053
ORF1ab/nsp4279D279NGacAac55B.1.1.4160.004525
ORF1ab/nsp4279D279NGacAac44B.1.1.130.142857
ORF1ab/nsp4279D279NGacAac44B.1.1.2530.010025
ORF1ab/nsp4279D279NGacAac44B.1.1.4640.005891
ORF1ab/nsp4279D279NGacAac44B.1.1770.000053
ORF1ab/nsp4279D279NGacAac44B.1.177.730.002265
ORF1ab/nsp4279D279NGacAac44B.1.360.000584
ORF1ab/nsp4279D279NGacAac44B.1.5990.014599
ORF1ab/nsp4279D279NGacAac33AY.440.000018
ORF1ab/nsp4279D279NGacAac33AY.680.000821
ORF1ab/nsp4279D279NGacAac33B.1.1.2160.002671
ORF1ab/nsp4279D279NGacAac33B.1.1.2770.002276
ORF1ab/nsp4279D279NGacAac33B.1.1.3050.011583
ORF1ab/nsp4279D279NGacAac33B.1.1.3060.001315
ORF1ab/nsp4279D279NGacAac33B.1.258.170.000312
ORF1ab/nsp4279D279NGacAac33B.1.362.10.2
ORF1ab/nsp4279D279NGacAac33B.1.6090.001438
ORF1ab/nsp4279D279NGacAac22AY.200.000078
ORF1ab/nsp4279D279NGacAac22AY.30.00002
ORF1ab/nsp4279D279NGacAac22AY.50.000041
ORF1ab/nsp4279D279NGacAac22B.1.1.1170.019417
ORF1ab/nsp4279D279NGacAac22B.1.1.2030.033898
ORF1ab/nsp4279D279NGacAac22B.1.1.2310.006192
ORF1ab/nsp4279D279NGacAac22B.1.1.2370.010811
ORF1ab/nsp4279D279NGacAac22B.1.1.2540.022472
ORF1ab/nsp4279D279NGacAac22B.1.1.3270.2
ORF1ab/nsp4279D279NGacAac22B.1.1.3560.017094
ORF1ab/nsp4279D279NGacAac22B.1.1.370.000386
ORF1ab/nsp4279D279NGacAac22B.1.1.4020.022222
ORF1ab/nsp4279D279NGacAac22B.1.1.4190.014815
ORF1ab/nsp4279D279NGacAac22B.1.1.4520.222222
ORF1ab/nsp4279D279NGacAac22B.1.1.830.00542
ORF1ab/nsp4279D279NGacAac22B.1.258.70.003824
ORF1ab/nsp4279D279NGacAac22B.1.4290.000047
ORF1ab/nsp4279D279NGacAac22B.1.4560.006536
ORF1ab/nsp4279D279NGacAac22P.10.000032
ORF1ab/nsp4279D279NGacAac22Q.10.000253
ORF1ab/nsp4279D279NGacAac11AT.10.005128
ORF1ab/nsp4279D279NGacAac11AY.1000.000046
ORF1ab/nsp4279D279NGacAac11AY.1020.000027
ORF1ab/nsp4279D279NGacAac11AY.1130.000142
ORF1ab/nsp4279D279NGacAac11AY.120.20.001285
ORF1ab/nsp4279D279NGacAac11AY.230.00007
ORF1ab/nsp4279D279NGacAac11AY.280.00189
ORF1ab/nsp4279D279NGacAac11AY.3.10.000085
ORF1ab/nsp4279D279NGacAac11AY.39.10.00004
ORF1ab/nsp4279D279NGacAac11AY.4.50.000107
ORF1ab/nsp4279D279NGacAac11AY.470.000031
ORF1ab/nsp4279D279NGacAac11AY.60.000041
ORF1ab/nsp4279D279NGacAac11AY.750.000056
ORF1ab/nsp4279D279NGacAac11B.1.1.10.000327
