CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 94

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp494V94AV2857AnonsyngTcgCc73321733200.9999868834-8836
ORF1ab/nsp494V94AV2857AnonsyngTCgCT7332110.00001363878834-8836
ORF1ab/nsp494V94VV2857VsyngtCgtT192318770.9760798834-8836
ORF1ab/nsp494V94VV2857VsyngtCgtA1923290.01508068834-8836
ORF1ab/nsp494V94VV2857VsyngtCgtG1923170.008840358834-8836
ORF1ab/nsp494V94IV2857InonsynGtcAtc37737718834-8836
ORF1ab/nsp494V94delV2857deldelGTC---11811818834-8836
ORF1ab/nsp494V94FV2857FnonsynGtcTtc11411418834-8836
ORF1ab/nsp494V94LV2857LnonsynGtcCtc1080.88834-8836
ORF1ab/nsp494V94LV2857LnonsynGtCCtT1020.28834-8836
ORF1ab/nsp494V94DV2857DnonsyngTcgAc970.7777788834-8836
ORF1ab/nsp494V94DV2857DnonsyngTCgAT920.2222228834-8836
ORF1ab/nsp494V94GV2857GnonsyngTcgGc650.8333338834-8836
ORF1ab/nsp494V94del1V2857del1delGTc-Nc620.3333338834-8836
ORF1ab/nsp494V94del1V2857del1delgtCgt-620.3333338834-8836
ORF1ab/nsp494V94del1V2857del1delGtc-tc610.1666678834-8836
ORF1ab/nsp494V94del1V2857del1delgTcg-c610.1666678834-8836
ORF1ab/nsp494V94GV2857GnonsyngTCgGA610.1666678834-8836
ORF1ab/nsp494V94HV2857HnonsynGTCCAT420.58834-8836
ORF1ab/nsp494V94HV2857HnonsynGTcCAc420.58834-8836
ORF1ab/nsp494V94SV2857SnonsynGTcAGc1118834-8836
ORF1ab/nsp494V94PV2857PnonsynGTcCCc1118834-8836

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp494V94AgTcgCc7332073321All0.014023
ORF1ab/nsp494V94AgTCgCT173321All0
ORF1ab/nsp494V94AgTcgCc4431344313AY.40.06897
ORF1ab/nsp494V94AgTcgCc93029302AY.4.20.201748
ORF1ab/nsp494V94AgTcgCc49044904B.1.617.20.018466
ORF1ab/nsp494V94AgTcgCc33723372AY.430.01494
ORF1ab/nsp494V94AgTcgCc25982598AY.50.053647
ORF1ab/nsp494V94VgtCgtT18771923All0.000359
ORF1ab/nsp494V94VgtCgtA291923All0.000006
ORF1ab/nsp494V94VgtCgtG171923All0.000003
ORF1ab/nsp494V94AgTcgCc16251625AY.1200.060416
ORF1ab/nsp494V94AgTcgCc15751575AY.4.2.10.234654
ORF1ab/nsp494V94AgTcgCc11191119AY.60.046023
ORF1ab/nsp494V94AgTcgCc612612AY.46.50.121429
ORF1ab/nsp494V94AgTcgCc568568AY.1110.104029
ORF1ab/nsp494V94VgtCgtT410410B.1.1.3740.973872
ORF1ab/nsp494V94IGtcAtc377377All0.000072
ORF1ab/nsp494V94AgTcgCc311311AY.340.030156
ORF1ab/nsp494V94AgTcgCc310310AY.980.024489
ORF1ab/nsp494V94VgtCgtT305305B.1.5510.393548
ORF1ab/nsp494V94AgTcgCc300300AY.360.044464
ORF1ab/nsp494V94VgtCgtT226233B.1.1.70.000202
ORF1ab/nsp494V94VgtCgtA5233B.1.1.70.000004
ORF1ab/nsp494V94VgtCgtG2233B.1.1.70.000002
