CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = A92V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp492A92VA2855VnonsyngCtgTt29057290560.9999668828-8830
ORF1ab/nsp492A92VA2855VnonsyngCTgTA2905710.00003441518828-8830

Details of the mutation A92V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp492A92VgCtgTt2905629057All0.005557
ORF1ab/nsp492A92VgCTgTA129057All0
ORF1ab/nsp492A92VgCtgTt2482824829AY.1190.876633
ORF1ab/nsp492A92VgCTgTA124829AY.1190.000035
ORF1ab/nsp492A92VgCtgTt23162316B.1.617.20.008721
ORF1ab/nsp492A92VgCtgTt842842AY.40.001311
ORF1ab/nsp492A92VgCtgTt195195B.1.1.70.000175
ORF1ab/nsp492A92VgCtgTt171171B.1.20.001506
ORF1ab/nsp492A92VgCtgTt7272AY.4.20.001562
ORF1ab/nsp492A92VgCtgTt4545AY.430.000199
ORF1ab/nsp492A92VgCtgTt4545AY.470.0014
ORF1ab/nsp492A92VgCtgTt4343AY.250.000259
ORF1ab/nsp492A92VgCtgTt4040P.10.00063
ORF1ab/nsp492A92VgCtgTt3939AY.30.000388
ORF1ab/nsp492A92VgCtgTt3333AY.440.000201
ORF1ab/nsp492A92VgCtgTt2626AY.330.001736
ORF1ab/nsp492A92VgCtgTt2121AY.1030.00013
ORF1ab/nsp492A92VgCtgTt2121AY.390.000519
ORF1ab/nsp492A92VgCtgTt1919AY.1170.001606
ORF1ab/nsp492A92VgCtgTt1414B.1.10.000254
ORF1ab/nsp492A92VgCtgTt1212B.10.00011
ORF1ab/nsp492A92VgCtgTt1111AY.340.001067
ORF1ab/nsp492A92VgCtgTt1111AY.980.000869
ORF1ab/nsp492A92VgCtgTt1010B.1.5800.04065
ORF1ab/nsp492A92VgCtgTt99AY.1100.001014
ORF1ab/nsp492A92VgCtgTt99AY.4.50.000967
ORF1ab/nsp492A92VgCtgTt99AY.450.001095
ORF1ab/nsp492A92VgCtgTt99AY.460.000937
ORF1ab/nsp492A92VgCtgTt99AY.740.001041
ORF1ab/nsp492A92VgCtgTt88AY.920.002298
ORF1ab/nsp492A92VgCtgTt88Q.10.001011
ORF1ab/nsp492A92VgCtgTt77AY.1130.000997
ORF1ab/nsp492A92VgCtgTt77AY.230.000488
ORF1ab/nsp492A92VgCtgTt77AY.260.000198
ORF1ab/nsp492A92VgCtgTt66AY.1180.000376
ORF1ab/nsp492A92VgCtgTt66AY.1200.000223
ORF1ab/nsp492A92VgCtgTt66AY.50.000124
ORF1ab/nsp492A92VgCtgTt55AY.200.000194
ORF1ab/nsp492A92VgCtgTt55AY.750.00028
ORF1ab/nsp492A92VgCtgTt55B.1.1.3220.04386
ORF1ab/nsp492A92VgCtgTt55B.1.5260.000118
ORF1ab/nsp492A92VgCtgTt44AY.420.000161
ORF1ab/nsp492A92VgCtgTt44AY.60.000165
ORF1ab/nsp492A92VgCtgTt44B.1.4290.000094
ORF1ab/nsp492A92VgCtgTt33AY.23.10.001252
ORF1ab/nsp492A92VgCtgTt33AY.290.000047
ORF1ab/nsp492A92VgCtgTt33AY.360.000445
ORF1ab/nsp492A92VgCtgTt33AY.46.60.000217
ORF1ab/nsp492A92VgCtgTt33AY.75.10.000541
ORF1ab/nsp492A92VgCtgTt33AY.810.005976
ORF1ab/nsp492A92VgCtgTt33AY.9.20.00011
ORF1ab/nsp492A92VgCtgTt33B.1.177.190.004292
ORF1ab/nsp492A92VgCtgTt33B.1.177.600.000655
ORF1ab/nsp492A92VgCtgTt33B.1.3510.000089
ORF1ab/nsp492A92VgCtgTt33B.1.5960.000261
