CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp4 | 492 | T492I | T3255I | nonsyn | aCc | aTc | 2471544 | 2468093 | 0.998604 | 10028-10030 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2468093 | 2471544 | All | 0.472052 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 641334 | 641652 | AY.4 | 0.998187 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 224931 | 225190 | B.1.617.2 | 0.846958 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 210426 | 210563 | AY.43 | 0.932285 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 165680 | 165751 | AY.25 | 0.996535 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 162350 | 162451 | AY.44 | 0.988186 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 160169 | 160296 | AY.103 | 0.994499 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 100004 | 100344 | AY.3 | 0.994679 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 63350 | 63368 | AY.29 | 0.999259 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 48301 | 48338 | AY.5 | 0.997378 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 46086 | 46099 | AY.4.2 | 0.999545 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 39821 | 39854 | AY.39 | 0.984036 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 37611 | 37651 | AY.102 | 0.997216 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 28203 | 28257 | AY.119 | 0.995798 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 26845 | 26853 | AY.120 | 0.998067 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 25517 | 25529 | AY.20 | 0.991722 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 24956 | 24996 | B.1.1.519 | 0.991025 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 24980 | 24983 | AY.39.1 | 0.989542 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 24624 | 24653 | AY.42 | 0.990626 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 24264 | 24270 | AY.6 | 0.997944 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 21576 | 21652 | AY.100 | 0.992639 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 20498 | 20512 | AY.98.1 | 0.992735 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 15846 | 15856 | AY.118 | 0.992733 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 14806 | 14813 | AY.33 | 0.988715 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 13909 | 13912 | AY.23 | 0.970147 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 13749 | 13782 | AY.46.6 | 0.992779 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 12440 | 12447 | AY.98 | 0.9827 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 10321 | 11712 | AY.3.1 | 0.879956 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 11579 | 11596 | AY.117 | 0.978617 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 11054 | 11083 | B.1.621 | 0.97849 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 10778 | 10782 | AY.99.2 | 0.993273 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 10259 | 10277 | AY.34 | 0.994764 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 9475 | 9478 | AY.46 | 0.986157 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 9221 | 9283 | AY.4.5 | 0.991186 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 8855 | 8857 | AY.7.1 | 0.997971 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 8557 | 8566 | C.37 | 0.993152 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 7968 | 7973 | AY.45 | 0.969579 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 7303 | 7303 | AY.121 | 0.988227 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 6898 | 6899 | AY.113 | 0.982201 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 6680 | 6688 | AY.36 | 0.99007 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 6672 | 6672 | AY.4.2.1 | 0.994041 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 6070 | 6070 | AY.46.4 | 0.998519 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 5452 | 5453 | AY.111 | 0.998535 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 5093 | 5093 | AY.7 | 0.998236 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 5033 | 5038 | AY.46.5 | 0.998611 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 4535 | 4535 | AY.29.1 | 1 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 4298 | 4298 | AY.114 | 0.993298 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 4220 | 4225 | AY.110 | 0.475547 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3659 | 3661 | AY.93 | 0.999181 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3552 | 3553 | AY.5.4 | 0.982844 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3423 | 3425 | AY.116 | 0.981646 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3391 | 3391 | AY.92 | 0.974145 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3372 | 3372 | AY.41 | 0.991182 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3230 | 3232 | B.1.575 | 0.979976 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3199 | 3202 | AY.116.1 | 0.996263 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3108 | 3108 | AY.120.1 | 0.997753 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3037 | 3037 | AY.12 | 0.959861 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2915 | 2922 | AY.106 | 0.976222 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2919 | 2922 | AY.5.3 | 0.984818 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2503 | 2506 | AY.1 | 0.990503 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2437 | 2437 | AY.4.4 | 0.997136 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2395 | 2396 | AY.23.1 | 0.999583 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2306 | 2307 | AY.85 | 0.985049 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2247 | 2251 | AY.94 | 0.994688 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2248 | 2248 | AY.84 | 0.983377 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2137 | 2139 | AY.107 | 0.995806 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2026 | 2026 | AY.101 | 0.993624 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2002 | 2002 | AY.120.2.1 | 0.997509 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1967 | 1967 | B.1.621.1 | 0.994942 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1959 | 1965 | A.2.5 | 0.977545 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1925 | 1927 | AY.34.1 | 0.981642 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1824 | 1826 | AY.32 | 0.971246 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1776 | 1776 | AY.7.2 | 0.993289 