ORF1ab/nsp494V94AgTcgCc210210AY.9.20.007713
ORF1ab/nsp494V94AgTcgCc160160AY.30.001591
ORF1ab/nsp494V94VgtCgtT147147AY.330.009816
ORF1ab/nsp494V94IGtcAtc136136AY.30.001353
ORF1ab/nsp494V94AgTcgCc127127AY.98.10.006151
ORF1ab/nsp494V94delGTC---118118All0.000023
ORF1ab/nsp494V94AgTcgCc116116AY.420.004667
ORF1ab/nsp494V94FGtcTtc114114All0.000022
ORF1ab/nsp494V94VgtCgtT113114AY.40.000176
ORF1ab/nsp494V94VgtCgtA1114AY.40.000002
ORF1ab/nsp494V94AgTcgCc101101AY.70.019796
ORF1ab/nsp494V94AgTcgCc9898AY.250.000589
ORF1ab/nsp494V94AgTcgCc9898AY.90.006624
ORF1ab/nsp494V94AgTcgCc9797AY.1090.071746
ORF1ab/nsp494V94IGtcAtc9595AY.250.000571
ORF1ab/nsp494V94AgTcgCc9393AY.4.50.009997
ORF1ab/nsp494V94AgTcgCc8989AY.900.060917
ORF1ab/nsp494V94VgtCgtT8787B.1.20.000766
ORF1ab/nsp494V94AgTcgCc7373AY.1030.000453
ORF1ab/nsp494V94AgTcgCc6969AY.440.00042
ORF1ab/nsp494V94AgTcgCc6565AY.390.001606
ORF1ab/nsp494V94AgTcgCc6464AY.46.60.004621
ORF1ab/nsp494V94AgTcgCc6262AY.46.40.010199
ORF1ab/nsp494V94AgTcgCc5858AY.330.003873
ORF1ab/nsp494V94VgtCgtT5757B.1.617.20.000215
ORF1ab/nsp494V94VgtCgtT5555B.1.36.80.055
ORF1ab/nsp494V94AgTcgCc5151AY.790.061743
ORF1ab/nsp494V94delGTC---4646B.1.1.70.000041
ORF1ab/nsp494V94AgTcgCc4545AY.4.10.033186
ORF1ab/nsp494V94AgTcgCc4040AY.750.002241
ORF1ab/nsp494V94VgtCgtT3838P.1.10.012071
ORF1ab/nsp494V94VgtCgtT3336B.10.000302
ORF1ab/nsp494V94VgtCgtA336B.10.000027
ORF1ab/nsp494V94AgTcgCc3535AY.5.30.011808
ORF1ab/nsp494V94VgtCgtT2335P.10.000362
ORF1ab/nsp494V94VgtCgtG1235P.10.000189
ORF1ab/nsp494V94IGtcAtc3434B.1.36.250.075055
ORF1ab/nsp494V94AgTcgCc3030AY.460.003122
ORF1ab/nsp494V94FGtcTtc3030B.1.1.70.000027
ORF1ab/nsp494V94FGtcTtc2727AY.40.000042
ORF1ab/nsp494V94AgTcgCc2626AY.470.000809
ORF1ab/nsp494V94AgTcgCc2525AY.870.020816
ORF1ab/nsp494V94AgTcgCc2525B.1.1.70.000022
ORF1ab/nsp494V94AgTcgCc2424AY.1080.026461
ORF1ab/nsp494V94VgtCgtT2023AY.430.000089
ORF1ab/nsp494V94VgtCgtA323AY.430.000013
ORF1ab/nsp494V94AgTcgCc2323B.1.1600.000717
ORF1ab/nsp494V94AgTcgCc2222AY.410.006467
ORF1ab/nsp494V94VgtCgtT2222AY.440.000134
ORF1ab/nsp494V94AgTcgCc2222AY.730.014637
ORF1ab/nsp494V94AgTcgCc2121AY.9.10.001758
ORF1ab/nsp494V94IGtcAtc2121B.10.000192
ORF1ab/nsp494V94AgTcgCc2020AY.1210.002706
ORF1ab/nsp494V94AgTcgCc2020AY.5.40.005534
ORF1ab/nsp494V94VgtCgtT1919B.1.10.000345
ORF1ab/nsp494V94VgtCgtT1818B.1.4290.000424
ORF1ab/nsp494V94AgTcgCc1717AY.120.10.005457
