CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = A446P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4446A446PA3209PnonsynGctCct11100.9090919890-9892
ORF1ab/nsp4446A446PA3209PnonsynGcTCcC1110.09090919890-9892

Details of the mutation A446P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4446A446PGctCct1011All0.000002
ORF1ab/nsp4446A446PGcTCcC111All0
ORF1ab/nsp4446A446PGctCct23B0.000256
ORF1ab/nsp4446A446PGcTCcC13B0.000128
ORF1ab/nsp4446A446PGctCct22D.20.00015
ORF1ab/nsp4446A446PGctCct11B.10.000009
ORF1ab/nsp4446A446PGctCct11B.1.1.70.000001
ORF1ab/nsp4446A446PGctCct11B.1.1770.000013
ORF1ab/nsp4446A446PGctCct11B.1.20.000009
ORF1ab/nsp4446A446PGctCct11B.1.2340.000132
ORF1ab/nsp4446A446PGctCct11B.1.5820.000491