CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = A457A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4457A457AA3220AsyngcAgcG7955370.6754729923-9925
ORF1ab/nsp4457A457AA3220AsyngcAgcT7952160.2716989923-9925
ORF1ab/nsp4457A457AA3220AsyngcAgcC795420.05283029923-9925

Details of the mutation A457A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4457A457AgcAgcG537795All0.000103
ORF1ab/nsp4457A457AgcAgcT216795All0.000041
ORF1ab/nsp4457A457AgcAgcC42795All0.000008
ORF1ab/nsp4457A457AgcAgcG382382B.1.36.380.627258
ORF1ab/nsp4457A457AgcAgcT7979B.1.177.720.267797
ORF1ab/nsp4457A457AgcAgcG2455AY.40.000037
ORF1ab/nsp4457A457AgcAgcC2455AY.40.000037
ORF1ab/nsp4457A457AgcAgcT755AY.40.000011
ORF1ab/nsp4457A457AgcAgcG2237B.1.1.70.00002
ORF1ab/nsp4457A457AgcAgcT1437B.1.1.70.000013
ORF1ab/nsp4457A457AgcAgcC137B.1.1.70.000001
ORF1ab/nsp4457A457AgcAgcG2736AY.1030.000168
ORF1ab/nsp4457A457AgcAgcT736AY.1030.000043
ORF1ab/nsp4457A457AgcAgcC236AY.1030.000012
ORF1ab/nsp4457A457AgcAgcG2729B.1.20.000238
ORF1ab/nsp4457A457AgcAgcT229B.1.20.000018
ORF1ab/nsp4457A457AgcAgcT2222AY.140.001936
ORF1ab/nsp4457A457AgcAgcT1113P.10.000173
ORF1ab/nsp4457A457AgcAgcG213P.10.000032
ORF1ab/nsp4457A457AgcAgcG1112B.1.2210.000781
ORF1ab/nsp4457A457AgcAgcT112B.1.2210.000071
ORF1ab/nsp4457A457AgcAgcT1111AY.230.000767
ORF1ab/nsp4457A457AgcAgcG99AY.260.000255
ORF1ab/nsp4457A457AgcAgcC99B.1.1.630.003472
ORF1ab/nsp4457A457AgcAgcG88B.1.360.001167
ORF1ab/nsp4457A457AgcAgcT24AY.1020.000053
ORF1ab/nsp4457A457AgcAgcG24AY.1020.000053
ORF1ab/nsp4457A457AgcAgcT44AY.1160.001147
ORF1ab/nsp4457A457AgcAgcT44AY.750.000224
ORF1ab/nsp4457A457AgcAgcT24B.1.617.20.000008
ORF1ab/nsp4457A457AgcAgcC14B.1.617.20.000004
ORF1ab/nsp4457A457AgcAgcG14B.1.617.20.000004
ORF1ab/nsp4457A457AgcAgcG23AY.250.000012
ORF1ab/nsp4457A457AgcAgcT13AY.250.000006
ORF1ab/nsp4457A457AgcAgcT23AY.430.000009
ORF1ab/nsp4457A457AgcAgcC13AY.430.000004
ORF1ab/nsp4457A457AgcAgcT33AY.440.000018
ORF1ab/nsp4457A457AgcAgcT23B.1.1770.000026
ORF1ab/nsp4457A457AgcAgcG13B.1.1770.000013
ORF1ab/nsp4457A457AgcAgcT33B.1.3510.000089
ORF1ab/nsp4457A457AgcAgcG23B.1.5260.000047
ORF1ab/nsp4457A457AgcAgcT13B.1.5260.000024
ORF1ab/nsp4457A457AgcAgcT23P.1.140.000096
ORF1ab/nsp4457A457AgcAgcG13P.1.140.000048
ORF1ab/nsp4457A457AgcAgcT22AD.20.000438
ORF1ab/nsp4457A457AgcAgcT22AY.200.000078
ORF1ab/nsp4457A457AgcAgcT12AY.46.60.000072
ORF1ab/nsp4457A457AgcAgcG12AY.46.60.000072
ORF1ab/nsp4457A457AgcAgcT12AY.480.000465
ORF1ab/nsp4457A457AgcAgcG12AY.480.000465
ORF1ab/nsp4457A457AgcAgcT22AY.9.10.000167
ORF1ab/nsp4457A457AgcAgcT12AY.980.000079
ORF1ab/nsp4457A457AgcAgcC12AY.980.000079
ORF1ab/nsp4457A457AgcAgcG12B.10.000009
ORF1ab/nsp4457A457AgcAgcT12B.10.000009
ORF1ab/nsp4457A457AgcAgcG12B.1.10.000018
ORF1ab/nsp4457A457AgcAgcC12B.1.10.000018
ORF1ab/nsp4457A457AgcAgcT22B.1.1.1980.002937
ORF1ab/nsp4457A457AgcAgcT22B.1.1.2220.000408
ORF1ab/nsp4457A457AgcAgcT22B.1.1.2980.001724
ORF1ab/nsp4457A457AgcAgcG12B.1.1.5190.00004
ORF1ab/nsp4457A457AgcAgcT12B.1.1.5190.00004
ORF1ab/nsp4457A457AgcAgcT12B.1.4290.000024
ORF1ab/nsp4457A457AgcAgcC12B.1.4290.000024
ORF1ab/nsp4457A457AgcAgcG22B.1.466.20.000782
ORF1ab/nsp4457A457AgcAgcT11AY.120.000316
ORF1ab/nsp4457A457AgcAgcG11AY.30.00001
ORF1ab/nsp4457A457AgcAgcG11AY.4.20.000022
ORF1ab/nsp4457A457AgcAgcG11AY.420.00004
ORF1ab/nsp4457A457AgcAgcT11AY.50.000021
ORF1ab/nsp4457A457AgcAgcT11AY.580.000907
ORF1ab/nsp4457A457AgcAgcT11AY.590.00053
ORF1ab/nsp4457A457AgcAgcT11AY.75.10.00018
ORF1ab/nsp4457A457AgcAgcT11AY.870.000833
ORF1ab/nsp4457A457AgcAgcT11B.1.1.2140.000055
ORF1ab/nsp4457A457AgcAgcT11B.1.1.280.000311
ORF1ab/nsp4457A457AgcAgcT11B.1.1.3180.000302
ORF1ab/nsp4457A457AgcAgcG11B.1.160.150.00495
ORF1ab/nsp4457A457AgcAgcT11B.1.177.420.000894
ORF1ab/nsp4457A457AgcAgcT11B.1.177.460.000918
ORF1ab/nsp4457A457AgcAgcG11B.1.177.60.000977
ORF1ab/nsp4457A457AgcAgcG11B.1.177.730.000566
ORF1ab/nsp4457A457AgcAgcT11B.1.1790.003759
ORF1ab/nsp4457A457AgcAgcT11B.1.258.40.003448
ORF1ab/nsp4457A457AgcAgcG11B.1.3850.010638
ORF1ab/nsp4457A457AgcAgcT11B.1.5240.001406
ORF1ab/nsp4457A457AgcAgcG11B.1.5250.000113
ORF1ab/nsp4457A457AgcAgcG11B.1.5500.013699
ORF1ab/nsp4457A457AgcAgcT11B.1.6280.000352
ORF1ab/nsp4457A457AgcAgcT11B.400.000364
ORF1ab/nsp4457A457AgcAgcC11D.20.000075
ORF1ab/nsp4457A457AgcAgcT11P.1.150.000232
ORF1ab/nsp4457A457AgcAgcT11R.10.00009