ORF1ab/nsp494V94IGtcAtc1717AY.60.000699
ORF1ab/nsp494V94VgtCgtT1616AY.140.001408
ORF1ab/nsp494V94AgTcgCc1616AY.46.30.014939
ORF1ab/nsp494V94IGtcAtc1616B.1.1.70.000014
ORF1ab/nsp494V94AgTcgCc1515AY.4.40.006137
ORF1ab/nsp494V94AgTcgCc1515AY.910.010957
ORF1ab/nsp494V94VgtCgtT1515B.1.1770.000198
ORF1ab/nsp494V94IGtcAtc1515B.1.20.000132
ORF1ab/nsp494V94VgtCgtT1515B.1.360.002189
ORF1ab/nsp494V94AgTcgCc1414AY.1100.001578
ORF1ab/nsp494V94AgTcgCc1313AY.1020.000345
ORF1ab/nsp494V94AgTcgCc1313AY.1060.004354
ORF1ab/nsp494V94AgTcgCc1212AY.600.011257
ORF1ab/nsp494V94AgTcgCc1111AY.1180.000689
ORF1ab/nsp494V94AgTcgCc1111AY.540.001049
ORF1ab/nsp494V94AgTcgCc1111AY.940.004869
ORF1ab/nsp494V94VgtCgtT1111B.1.3510.000327
ORF1ab/nsp494V94LGtcCtc810All0.000002
ORF1ab/nsp494V94LGtCCtT210All0
ORF1ab/nsp494V94FGtcTtc1010AY.430.000044
ORF1ab/nsp494V94delGTC---1010AY.430.000044
ORF1ab/nsp494V94VgtCgtT1010AY.50.000206
ORF1ab/nsp494V94AgTcgCc1010AY.970.017007
ORF1ab/nsp494V94AgTcgCc1010B.10.000092
ORF1ab/nsp494V94VgtCgtT910B.1.1.120.067164
ORF1ab/nsp494V94VgtCgtG110B.1.1.120.007463
ORF1ab/nsp494V94DgTcgAc79All0.000001
ORF1ab/nsp494V94DgTCgAT29All0
ORF1ab/nsp494V94AgTcgCc99AY.1050.005788
ORF1ab/nsp494V94AgTcgCc99AY.200.00035
ORF1ab/nsp494V94AgTcgCc99AY.230.000628
ORF1ab/nsp494V94delGTC---99AY.40.000014
ORF1ab/nsp494V94AgTcgCc99AY.46.20.005718
ORF1ab/nsp494V94VgtCgtT99B.1.1.5260.031915
ORF1ab/nsp494V94delGTC---99B.1.1770.000119
ORF1ab/nsp494V94VgtCgtT99B.1.5260.000212
ORF1ab/nsp494V94AgTcgCc88AY.7.10.000902
ORF1ab/nsp494V94AgTcgCc88AY.880.007073
ORF1ab/nsp494V94VgtCgtT88B.1.1.50.066667
ORF1ab/nsp494V94AgTcgCc88B.1.20.00007
ORF1ab/nsp494V94VgtCgtT77AY.250.000042
ORF1ab/nsp494V94AgTcgCc77AY.990.007345
ORF1ab/nsp494V94VgtCgtT67B.1.1.5190.000238
ORF1ab/nsp494V94VgtCgtA17B.1.1.5190.00004
ORF1ab/nsp494V94VgtCgtT77B.1.2580.000466
ORF1ab/nsp494V94VgtCgtT77C.370.000812
ORF1ab/nsp494V94GgTcgGc56All0.000001
ORF1ab/nsp494V94del1GTc-Nc26All0
ORF1ab/nsp494V94del1gtCgt-26All0
ORF1ab/nsp494V94GgTCgGA16All0
ORF1ab/nsp494V94del1gTcg-c16All0
ORF1ab/nsp494V94del1Gtc-tc16All0
ORF1ab/nsp494V94AgTcgCc66AY.1140.001387
ORF1ab/nsp494V94VgtCgtT66AY.1180.000376
ORF1ab/nsp494V94AgTcgCc66AY.4.30.005051
ORF1ab/nsp494V94AgTcgCc66AY.670.002786
ORF1ab/nsp494V94AgTcgCc66AY.680.001642
ORF1ab/nsp494V94VgtCgtT66B.1.1600.000187
ORF1ab/nsp494V94FGtcTtc66B.1.617.20.000023
ORF1ab/nsp494V94VgtCgtT66B.1.6210.000531
ORF1ab/nsp494V94VgtCgtT45AY.1030.000025