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1495 | 1496 | AY.46.2 | 0.949809 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1489 | 1490 | AY.9.2 | 0.05469 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1472 | 1474 | AY.105 | 0.946624 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1449 | 1450 | AY.90 | 0.991786 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1377 | 1377 | AY.39.1.1 | 0.997826 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1356 | 1357 | AY.4.1 | 1 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1340 | 1340 | AY.109 | 0.991124 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1337 | 1337 | AY.91 | 0.976625 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1265 | 1269 | AY.95 | 0.962709 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1243 | 1249 | B.1.1.222 | 0.25357 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1180 | 1180 | AY.87 | 0.982515 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1175 | 1177 | AY.4.3 | 0.989057 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1163 | 1163 | AY.86 | 0.965145 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1146 | 1151 | B.1 | 0.010497 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1103 | 1105 | AY.88 | 0.975243 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1067 | 1071 | AY.46.3 | 0.996265 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1023 | 1023 | AY.47 | 0.031821 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 948 | 949 | AY.99 | 0.994753 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 946 | 946 | AY.46.1 | 0.971253 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 881 | 881 | AY.80 | 0.994357 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 838 | 838 | AY.77 | 0.944758 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 815 | 818 | AY.79 | 0.986683 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 786 | 787 | AY.26 | 0.022252 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 763 | 764 | AY.108 | 0.841235 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 759 | 759 | B.1.1.7 | 0.000679 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 724 | 724 | AY.82 | 0.982361 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 715 | 715 | AY.120.2 | 0.919023 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 649 | 649 | AY.39.2 | 1 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 625 | 625 | A.2.5.2 | 0.982704 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 619 | 619 | AY.78 | 0.953775 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 614 | 614 | AY.73 | 0.408516 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 586 | 586 | AY.99.1 | 0.909938 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 581 | 582 | AY.97 | 0.988095 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 576 | 576 | AY.83 | 0.993103 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 521 | 521 | AY.75 | 0.029188 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 503 | 503 | B.1.1 | 0.009125 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 490 | 490 | AY.81 | 0.976096 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 487 | 487 | AY.68 | 0.133315 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 473 | 473 | AY.104 | 0.938492 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 472 | 472 | AY.21 | 0.895636 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 470 | 470 | AY.22 | 0.983264 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 463 | 463 | AY.96 | 0.960581 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 447 | 448 | AY.55 | 0.410092 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 412 | 413 | AY.74 | 0.047647 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 406 | 406 | AY.5.2 | 1 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 394 | 394 | B.1.575.1 | 0.960976 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 377 | 377 | AY.54 | 0.035946 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 367 | 367 | C.37.1 | 0.960733 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 307 | 308 | P.6 | 0.965409 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 290 | 290 | AY.59 | 0.153602 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 287 | 287 | B | 0.036682 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 282 | 282 | AY.58 | 0.255898 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 281 | 281 | AY.19 | 0.32041 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 266 | 266 | AY.5.1 | 1 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 256 | 256 | B.1.177.33 | 0.421053 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 245 | 245 | AY.91.1 | 0.995935 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 223 | 224 | AY.53 | 0.064117 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 220 | 220 | AY.75.1 | 0.039668 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 213 | 213 | B.1.241 | 0.17289 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 208 | 208 | B.1.575.2 | 1 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 206 | 206 | A.2.5.1 | 0.990385 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 206 | 206 | AY.76 | 0.995169 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 204 | 204 | AY.89 | 1 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 194 | 194 | AY.62 | 0.084532 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 192 | 192 | AY.115 | 1 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 192 | 192 | B.1.2 | 0.001691 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 182 | 182 | AY.69 | 0.033974 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 180 | 180 | P.2 | 0.033595 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 179 | 179 | B.1.234 | 0.023618 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 176 | 176 | AT.1 | 0.902564 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 174 | 174 | AY.67 | 0.08078 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 171 | 171 | AY.64 | 0.101786 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 166 | 166 | AY.52 | 0.135179 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 159 | 159 | AY.14 | 0.013994 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 154 | 155 | AY.10 | 0.081611 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 153 | 153 | AY.37 | 0.048357 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 147 | 149 | AY.56 | 0.235955 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 