CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = A307S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4307A307SA3070SnonsynGctTct1871840.9839579473-9475
ORF1ab/nsp4307A307SA3070SnonsynGcTTcC18710.005347599473-9475
ORF1ab/nsp4307A307SA3070SnonsynGCTAGC18710.005347599473-9475
ORF1ab/nsp4307A307SA3070SnonsynGCtAGt18710.005347599473-9475

Details of the mutation A307S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4307A307SGctTct184187All0.000035
ORF1ab/nsp4307A307SGcTTcC1187All0
ORF1ab/nsp4307A307SGCTAGC1187All0
ORF1ab/nsp4307A307SGCtAGt1187All0
ORF1ab/nsp4307A307SGctTct4747AY.440.000286
ORF1ab/nsp4307A307SGctTct2828AY.430.000124
ORF1ab/nsp4307A307SGctTct2020B.1.5260.00047
ORF1ab/nsp4307A307SGctTct1414B.1.1.70.000013
ORF1ab/nsp4307A307SGctTct1212AY.40.000019
ORF1ab/nsp4307A307SGctTct1010B.10.000092
ORF1ab/nsp4307A307SGctTct77AY.260.000198
ORF1ab/nsp4307A307SGctTct44AY.1000.000184
ORF1ab/nsp4307A307SGctTct44AY.1080.00441
ORF1ab/nsp4307A307SGctTct34B.1.20.000026
ORF1ab/nsp4307A307SGcTTcC14B.1.20.000009
ORF1ab/nsp4307A307SGctTct44B.1.617.20.000015
ORF1ab/nsp4307A307SGctTct130.055556
ORF1ab/nsp4307A307SGCtAGt130.055556
ORF1ab/nsp4307A307SGCTAGC130.055556
ORF1ab/nsp4307A307SGctTct33B.1.1.280.000934
ORF1ab/nsp4307A307SGctTct22AY.290.000032
ORF1ab/nsp4307A307SGctTct22AY.30.00002
ORF1ab/nsp4307A307SGctTct22AY.680.000547
ORF1ab/nsp4307A307SGctTct11AY.10.000396
ORF1ab/nsp4307A307SGctTct11AY.1030.000006
ORF1ab/nsp4307A307SGctTct11AY.1050.000643
ORF1ab/nsp4307A307SGctTct11AY.1160.000287
ORF1ab/nsp4307A307SGctTct11AY.1200.000037
ORF1ab/nsp4307A307SGctTct11AY.240.000431
ORF1ab/nsp4307A307SGctTct11AY.250.000006
ORF1ab/nsp4307A307SGctTct11AY.320.000532
ORF1ab/nsp4307A307SGctTct11AY.330.000067
ORF1ab/nsp4307A307SGctTct11AY.450.000122
ORF1ab/nsp4307A307SGctTct11AY.46.50.000198
ORF1ab/nsp4307A307SGctTct11AY.46.60.000072
ORF1ab/nsp4307A307SGctTct11B0.000128
ORF1ab/nsp4307A307SGctTct11B.1.1.5190.00004
ORF1ab/nsp4307A307SGctTct11B.1.1770.000013
ORF1ab/nsp4307A307SGctTct11B.1.2100.002132
ORF1ab/nsp4307A307SGctTct11B.1.2210.000071
ORF1ab/nsp4307A307SGctTct11B.1.2430.00007
ORF1ab/nsp4307A307SGctTct11B.1.3910.001127
ORF1ab/nsp4307A307SGctTct11B.1.4270.00005
ORF1ab/nsp4307A307SGctTct11C.370.000116