ORF1ab/nsp494V94VgtCgtG15AY.1030.000006
ORF1ab/nsp494V94AgTcgCc55AY.1040.009921
ORF1ab/nsp494V94VgtCgtT55AY.350.001165
ORF1ab/nsp494V94VgtCgtT55AY.390.000124
ORF1ab/nsp494V94VgtCgtT55AY.39.10.000198
ORF1ab/nsp494V94FGtcTtc55AY.4.20.000108
ORF1ab/nsp494V94delGTC---55AY.4.50.000537
ORF1ab/nsp494V94VgtCgtT55B.1.1.1920.011547
ORF1ab/nsp494V94IGtcAtc55B.1.1.4340.001743
ORF1ab/nsp494V94VgtCgtT55B.1.177.570.001405
ORF1ab/nsp494V94DgTcgAc240.111111
ORF1ab/nsp494V94DgTCgAT240.111111
ORF1ab/nsp494V94HGTCCAT240.111111
ORF1ab/nsp494V94HGTcCAc240.111111
ORF1ab/nsp494V94LGtcCtc240.111111
ORF1ab/nsp494V94LGtCCtT240.111111
ORF1ab/nsp494V94HGTCCAT24All0
ORF1ab/nsp494V94HGTcCAc24All0
ORF1ab/nsp494V94AgTcgCc44AY.1190.000141
ORF1ab/nsp494V94VgtCgtT34AY.230.000209
ORF1ab/nsp494V94VgtCgtA14AY.230.00007
ORF1ab/nsp494V94VgtCgtT44AY.30.00004
ORF1ab/nsp494V94IGtcAtc44AY.40.000006
ORF1ab/nsp494V94AgTcgCc44AY.480.00186
ORF1ab/nsp494V94VgtCgtT44AY.610.000419
ORF1ab/nsp494V94AgTcgCc44AY.920.001149
ORF1ab/nsp494V94VgtCgtT44B.1.1.4620.034483
ORF1ab/nsp494V94IGtcAtc44B.1.1770.000053
ORF1ab/nsp494V94AgTcgCc44B.1.1770.000053
ORF1ab/nsp494V94AgTcgCc44C.300.006908
ORF1ab/nsp494V94AgTcgCc44P.10.000063
ORF1ab/nsp494V94FGtcTtc33AY.1030.000019
ORF1ab/nsp494V94AgTcgCc33AY.1130.000427
ORF1ab/nsp494V94AgTcgCc33AY.116.10.000934
ORF1ab/nsp494V94AgTcgCc33AY.130.000483
ORF1ab/nsp494V94AgTcgCc33AY.260.000085
ORF1ab/nsp494V94VgtCgtT33AY.260.000085
ORF1ab/nsp494V94FGtcTtc33AY.330.0002
ORF1ab/nsp494V94AgTcgCc33AY.39.10.000119
ORF1ab/nsp494V94VgtCgtT33AY.4.20.000065
ORF1ab/nsp494V94VgtCgtA33AY.4.50.000322
ORF1ab/nsp494V94VgtCgtT33AY.470.000093
ORF1ab/nsp494V94AgTcgCc33AY.610.000314
ORF1ab/nsp494V94AgTcgCc33AY.7.20.001678
ORF1ab/nsp494V94AgTcgCc33AY.700.000626
ORF1ab/nsp494V94AgTcgCc33AY.710.001425
ORF1ab/nsp494V94AgTcgCc33AY.740.000347
ORF1ab/nsp494V94AgTcgCc33AY.850.001282
ORF1ab/nsp494V94AgTcgCc33AY.890.014706
ORF1ab/nsp494V94FGtcTtc33AY.9.20.00011
ORF1ab/nsp494V94delGTC---33B.10.000027
ORF1ab/nsp494V94VgtCgtT33B.1.1.390.001529
ORF1ab/nsp494V94VgtCgtT33B.1.1.3980.009677
ORF1ab/nsp494V94VgtCgtT33B.1.1.500.002037
ORF1ab/nsp494V94VgtCgtT33B.1.177.200.004552
ORF1ab/nsp494V94FGtcTtc33B.1.177.440.001557
ORF1ab/nsp494V94IGtcAtc33B.1.177.520.005272
ORF1ab/nsp494V94FGtcTtc33B.1.20.000026
ORF1ab/nsp494V94VgtCgtT33B.1.36.310.005254
ORF1ab/nsp494V94VgtCgtT33B.1.416.10.004687
ORF1ab/nsp494V94VgtCgtT33B.1.617.10.000387