138 | 138 | B.1.549 | 0.992806 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 132 | 132 | AY.16 | 0.050114 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 132 | 132 | B.1.632 | 0.885906 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 131 | 131 | AY.63 | 0.050677 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 109 | 109 | AY.57 | 0.071522 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 105 | 105 | AY.13 | 0.016903 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 94 | 94 | A.2.5.3 | 0.969072 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 94 | 94 | AY.40 | 0.090646 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 93 | 93 | B.1.603 | 0.989362 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 85 | 85 | AY.48 | 0.039535 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 78 | 78 | AY.35 | 0.018178 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 77 | 77 | B.1.1.221 | 0.777778 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 76 | 76 | AY.70 | 0.015847 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 73 | 73 | B.1.1.326 | 0.128521 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 72 | 72 | B.1.1.28 | 0.022409 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 63 | 63 | AY.60 | 0.059099 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 56 | 56 | AY.71 | 0.026603 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 55 | 55 | B.1.258 | 0.00366 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 54 | 54 | AY.11 | 0.072289 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 52 | 52 | AY.65 | 0.027719 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 52 | 52 | B.1.623 | 0.027897 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 50 | 50 | AY.38 | 0.024963 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 46 | 46 | B.1.177 | 0.000606 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 42 | 42 | B.1.427 | 0.002121 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 30 | 40 | B.1.243 | 0.002088 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 39 | 39 | AY.50 | 0.031175 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 37 | 37 | P.1 | 0.000583 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 35 | 35 | B.1.596 | 0.00305 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 34 | 34 | AE.8 | 0.016626 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 34 | 34 | AY.49 | 0.108626 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 34 | 34 | AY.61 | 0.003562 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 34 | 34 | B.1.617.1 | 0.004385 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 33 | 33 | B.1.128 | 0.020966 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 31 | 31 | AY.24 | 0.013362 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 30 | 30 | AY.17 | 0.245902 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 26 | 26 | B.1.1.161 | 0.091873 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 26 | 26 | B.1.595 | 0.006785 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 25 | 25 | B.1.1.306 | 0.01096 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 25 | 25 | B.1.576 | 0.022665 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 23 | 23 | A | 0.008901 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 23 | 23 | AY.51 | 0.020909 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 23 | 23 | B.1.351 | 0.000684 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 22 | 22 | AY.28 | 0.041588 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 22 | 22 | AY.30 | 0.008706 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 22 | 22 | B.1.126 | 0.028061 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 20 | 20 | AY.9 | 0.001352 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 19 | 19 | B.1.22 | 0.025033 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 18 | 18 | B.1.633 | 0.75 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 17 | 17 | B.1.179 | 0.06391 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 17 | 17 | B.1.525 | 0.001924 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 16 | 16 | AY.8 | 0.009697 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 15 | 15 | AY.66 | 0.016043 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 15 | 15 | B.1.1.1 | 0.0049 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 15 | 15 | B.1.1.216 | 0.013357 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 15 | 15 | B.1.429 | 0.000353 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 15 | 15 | B.1.497 | 0.004721 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 14 | 14 | AY.9.1 | 0.001172 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 14 | 14 | C.32 | 0.325581 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 13 | 13 | AY.72 | 0.017687 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 13 | 13 | B.1.177.73 | 0.007361 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 13 | 13 | B.1.526 | 0.000306 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 12 | 12 | AY.27 | 0.000777 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 12 | 12 | B.1.1.526 | 0.042553 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 12 | 12 | B.1.503 | 0.029851 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 12 | 12 | N.4 | 0.051064 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 12 | 12 | P.1.14 | 0.000574 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 11 | 11 | AY.16.1 | 0.005169 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 11 | 11 | B.1.1.333 | 0.011841 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 11 | 11 | B.1.540 | 0.106796 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 11 | 11 | B.1.628 | 0.003876 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 11 | 11 | B.1.637 | 0.000804 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 10 | 10 | AY.2 | 0.003561 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 10 | 10 | B.1.1.348 | 0.007962 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 10 | 10 | B.1.221 | 0.00071 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 9 | 9 | B.1.1.220 | 0.016729 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 9 | 9 | B.1.1.33 | 0.003788 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 9 | 9 | B.1.36 | 0.001313 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 8 | 8 | B.1.1.274 | 0.040404 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 8 | 8 | B.1.1.317 | 0.003294 