ORF1ab/nsp4279D279NGacAac11B.1.1.100.001115
ORF1ab/nsp4279D279NGacAac11B.1.1.1350.004695
ORF1ab/nsp4279D279NGacAac11B.1.1.1410.002012
ORF1ab/nsp4279D279NGacAac11B.1.1.1480.008772
ORF1ab/nsp4279D279NGacAac11B.1.1.1610.003534
ORF1ab/nsp4279D279NGacAac11B.1.1.1740.003378
ORF1ab/nsp4279D279NGacAac11B.1.1.1920.002309
ORF1ab/nsp4279D279NGacAac11B.1.1.2210.010101
ORF1ab/nsp4279D279NGacAac11B.1.1.2360.006897
ORF1ab/nsp4279D279NGacAac11B.1.1.250.000569
ORF1ab/nsp4279D279NGacAac11B.1.1.2620.015152
ORF1ab/nsp4279D279NGacAac11B.1.1.2910.000742
ORF1ab/nsp4279D279NGacAac11B.1.1.3090.005848
ORF1ab/nsp4279D279NGacAac11B.1.1.3260.001761
ORF1ab/nsp4279D279NGacAac11B.1.1.3700.012658
ORF1ab/nsp4279D279NGacAac11B.1.1.3710.010417
ORF1ab/nsp4279D279NGacAac11B.1.1.3740.002375
ORF1ab/nsp4279D279NGacAac11B.1.1.3760.005952
ORF1ab/nsp4279D279NGacAac11B.1.1.3980.003226
ORF1ab/nsp4279D279NGacAac11B.1.1.4060.006494
ORF1ab/nsp4279D279NGacAac11B.1.1.4250.045455
ORF1ab/nsp4279D279NGacAac11B.1.1.4300.041667
ORF1ab/nsp4279D279NGacAac11B.1.1.440.00241
ORF1ab/nsp4279D279NGacAac11B.1.1.5210.005348
ORF1ab/nsp4279D279NGacAac11B.1.1.530.013699
ORF1ab/nsp4279D279NGacAac11B.1.1.570.011494
ORF1ab/nsp4279D279NGacAac11B.1.1390.000733
ORF1ab/nsp4279D279NGacAac11B.1.177.190.001431
ORF1ab/nsp4279D279NGacAac11B.1.1790.003759
ORF1ab/nsp4279D279NGacAac11B.1.2210.000071
ORF1ab/nsp4279D279NGacAac11B.1.2350.002519
ORF1ab/nsp4279D279NGacAac11B.1.258.110.000396
ORF1ab/nsp4279D279NGacAac11B.1.258.40.003448
ORF1ab/nsp4279D279NGacAac11B.1.2600.003344
ORF1ab/nsp4279D279NGacAac11B.1.2980.002114
ORF1ab/nsp4279D279NGacAac11B.1.3490.000715
ORF1ab/nsp4279D279NGacAac11B.1.36.100.004785
ORF1ab/nsp4279D279NGacAac11B.1.36.350.002604
ORF1ab/nsp4279D279NGacAac11B.1.3660.004878
ORF1ab/nsp4279D279NGacAac11B.1.3770.004566
ORF1ab/nsp4279D279NGacAac11B.1.4590.004082
ORF1ab/nsp4279D279NGacAac11B.1.466.20.000391
ORF1ab/nsp4279D279NGacAac11B.1.4680.005714
ORF1ab/nsp4279D279NGacAac11B.1.5210.004975
ORF1ab/nsp4279D279NGacAac11B.1.5250.000113
ORF1ab/nsp4279D279NGacAac11B.1.5610.000397
ORF1ab/nsp4279D279NGacAac11B.1.5960.000087
ORF1ab/nsp4279D279NGacAac11B.1.617.10.000129
ORF1ab/nsp4279D279NGacAac11B.1.6210.000089
ORF1ab/nsp4279D279NGacAac11P.1.140.000048