ORF1ab/nsp494V94IGtcAtc33B.1.617.20.000011
ORF1ab/nsp494V94VgtCgtT33B.390.006993
ORF1ab/nsp494V94VgtCgtT33P.1.170.000485
ORF1ab/nsp494V94VgtCgtA33P.20.00056
ORF1ab/nsp494V94del1GTc-Nc220.111111
ORF1ab/nsp494V94VgtCgtT220.111111
ORF1ab/nsp494V94delGTC---22A.20.001324
ORF1ab/nsp494V94AgTcgCc22AY.1070.000932
ORF1ab/nsp494V94AgTcgCc22AY.1160.000574
ORF1ab/nsp494V94AgTcgCc22AY.1170.000169
ORF1ab/nsp494V94VgtCgtT22AY.1190.000071
ORF1ab/nsp494V94AgTcgCc22AY.140.000176
ORF1ab/nsp494V94FGtcTtc22AY.230.000139
ORF1ab/nsp494V94LGtcCtc22AY.230.000139
ORF1ab/nsp494V94delGTC---22AY.250.000012
ORF1ab/nsp494V94VgtCgtT22AY.270.000129
ORF1ab/nsp494V94AgTcgCc22AY.270.000129
ORF1ab/nsp494V94AgTcgCc22AY.450.000243
ORF1ab/nsp494V94AgTcgCc22AY.46.10.002053
ORF1ab/nsp494V94VgtCgtT22AY.60.000082
ORF1ab/nsp494V94AgTcgCc22AY.630.000774
ORF1ab/nsp494V94AgTcgCc22AY.770.002255
ORF1ab/nsp494V94AgTcgCc22AY.80.001212
ORF1ab/nsp494V94IGtcAtc22AY.80.001212
ORF1ab/nsp494V94AgTcgCc22AY.860.00166
ORF1ab/nsp494V94VgtCgtT22AY.9.20.000073
ORF1ab/nsp494V94AgTcgCc22AZ.50.007018
ORF1ab/nsp494V94VgtCgtT12B0.000128
ORF1ab/nsp494V94VgtCgtA12B0.000128
ORF1ab/nsp494V94AgTcgCc22B.1.10.000036
ORF1ab/nsp494V94VgtCgtT22B.1.1.10.000653
ORF1ab/nsp494V94VgtCgtT22B.1.1.1340.022727
ORF1ab/nsp494V94VgtCgtT22B.1.1.2220.000408
ORF1ab/nsp494V94VgtCgtT22B.1.1.330.000842
ORF1ab/nsp494V94DgTcgAc22B.1.1.70.000002
ORF1ab/nsp494V94IGtcAtc22B.1.177.330.003289
ORF1ab/nsp494V94delGTC---22B.1.20.000018
ORF1ab/nsp494V94AgTcgCc22B.1.2430.000139
ORF1ab/nsp494V94VgtCgtT22B.1.2650.002541
ORF1ab/nsp494V94VgtCgtA12B.1.3010.005917
ORF1ab/nsp494V94VgtCgtT12B.1.3010.005917
ORF1ab/nsp494V94VgtCgtT22B.1.3230.041667
ORF1ab/nsp494V94VgtCgtT22B.1.4700.002809
ORF1ab/nsp494V94IGtcAtc22B.1.5260.000047
ORF1ab/nsp494V94AgTcgCc22B.1.6280.000705
ORF1ab/nsp494V94AgTcgCc22D.20.00015
ORF1ab/nsp494V94AgTcgCc22P.1.120.000968
ORF1ab/nsp494V94VgtCgtT12P.1.120.000484
ORF1ab/nsp494V94VgtCgtG12P.1.120.000484
ORF1ab/nsp494V94VgtCgtT22Q.30.00029
ORF1ab/nsp494V94AgTcgCc22Q.70.002222
ORF1ab/nsp494V94VgtCgtA11A0.000387
ORF1ab/nsp494V94VgtCgtT11A.2.20.001689
ORF1ab/nsp494V94SGTcAGc11All0
ORF1ab/nsp494V94PGTcCCc11All0
ORF1ab/nsp494V94AgTcgCc11AY.1000.000046
ORF1ab/nsp494V94FGtcTtc11AY.1000.000046
ORF1ab/nsp494V94VgtCgtT11AY.1020.000027
ORF1ab/nsp494V94delGTC---11AY.1110.000183
ORF1ab/nsp494V94VgtCgtT11AY.1160.000287
ORF1ab/nsp494V94VgtCgtT11AY.116.10.000311