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 8 | 8 | B.1.1.528 | 0.038462 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 8 | 8 | B.1.160 | 0.00025 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 8 | 8 | B.1.349 | 0.005718 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 8 | 8 | B.1.361 | 0.010309 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 8 | 8 | P.1.1 | 0.002541 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 8 | 8 | P.1.15 | 0.001859 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 7 | 7 | B.1.617.3 | 0.020896 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 7 | 7 | P.1.12 | 0.003388 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 7 | 7 | Q.8 | 0.001154 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 6 | 6 | A.5 | 0.011538 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 6 | 6 | B.1.1.372 | 0.004132 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 6 | 6 | B.1.1.485 | 0.1 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 6 | 6 | B.1.474 | 0.011407 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 6 | 6 | B.1.530 | 0.042857 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 5 | 5 | B.1.1.320 | 0.090909 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 5 | 5 | B.1.1.523 | 0.007812 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 5 | 5 | B.1.157 | 0.014925 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 5 | 5 | B.1.177.16 | 0.003322 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 5 | 5 | B.1.177.81 | 0.000947 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 5 | 5 | C.39 | 0.09434 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 4 | 4 | B.1.1.171 | 0.014706 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 4 | 4 | B.1.1.288 | 0.007663 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 4 | 4 | B.1.1.337 | 0.014388 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 4 | 4 | B.1.1.37 | 0.000771 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 4 | 4 | B.1.1.432 | 0.005063 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 4 | 4 | B.1.1.464 | 0.005891 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 4 | 4 | B.1.1.99 | 0.095238 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 4 | 4 | B.1.210 | 0.008529 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 4 | 4 | B.1.214 | 0.014652 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 4 | 4 | B.1.239 | 0.004884 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 4 | 4 | B.1.240 | 0.000862 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 4 | 4 | B.1.311 | 0.001098 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 4 | 4 | B.1.375 | 0.003279 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 4 | 4 | B.1.533 | 0.038462 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 4 | 4 | B.1.609 | 0.001918 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 4 | 4 | C.26 | 0.029412 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3 | 3 | AU.3 | 0.006329 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3 | 3 | B.1.1.198 | 0.004405 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3 | 3 | B.1.1.236 | 0.02069 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3 | 3 | B.1.1.517 | 0.020408 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3 | 3 | B.1.258.17 | 0.000312 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3 | 3 | B.1.36.29 | 0.001552 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3 | 3 | B.1.380 | 0.019868 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3 | 3 | B.1.400 | 0.001287 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3 | 3 | B.1.580 | 0.012195 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3 | 3 | B.1.629 | 0.04 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3 | 3 | B.1.93 | 0.002801 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3 | 3 | B.4 | 0.006623 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3 | 3 | C.1 | 0.007177 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3 | 3 | C.35 | 0.002322 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3 | 3 | P.1.16 | 0.001122 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3 | 3 | P.1.17 | 0.000485 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3 | 3 | Q.1 | 0.000379 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 3 | 3 | R.1 | 0.00027 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | 0.111111 | |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | A.2 | 0.001324 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | A.2.4 | 0.006734 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | A.25 | 0.036364 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.1.10 | 0.00223 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.1.158 | 0.02439 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.1.160 | 0.047619 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.1.200 | 0.014925 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.1.25 | 0.001137 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.1.265 | 0.006309 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.1.269 | 0.002706 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.1.284 | 0.000215 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.1.294 | 0.002532 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.1.322 | 0.017544 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.1.397 | 0.004505 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.1.448 | 0.004065 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.1.507 | 0.017391 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.1.63 | 0.000772 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.1.83 | 0.00542 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.143 | 0.042553 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.160.16 | 0.001859 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.177.21 | 0.000153 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.177.86 | 0.000367 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.335 | 0.020619 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.367 | 0.001585 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.378 | 0.013699 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.399 | 0.003868 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.433 | 0.00639 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.436 | 0.002058 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.485 | 0.029851 