CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = C418S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4418C418SC3181SnonsyntGctCc1060.69806-9808
ORF1ab/nsp4418C418SC3181SnonsynTgcAgc1030.39806-9808
ORF1ab/nsp4418C418SC3181SnonsynTgCAgT1010.19806-9808

Details of the mutation C418S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4418C418StGctCc610All0.000001
ORF1ab/nsp4418C418STgcAgc310All0.000001
ORF1ab/nsp4418C418STgCAgT110All0
ORF1ab/nsp4418C418STgcAgc120.055556
ORF1ab/nsp4418C418STgCAgT120.055556
ORF1ab/nsp4418C418STgcAgc11A.250.018182
ORF1ab/nsp4418C418StGctCc11B0.000128
ORF1ab/nsp4418C418StGctCc11B.1.1.3560.008547
ORF1ab/nsp4418C418STgcAgc11B.1.1600.000031
ORF1ab/nsp4418C418StGctCc11B.1.20.000009
ORF1ab/nsp4418C418StGctCc11B.1.36.10.00114
ORF1ab/nsp4418C418StGctCc11B.1.6370.000073
ORF1ab/nsp4418C418StGctCc11D.20.000075