ORF1ab/nsp494V94IGtcAtc11AY.1170.000085
ORF1ab/nsp494V94FGtcTtc11AY.1190.000035
ORF1ab/nsp494V94IGtcAtc11AY.1190.000035
ORF1ab/nsp494V94AgTcgCc11AY.120.000316
ORF1ab/nsp494V94FGtcTtc11AY.120.000316
ORF1ab/nsp494V94VgtCgtT11AY.120.000316
ORF1ab/nsp494V94VgtCgtT11AY.1200.000037
ORF1ab/nsp494V94FGtcTtc11AY.1200.000037
ORF1ab/nsp494V94LGtcCtc11AY.1200.000037
ORF1ab/nsp494V94AgTcgCc11AY.120.20.001285
ORF1ab/nsp494V94VgtCgtA11AY.130.000161
ORF1ab/nsp494V94FGtcTtc11AY.16.10.00047
ORF1ab/nsp494V94delGTC---11AY.190.00114
ORF1ab/nsp494V94VgtCgtT11AY.20.000356
ORF1ab/nsp494V94LGtcCtc11AY.200.000039
ORF1ab/nsp494V94AgTcgCc11AY.210.001898
ORF1ab/nsp494V94AgTcgCc11AY.220.002092
ORF1ab/nsp494V94IGtcAtc11AY.230.00007
ORF1ab/nsp494V94AgTcgCc11AY.23.10.000417
ORF1ab/nsp494V94IGtcAtc11AY.290.000016
ORF1ab/nsp494V94FGtcTtc11AY.290.000016
ORF1ab/nsp494V94VgtCgtT11AY.290.000016
ORF1ab/nsp494V94AgTcgCc11AY.3.10.000085
ORF1ab/nsp494V94AgTcgCc11AY.320.000532
ORF1ab/nsp494V94VgtCgtT11AY.320.000532
ORF1ab/nsp494V94delGTC---11AY.330.000067
ORF1ab/nsp494V94VgtCgtT11AY.34.10.00051
ORF1ab/nsp494V94AgTcgCc11AY.370.000316
ORF1ab/nsp494V94AgTcgCc11AY.380.000499
ORF1ab/nsp494V94VgtCgtT11AY.380.000499
ORF1ab/nsp494V94FGtcTtc11AY.39.10.00004
ORF1ab/nsp494V94AgTcgCc11AY.39.20.001541
ORF1ab/nsp494V94LGtcCtc11AY.4.20.000022
ORF1ab/nsp494V94PGTcCCc11AY.4.20.000022
ORF1ab/nsp494V94AgTcgCc11AY.400.000964
ORF1ab/nsp494V94FGtcTtc11AY.420.00004
ORF1ab/nsp494V94VgtCgtA11AY.420.00004
ORF1ab/nsp494V94IGtcAtc11AY.420.00004
ORF1ab/nsp494V94del1gtCgt-11AY.430.000004
ORF1ab/nsp494V94IGtcAtc11AY.460.000104
ORF1ab/nsp494V94VgtCgtT11AY.460.000104
ORF1ab/nsp494V94VgtCgtT11AY.46.30.000934
ORF1ab/nsp494V94FGtcTtc11AY.46.40.000165
ORF1ab/nsp494V94VgtCgtT11AY.5.40.000277
ORF1ab/nsp494V94AgTcgCc11AY.500.000799
ORF1ab/nsp494V94AgTcgCc11AY.520.000814
ORF1ab/nsp494V94VgtCgtT11AY.540.000095
ORF1ab/nsp494V94AgTcgCc11AY.560.001605
ORF1ab/nsp494V94AgTcgCc11AY.620.000436
ORF1ab/nsp494V94AgTcgCc11AY.640.000595
ORF1ab/nsp494V94AgTcgCc11AY.650.000533
ORF1ab/nsp494V94AgTcgCc11AY.660.00107
ORF1ab/nsp494V94GgTcgGc11AY.690.000187
ORF1ab/nsp494V94VgtCgtT11AY.690.000187
ORF1ab/nsp494V94IGtcAtc11AY.7.20.000559
ORF1ab/nsp494V94SGTcAGc11AY.7.20.000559
ORF1ab/nsp494V94GgTcgGc11AY.7.20.000559
ORF1ab/nsp494V94delGTC---11AY.720.001361
ORF1ab/nsp494V94AgTcgCc11AY.720.001361
ORF1ab/nsp494V94VgtCgtT11AY.750.000056