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.551 | 0.002581 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.562 | 0.037037 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.565 | 0.001621 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.577 | 0.001375 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.604 | 0.034483 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.1.636 | 0.013423 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | B.55 | 0.0059 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | C.36.3 | 0.001134 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | C.36.3.1 | 0.005435 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | P.1.7 | 0.000639 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 2 | 2 | Q.3 | 0.00029 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | AU.2 | 0.002421 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | AW.1 | 0.003049 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | AY.15 | 0.002222 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | AY.18 | 0.010101 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | AY.31 | 0.018519 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.121 | 0.002427 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.174 | 0.003378 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.175 | 0.076923 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.204 | 0.00304 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.210 | 0.005714 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.231 | 0.003096 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.254 | 0.011236 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.261 | 0.008621 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.273 | 0.006757 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.277 | 0.000759 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.301 | 0.001179 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.304 | 0.002809 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.305 | 0.003861 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.312 | 0.001912 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.344 | 0.010753 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.370 | 0.012658 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.387 | 0.058824 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.389 | 0.006061 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.44 | 0.00241 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.458 | 0.041667 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.486 | 0.001577 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.487 | 0.005587 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.515 | 0.02 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.54 | 0.003021 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.103 | 0.019231 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.142 | 0.002899 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.177.42 | 0.000894 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.177.67 | 0.007634 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.177.89 | 0.02439 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.189 | 0.004292 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.199 | 0.004132 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.208 | 0.04 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.218 | 0.005155 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.247 | 0.014925 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.258.12 | 0.007874 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.260 | 0.003344 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.301 | 0.005917 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.305 | 0.002151 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.314 | 0.007519 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.323 | 0.020833 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.325 | 0.006897 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.336 | 0.002439 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.356 | 0.001727 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.36.26 | 0.002857 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.362 | 0.001541 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.366 | 0.004878 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.377 | 0.004566 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.404 | 0.001302 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.426 | 0.001009 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.438 | 0.006536 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.450 | 0.011364 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.476 | 0.1 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.537 | 0.02 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.550 | 0.013699 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.568 | 0.001111 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.581 | 0.009434 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.586 | 0.010989 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.588 | 0.00091 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.599 | 0.00365 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.600 | 0.005848 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.631 | 0.003367 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.634 | 0.003425 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.638 | 0.052632 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.70 | 0.02439 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.78 | 0.008547 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.1.9.5 | 0.005682 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.23 | 0.002924 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.3 | 0.000831 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.4.1 | 0.018868 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | C.11 | 0.010638 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | C.14 | 0.004329 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | C.18 | 0.002591 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | L.4 | 0.05 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | P.1.13 | 0.000898 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | P.7 | 0.004367 |
ORF1ab/nsp4 | 492 | T492I | aCc | aTc | 1 | 1 | W.4 | 0.001351 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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