ORF1ab/nsp492A92VgCtgTt22AY.1000.000092
ORF1ab/nsp492A92VgCtgTt22AY.1040.003968
ORF1ab/nsp492A92VgCtgTt22AY.160.000759
ORF1ab/nsp492A92VgCtgTt22AY.240.000862
ORF1ab/nsp492A92VgCtgTt22AY.690.000373
ORF1ab/nsp492A92VgCtgTt22AY.700.000417
ORF1ab/nsp492A92VgCtgTt22AY.90.000135
ORF1ab/nsp492A92VgCtgTt22AY.9.10.000167
ORF1ab/nsp492A92VgCtgTt22AY.950.001522
ORF1ab/nsp492A92VgCtgTt22B.1.1.2140.000111
ORF1ab/nsp492A92VgCtgTt22B.1.1.5190.000079
ORF1ab/nsp492A92VgCtgTt22B.1.1770.000026
ORF1ab/nsp492A92VgCtgTt22B.1.5250.000226
ORF1ab/nsp492A92VgCtgTt22P.1.160.000748
ORF1ab/nsp492A92VgCtgTt11A.270.001656
ORF1ab/nsp492A92VgCtgTt11AD.20.000219
ORF1ab/nsp492A92VgCtgTt11AY.1020.000027
ORF1ab/nsp492A92VgCtgTt11AY.1060.000335
ORF1ab/nsp492A92VgCtgTt11AY.1090.00074
ORF1ab/nsp492A92VgCtgTt11AY.1160.000287
ORF1ab/nsp492A92VgCtgTt11AY.1210.000135
ORF1ab/nsp492A92VgCtgTt11AY.350.000233
ORF1ab/nsp492A92VgCtgTt11AY.370.000316
ORF1ab/nsp492A92VgCtgTt11AY.380.000499
ORF1ab/nsp492A92VgCtgTt11AY.39.10.00004
ORF1ab/nsp492A92VgCtgTt11AY.4.30.000842
ORF1ab/nsp492A92VgCtgTt11AY.5.30.000337
ORF1ab/nsp492A92VgCtgTt11AY.540.000095
ORF1ab/nsp492A92VgCtgTt11AY.570.000656
ORF1ab/nsp492A92VgCtgTt11AY.590.00053
ORF1ab/nsp492A92VgCtgTt11AY.610.000105
ORF1ab/nsp492A92VgCtgTt11AY.620.000436
ORF1ab/nsp492A92VgCtgTt11AY.640.000595
ORF1ab/nsp492A92VgCtgTt11AY.7.10.000113
ORF1ab/nsp492A92VgCtgTt11AY.910.00073
ORF1ab/nsp492A92VgCtgTt11AY.930.000273
ORF1ab/nsp492A92VgCtgTt11AY.940.000443
ORF1ab/nsp492A92VgCtgTt11AZ.50.003509
ORF1ab/nsp492A92VgCtgTt11B0.000128
ORF1ab/nsp492A92VgCtgTt11B.1.1.100.001115
ORF1ab/nsp492A92VgCtgTt11B.1.1.1210.002427
ORF1ab/nsp492A92VgCtgTt11B.1.1.1350.004695
ORF1ab/nsp492A92VgCtgTt11B.1.1.1590.004673
ORF1ab/nsp492A92VgCtgTt11B.1.1.1920.002309
ORF1ab/nsp492A92VgCtgTt11B.1.1.2220.000204
ORF1ab/nsp492A92VgCtgTt11B.1.1.3330.001076
ORF1ab/nsp492A92VgCtgTt11B.1.1.3620.005618
ORF1ab/nsp492A92VgCtgTt11B.1.1.4610.012048
ORF1ab/nsp492A92VgCtgTt11B.1.1600.000031
ORF1ab/nsp492A92VgCtgTt11B.1.160.80.001289
ORF1ab/nsp492A92VgCtgTt11B.1.258.170.000104
ORF1ab/nsp492A92VgCtgTt11B.1.36.290.000517
ORF1ab/nsp492A92VgCtgTt11B.1.4530.003236
ORF1ab/nsp492A92VgCtgTt11B.1.5810.009434
ORF1ab/nsp492A92VgCtgTt11B.1.617.30.002985
ORF1ab/nsp492A92VgCtgTt11B.1.6210.000089
ORF1ab/nsp492A92VgCtgTt11B.100.008264
ORF1ab/nsp492A92VgCtgTt11C.370.000116
ORF1ab/nsp492A92VgCtgTt11P.1.120.000484
ORF1ab/nsp492A92VgCtgTt11P.1.140.000048
ORF1ab/nsp492A92VgCtgTt11P.1.150.000232
ORF1ab/nsp492A92VgCtgTt11P.1.170.000162
ORF1ab/nsp492A92VgCtgTt11Q.80.000165