ORF1ab/nsp494V94VgtCgtT11AY.75.10.00018
ORF1ab/nsp494V94AgTcgCc11AY.780.001541
ORF1ab/nsp494V94AgTcgCc11AY.820.001357
ORF1ab/nsp494V94FGtcTtc11AY.90.000068
ORF1ab/nsp494V94delGTC---11AY.90.000068
ORF1ab/nsp494V94delGTC---11AY.9.20.000037
ORF1ab/nsp494V94IGtcAtc11AY.950.000761
ORF1ab/nsp494V94IGtcAtc11AY.960.002075
ORF1ab/nsp494V94VgtCgtT11AY.960.002075
ORF1ab/nsp494V94VgtCgtT11AY.980.000079
ORF1ab/nsp494V94VgtCgtT11AY.98.10.000048
ORF1ab/nsp494V94GgTcgGc11AY.98.10.000048
ORF1ab/nsp494V94delGTC---11AY.99.10.001553
ORF1ab/nsp494V94IGtcAtc11B0.000128
ORF1ab/nsp494V94FGtcTtc11B.10.000009
ORF1ab/nsp494V94del1gTcg-c11B.10.000009
ORF1ab/nsp494V94delGTC---11B.1.10.000018
ORF1ab/nsp494V94FGtcTtc11B.1.10.000018
ORF1ab/nsp494V94GgTcgGc11B.1.10.000018
ORF1ab/nsp494V94VgtCgtT11B.1.1.1610.003534
ORF1ab/nsp494V94FGtcTtc11B.1.1.1740.003378
ORF1ab/nsp494V94VgtCgtA11B.1.1.1890.001513
ORF1ab/nsp494V94VgtCgtT11B.1.1.2000.007463
ORF1ab/nsp494V94AgTcgCc11B.1.1.2220.000204
ORF1ab/nsp494V94AgTcgCc11B.1.1.2690.001353
ORF1ab/nsp494V94IGtcAtc11B.1.1.2740.005051
ORF1ab/nsp494V94AgTcgCc11B.1.1.2840.000107
ORF1ab/nsp494V94delGTC---11B.1.1.3060.000438
ORF1ab/nsp494V94delGTC---11B.1.1.3110.000358
ORF1ab/nsp494V94delGTC---11B.1.1.3150.008475
ORF1ab/nsp494V94VgtCgtT11B.1.1.3340.016393
ORF1ab/nsp494V94VgtCgtT11B.1.1.3540.004386
ORF1ab/nsp494V94AgTcgCc11B.1.1.3620.005618
ORF1ab/nsp494V94VgtCgtT11B.1.1.3630.005988
ORF1ab/nsp494V94IGtcAtc11B.1.1.3690.000446
ORF1ab/nsp494V94VgtCgtT11B.1.1.370.000193
ORF1ab/nsp494V94delGTC---11B.1.1.4090.002833
ORF1ab/nsp494V94VgtCgtT11B.1.1.4370.010417
ORF1ab/nsp494V94VgtCgtT11B.1.1.4640.001473
ORF1ab/nsp494V94delGTC---11B.1.1.5190.00004
ORF1ab/nsp494V94VgtCgtT11B.1.1.560.017857
ORF1ab/nsp494V94VgtCgtT11B.1.1.630.000386
ORF1ab/nsp494V94FGtcTtc11B.1.1.700.000341
ORF1ab/nsp494V94delGTC---11B.1.1.700.000341
ORF1ab/nsp494V94VgtCgtT11B.1.140.017544
ORF1ab/nsp494V94delGTC---11B.1.1400.018868
ORF1ab/nsp494V94VgtCgtT11B.1.1570.002985
ORF1ab/nsp494V94AgTcgCc11B.1.160.160.000929
ORF1ab/nsp494V94delGTC---11B.1.160.230.004831
ORF1ab/nsp494V94FGtcTtc11B.1.1770.000013
ORF1ab/nsp494V94delGTC---11B.1.177.160.000664
ORF1ab/nsp494V94delGTC---11B.1.177.190.001431
ORF1ab/nsp494V94VgtCgtT11B.1.177.400.005155
ORF1ab/nsp494V94VgtCgtT11B.1.177.440.000519
ORF1ab/nsp494V94FGtcTtc11B.1.177.530.002392
ORF1ab/nsp494V94delGTC---11B.1.177.550.002331
ORF1ab/nsp494V94delGTC---11B.1.177.570.000281
