CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 94 & Codon = gCc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp494V94AV2857AnonsyngTcgCc73321733200.9999868834-8836

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp494V94AgTcgCc7332073321All0.014023
ORF1ab/nsp494V94AgTcgCc4431344313AY.40.06897
ORF1ab/nsp494V94AgTcgCc93029302AY.4.20.201748
ORF1ab/nsp494V94AgTcgCc49044904B.1.617.20.018466
ORF1ab/nsp494V94AgTcgCc33723372AY.430.01494
ORF1ab/nsp494V94AgTcgCc25982598AY.50.053647
ORF1ab/nsp494V94AgTcgCc16251625AY.1200.060416
ORF1ab/nsp494V94AgTcgCc15751575AY.4.2.10.234654
ORF1ab/nsp494V94AgTcgCc11191119AY.60.046023
ORF1ab/nsp494V94AgTcgCc612612AY.46.50.121429
ORF1ab/nsp494V94AgTcgCc568568AY.1110.104029
ORF1ab/nsp494V94AgTcgCc311311AY.340.030156
ORF1ab/nsp494V94AgTcgCc310310AY.980.024489
ORF1ab/nsp494V94AgTcgCc300300AY.360.044464
ORF1ab/nsp494V94AgTcgCc210210AY.9.20.007713
ORF1ab/nsp494V94AgTcgCc160160AY.30.001591
ORF1ab/nsp494V94AgTcgCc127127AY.98.10.006151
ORF1ab/nsp494V94AgTcgCc116116AY.420.004667
ORF1ab/nsp494V94AgTcgCc101101AY.70.019796
ORF1ab/nsp494V94AgTcgCc9898AY.250.000589
ORF1ab/nsp494V94AgTcgCc9898AY.90.006624
ORF1ab/nsp494V94AgTcgCc9797AY.1090.071746
ORF1ab/nsp494V94AgTcgCc9393AY.4.50.009997
ORF1ab/nsp494V94AgTcgCc8989AY.900.060917
ORF1ab/nsp494V94AgTcgCc7373AY.1030.000453
ORF1ab/nsp494V94AgTcgCc6969AY.440.00042
ORF1ab/nsp494V94AgTcgCc6565AY.390.001606
ORF1ab/nsp494V94AgTcgCc6464AY.46.60.004621
ORF1ab/nsp494V94AgTcgCc6262AY.46.40.010199
ORF1ab/nsp494V94AgTcgCc5858AY.330.003873
ORF1ab/nsp494V94AgTcgCc5151AY.790.061743
ORF1ab/nsp494V94AgTcgCc4545AY.4.10.033186
ORF1ab/nsp494V94AgTcgCc4040AY.750.002241
ORF1ab/nsp494V94AgTcgCc3535AY.5.30.011808
ORF1ab/nsp494V94AgTcgCc3030AY.460.003122
ORF1ab/nsp494V94AgTcgCc2626AY.470.000809
ORF1ab/nsp494V94AgTcgCc2525AY.870.020816
ORF1ab/nsp494V94AgTcgCc2525B.1.1.70.000022
ORF1ab/nsp494V94AgTcgCc2424AY.1080.026461
ORF1ab/nsp494V94AgTcgCc2323B.1.1600.000717
ORF1ab/nsp494V94AgTcgCc2222AY.410.006467
ORF1ab/nsp494V94AgTcgCc2222AY.730.014637
ORF1ab/nsp494V94AgTcgCc2121AY.9.10.001758
ORF1ab/nsp494V94AgTcgCc2020AY.1210.002706
ORF1ab/nsp494V94AgTcgCc2020AY.5.40.005534
ORF1ab/nsp494V94AgTcgCc1717AY.120.10.005457
ORF1ab/nsp494V94AgTcgCc1616AY.46.30.014939
ORF1ab/nsp494V94AgTcgCc1515AY.4.40.006137
ORF1ab/nsp494V94AgTcgCc1515AY.910.010957
ORF1ab/nsp494V94AgTcgCc1414AY.1100.001578
ORF1ab/nsp494V94AgTcgCc1313AY.1020.000345
ORF1ab/nsp494V94AgTcgCc1313AY.1060.004354
ORF1ab/nsp494V94AgTcgCc1212AY.600.011257
ORF1ab/nsp494V94AgTcgCc1111AY.1180.000689
ORF1ab/nsp494V94AgTcgCc1111AY.540.001049
ORF1ab/nsp494V94AgTcgCc1111AY.940.004869
ORF1ab/nsp494V94AgTcgCc1010AY.970.017007
ORF1ab/nsp494V94AgTcgCc1010B.10.000092
ORF1ab/nsp494V94AgTcgCc99AY.1050.005788
ORF1ab/nsp494V94AgTcgCc99AY.200.00035
ORF1ab/nsp494V94AgTcgCc99AY.230.000628
ORF1ab/nsp494V94AgTcgCc99AY.46.20.005718
ORF1ab/nsp494V94AgTcgCc88AY.7.10.000902
ORF1ab/nsp494V94AgTcgCc88AY.880.007073
ORF1ab/nsp494V94AgTcgCc88B.1.20.00007
ORF1ab/nsp494V94AgTcgCc77AY.990.007345
ORF1ab/nsp494V94AgTcgCc66AY.1140.001387
ORF1ab/nsp494V94AgTcgCc66AY.4.30.005051
ORF1ab/nsp494V94AgTcgCc66AY.670.002786
ORF1ab/nsp494V94AgTcgCc66AY.680.001642
