CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : Mut = A307A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4307A307AA3070AsyngcTgcC1691300.7692319473-9475
ORF1ab/nsp4307A307AA3070AsyngcTgcG169250.1479299473-9475
ORF1ab/nsp4307A307AA3070AsyngcTgcA169140.08284029473-9475

Details of the mutation A307A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4307A307AgcTgcC130169All0.000025
ORF1ab/nsp4307A307AgcTgcG25169All0.000005
ORF1ab/nsp4307A307AgcTgcA14169All0.000003
ORF1ab/nsp4307A307AgcTgcC2832B.1.1.70.000025
ORF1ab/nsp4307A307AgcTgcA332B.1.1.70.000003
ORF1ab/nsp4307A307AgcTgcG132B.1.1.70.000001
ORF1ab/nsp4307A307AgcTgcC1213B.10.00011
ORF1ab/nsp4307A307AgcTgcG113B.10.000009
ORF1ab/nsp4307A307AgcTgcC1011AY.40.000016
ORF1ab/nsp4307A307AgcTgcG111AY.40.000002
ORF1ab/nsp4307A307AgcTgcC88D.20.0006
ORF1ab/nsp4307A307AgcTgcC67AY.430.000027
ORF1ab/nsp4307A307AgcTgcG17AY.430.000004
ORF1ab/nsp4307A307AgcTgcC36B.1.10.000054
ORF1ab/nsp4307A307AgcTgcG26B.1.10.000036
ORF1ab/nsp4307A307AgcTgcA16B.1.10.000018
ORF1ab/nsp4307A307AgcTgcG66B.1.4270.000303
ORF1ab/nsp4307A307AgcTgcC56B.1.617.20.000019
ORF1ab/nsp4307A307AgcTgcA16B.1.617.20.000004
ORF1ab/nsp4307A307AgcTgcC45AY.250.000024
ORF1ab/nsp4307A307AgcTgcG15AY.250.000006
ORF1ab/nsp4307A307AgcTgcC45B.1.20.000035
ORF1ab/nsp4307A307AgcTgcG15B.1.20.000009
ORF1ab/nsp4307A307AgcTgcC44AY.1030.000025
ORF1ab/nsp4307A307AgcTgcG24AY.440.000012
ORF1ab/nsp4307A307AgcTgcC24AY.440.000012
ORF1ab/nsp4307A307AgcTgcC34B.1.2430.000209
ORF1ab/nsp4307A307AgcTgcG14B.1.2430.00007
ORF1ab/nsp4307A307AgcTgcA34B.1.3510.000089
ORF1ab/nsp4307A307AgcTgcC14B.1.3510.00003
ORF1ab/nsp4307A307AgcTgcA33B.1.1.330.001263
ORF1ab/nsp4307A307AgcTgcG33B.1.1600.000094
ORF1ab/nsp4307A307AgcTgcG33B.1.2140.010989
ORF1ab/nsp4307A307AgcTgcC22AY.30.00002
ORF1ab/nsp4307A307AgcTgcC22B.1.1.280.000622
ORF1ab/nsp4307A307AgcTgcC22B.1.1.700.000682
ORF1ab/nsp4307A307AgcTgcC22B.1.1770.000026
ORF1ab/nsp4307A307AgcTgcC110.055556
ORF1ab/nsp4307A307AgcTgcC11AY.1010.00049
ORF1ab/nsp4307A307AgcTgcC11AY.1020.000027
ORF1ab/nsp4307A307AgcTgcC11AY.1180.000063
ORF1ab/nsp4307A307AgcTgcC11AY.120.000316
ORF1ab/nsp4307A307AgcTgcC11AY.200.000039
ORF1ab/nsp4307A307AgcTgcC11AY.260.000028
ORF1ab/nsp4307A307AgcTgcC11AY.330.000067
ORF1ab/nsp4307A307AgcTgcC11AY.390.000025
ORF1ab/nsp4307A307AgcTgcC11AY.4.20.000022
ORF1ab/nsp4307A307AgcTgcC11B0.000128
ORF1ab/nsp4307A307AgcTgcC11B.1.1.2990.012195
ORF1ab/nsp4307A307AgcTgcG11B.1.1.3060.000438
ORF1ab/nsp4307A307AgcTgcC11B.1.1.3330.001076
ORF1ab/nsp4307A307AgcTgcC11B.1.1.3370.003597
ORF1ab/nsp4307A307AgcTgcC11B.1.1.390.00051
ORF1ab/nsp4307A307AgcTgcC11B.1.177.440.000519
ORF1ab/nsp4307A307AgcTgcC11B.1.177.730.000566
ORF1ab/nsp4307A307AgcTgcC11B.1.2400.000216
ORF1ab/nsp4307A307AgcTgcC11B.1.2580.000067
ORF1ab/nsp4307A307AgcTgcC11B.1.258.170.000104
ORF1ab/nsp4307A307AgcTgcC11B.1.351.20.000303
ORF1ab/nsp4307A307AgcTgcA11B.1.360.000146
ORF1ab/nsp4307A307AgcTgcC11B.1.3890.001002
ORF1ab/nsp4307A307AgcTgcC11B.1.5240.001406
ORF1ab/nsp4307A307AgcTgcC11B.1.5260.000024
ORF1ab/nsp4307A307AgcTgcC11B.1.5950.000261
ORF1ab/nsp4307A307AgcTgcC11B.1.6120.002653
ORF1ab/nsp4307A307AgcTgcC11B.1.617.10.000129
ORF1ab/nsp4307A307AgcTgcA11B.400.000364
ORF1ab/nsp4307A307AgcTgcA11B.60.00091
ORF1ab/nsp4307A307AgcTgcC11B.6.60.000889
ORF1ab/nsp4307A307AgcTgcC11C.10.002392
ORF1ab/nsp4307A307AgcTgcG11P.1.140.000048
ORF1ab/nsp4307A307AgcTgcC11P.1.160.000374
ORF1ab/nsp4307A307AgcTgcC11P.1.170.000162
ORF1ab/nsp4307A307AgcTgcC11P.1.20.001156