ORF1ab/nsp494V94delGTC---11B.1.177.620.001192
ORF1ab/nsp494V94delGTC---11B.1.177.630.002703
ORF1ab/nsp494V94delGTC---11B.1.177.690.001484
ORF1ab/nsp494V94VgtCgtT11B.1.177.730.000566
ORF1ab/nsp494V94FGtcTtc11B.1.177.730.000566
ORF1ab/nsp494V94GgTCgGA11B.1.20.000009
ORF1ab/nsp494V94del1gtCgt-11B.1.20.000009
ORF1ab/nsp494V94delGTC---11B.1.221.10.002907
ORF1ab/nsp494V94VgtCgtT11B.1.2400.000216
ORF1ab/nsp494V94VgtCgtT11B.1.2410.000812
ORF1ab/nsp494V94VgtCgtT11B.1.2430.00007
ORF1ab/nsp494V94delGTC---11B.1.258.110.000396
ORF1ab/nsp494V94VgtCgtT11B.1.3110.000275
ORF1ab/nsp494V94AgTcgCc11B.1.3510.00003
ORF1ab/nsp494V94delGTC---11B.1.36.170.000494
ORF1ab/nsp494V94IGtcAtc11B.1.36.80.001
ORF1ab/nsp494V94AgTcgCc11B.1.3630.012987
ORF1ab/nsp494V94AgTcgCc11B.1.3690.000285
ORF1ab/nsp494V94VgtCgtT11B.1.3960.000706
ORF1ab/nsp494V94AgTcgCc11B.1.3980.002976
ORF1ab/nsp494V94DgTcgAc11B.1.4270.00005
ORF1ab/nsp494V94IGtcAtc11B.1.4290.000024
ORF1ab/nsp494V94IGtcAtc11B.1.4560.003268
ORF1ab/nsp494V94VgtCgtA11B.1.466.20.000391
ORF1ab/nsp494V94FGtcTtc11B.1.466.20.000391
ORF1ab/nsp494V94AgTcgCc11B.1.5240.001406
ORF1ab/nsp494V94DgTcgAc11B.1.5610.000397
ORF1ab/nsp494V94AgTcgCc11B.1.5670.003333
ORF1ab/nsp494V94VgtCgtT11B.1.5690.014493
ORF1ab/nsp494V94VgtCgtA11B.1.5880.00091
ORF1ab/nsp494V94delGTC---11B.1.5960.000087
ORF1ab/nsp494V94AgTcgCc11B.1.5960.000087
ORF1ab/nsp494V94AgTcgCc11B.1.6120.002653
ORF1ab/nsp494V94delGTC---11B.1.617.10.000129
ORF1ab/nsp494V94AgTcgCc11B.1.617.10.000129
ORF1ab/nsp494V94LGtcCtc11B.1.617.20.000004
ORF1ab/nsp494V94AgTcgCc11B.1.6210.000089
ORF1ab/nsp494V94VgtCgtT11B.1.621.10.000506
ORF1ab/nsp494V94VgtCgtT11B.1.6270.00202
ORF1ab/nsp494V94AgTcgCc11B.1.6370.000073
ORF1ab/nsp494V94DgTcgAc11B.1.6370.000073
ORF1ab/nsp494V94VgtCgtT11B.4.70.010101
ORF1ab/nsp494V94FGtcTtc11B.60.00091
ORF1ab/nsp494V94IGtcAtc11B.6.60.000889
ORF1ab/nsp494V94AgTcgCc11B.6.60.000889
ORF1ab/nsp494V94AgTCgCT11C.350.000774
ORF1ab/nsp494V94VgtCgtT11C.36.30.000567
ORF1ab/nsp494V94VgtCgtA11D.20.000075
ORF1ab/nsp494V94GgTcgGc11D.20.000075
ORF1ab/nsp494V94delGTC---11P.10.000016
ORF1ab/nsp494V94IGtcAtc11P.10.000016
ORF1ab/nsp494V94VgtCgtT11P.1.150.000232
ORF1ab/nsp494V94del1Gtc-tc11P.1.170.000162
ORF1ab/nsp494V94AgTcgCc11P.1.70.000319
ORF1ab/nsp494V94VgtCgtT11Q.10.000126
ORF1ab/nsp494V94IGtcAtc11Q.10.000126
ORF1ab/nsp494V94AgTcgCc11Q.30.000145
ORF1ab/nsp494V94AgTcgCc11R.10.00009
ORF1ab/nsp494V94delGTC---11U.30.003861