ORF1ab/nsp494V94AgTcgCc55AY.1040.009921
ORF1ab/nsp494V94AgTcgCc44AY.1190.000141
ORF1ab/nsp494V94AgTcgCc44AY.480.00186
ORF1ab/nsp494V94AgTcgCc44AY.920.001149
ORF1ab/nsp494V94AgTcgCc44B.1.1770.000053
ORF1ab/nsp494V94AgTcgCc44C.300.006908
ORF1ab/nsp494V94AgTcgCc44P.10.000063
ORF1ab/nsp494V94AgTcgCc33AY.1130.000427
ORF1ab/nsp494V94AgTcgCc33AY.116.10.000934
ORF1ab/nsp494V94AgTcgCc33AY.130.000483
ORF1ab/nsp494V94AgTcgCc33AY.260.000085
ORF1ab/nsp494V94AgTcgCc33AY.39.10.000119
ORF1ab/nsp494V94AgTcgCc33AY.610.000314
ORF1ab/nsp494V94AgTcgCc33AY.7.20.001678
ORF1ab/nsp494V94AgTcgCc33AY.700.000626
ORF1ab/nsp494V94AgTcgCc33AY.710.001425
ORF1ab/nsp494V94AgTcgCc33AY.740.000347
ORF1ab/nsp494V94AgTcgCc33AY.850.001282
ORF1ab/nsp494V94AgTcgCc33AY.890.014706
ORF1ab/nsp494V94AgTcgCc22AY.1070.000932
ORF1ab/nsp494V94AgTcgCc22AY.1160.000574
ORF1ab/nsp494V94AgTcgCc22AY.1170.000169
ORF1ab/nsp494V94AgTcgCc22AY.140.000176
ORF1ab/nsp494V94AgTcgCc22AY.270.000129
ORF1ab/nsp494V94AgTcgCc22AY.450.000243
ORF1ab/nsp494V94AgTcgCc22AY.46.10.002053
ORF1ab/nsp494V94AgTcgCc22AY.630.000774
ORF1ab/nsp494V94AgTcgCc22AY.770.002255
ORF1ab/nsp494V94AgTcgCc22AY.80.001212
ORF1ab/nsp494V94AgTcgCc22AY.860.00166
ORF1ab/nsp494V94AgTcgCc22AZ.50.007018
ORF1ab/nsp494V94AgTcgCc22B.1.10.000036
ORF1ab/nsp494V94AgTcgCc22B.1.2430.000139
ORF1ab/nsp494V94AgTcgCc22B.1.6280.000705
ORF1ab/nsp494V94AgTcgCc22D.20.00015
ORF1ab/nsp494V94AgTcgCc22P.1.120.000968
ORF1ab/nsp494V94AgTcgCc22Q.70.002222
ORF1ab/nsp494V94AgTcgCc11AY.1000.000046
ORF1ab/nsp494V94AgTcgCc11AY.120.000316
ORF1ab/nsp494V94AgTcgCc11AY.120.20.001285
ORF1ab/nsp494V94AgTcgCc11AY.210.001898
ORF1ab/nsp494V94AgTcgCc11AY.220.002092
ORF1ab/nsp494V94AgTcgCc11AY.23.10.000417
ORF1ab/nsp494V94AgTcgCc11AY.3.10.000085
ORF1ab/nsp494V94AgTcgCc11AY.320.000532
ORF1ab/nsp494V94AgTcgCc11AY.370.000316
ORF1ab/nsp494V94AgTcgCc11AY.380.000499
ORF1ab/nsp494V94AgTcgCc11AY.39.20.001541
ORF1ab/nsp494V94AgTcgCc11AY.400.000964
ORF1ab/nsp494V94AgTcgCc11AY.500.000799
ORF1ab/nsp494V94AgTcgCc11AY.520.000814
ORF1ab/nsp494V94AgTcgCc11AY.560.001605
ORF1ab/nsp494V94AgTcgCc11AY.620.000436
ORF1ab/nsp494V94AgTcgCc11AY.640.000595
ORF1ab/nsp494V94AgTcgCc11AY.650.000533
ORF1ab/nsp494V94AgTcgCc11AY.660.00107
ORF1ab/nsp494V94AgTcgCc11AY.720.001361
ORF1ab/nsp494V94AgTcgCc11AY.780.001541
ORF1ab/nsp494V94AgTcgCc11AY.820.001357
ORF1ab/nsp494V94AgTcgCc11B.1.1.2220.000204
ORF1ab/nsp494V94AgTcgCc11B.1.1.2690.001353
ORF1ab/nsp494V94AgTcgCc11B.1.1.2840.000107
ORF1ab/nsp494V94AgTcgCc11B.1.1.3620.005618
ORF1ab/nsp494V94AgTcgCc11B.1.160.160.000929
ORF1ab/nsp494V94AgTcgCc11B.1.3510.00003
ORF1ab/nsp494V94AgTcgCc11B.1.3630.012987
ORF1ab/nsp494V94AgTcgCc11B.1.3690.000285
ORF1ab/nsp494V94AgTcgCc11B.1.3980.002976
ORF1ab/nsp494V94AgTcgCc11B.1.5240.001406
ORF1ab/nsp494V94AgTcgCc11B.1.5670.003333
ORF1ab/nsp494V94AgTcgCc11B.1.5960.000087
ORF1ab/nsp494V94AgTcgCc11B.1.6120.002653
ORF1ab/nsp494V94AgTcgCc11B.1.617.10.000129
ORF1ab/nsp494V94AgTcgCc11B.1.6210.000089
ORF1ab/nsp494V94AgTcgCc11B.1.6370.000073
ORF1ab/nsp494V94AgTcgCc11B.6.60.000889
ORF1ab/nsp494V94AgTcgCc11P.1.70.000319
ORF1ab/nsp494V94AgTcgCc11Q.30.000145
ORF1ab/nsp494V94AgTcgCc11R.10.00009