CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 477 & Codon = gaT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4477D477DD3240DsyngaCgaT1927192719983-9985

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4477D477DgaCgaT19271927All0.000369
ORF1ab/nsp4477D477DgaCgaT364364B.1.1.70.000326
ORF1ab/nsp4477D477DgaCgaT361361AY.40.000562
ORF1ab/nsp4477D477DgaCgaT149149B.1.617.20.000561
ORF1ab/nsp4477D477DgaCgaT126126AY.1030.000782
ORF1ab/nsp4477D477DgaCgaT115115B.1.1.5190.004567
ORF1ab/nsp4477D477DgaCgaT106106AY.3.10.009037
ORF1ab/nsp4477D477DgaCgaT7777AY.440.000469
ORF1ab/nsp4477D477DgaCgaT5757B.1.4290.001341
ORF1ab/nsp4477D477DgaCgaT5151AY.30.000507
ORF1ab/nsp4477D477DgaCgaT3838B.1.177.90.050599
ORF1ab/nsp4477D477DgaCgaT3232AY.610.003353
ORF1ab/nsp4477D477DgaCgaT2929AY.430.000128
ORF1ab/nsp4477D477DgaCgaT2525AY.390.000618
ORF1ab/nsp4477D477DgaCgaT2525P.10.000394
ORF1ab/nsp4477D477DgaCgaT2323AY.410.006761
ORF1ab/nsp4477D477DgaCgaT2121AY.200.000816
ORF1ab/nsp4477D477DgaCgaT2121AY.250.000126
ORF1ab/nsp4477D477DgaCgaT2020AY.260.000566
ORF1ab/nsp4477D477DgaCgaT1717B.1.20.00015
ORF1ab/nsp4477D477DgaCgaT1313B.10.000119
ORF1ab/nsp4477D477DgaCgaT1212B.1.1770.000158
ORF1ab/nsp4477D477DgaCgaT99AY.1020.000239
ORF1ab/nsp4477D477DgaCgaT88AY.750.000448
ORF1ab/nsp4477D477DgaCgaT88B.1.1600.00025
ORF1ab/nsp4477D477DgaCgaT77AY.1060.002344
ORF1ab/nsp4477D477DgaCgaT77B.1.5960.00061
ORF1ab/nsp4477D477DgaCgaT77R.10.00063
ORF1ab/nsp4477D477DgaCgaT66AY.990.006296
ORF1ab/nsp4477D477DgaCgaT66C.370.000696
ORF1ab/nsp4477D477DgaCgaT55AY.340.000485
ORF1ab/nsp4477D477DgaCgaT55AY.75.10.000902
ORF1ab/nsp4477D477DgaCgaT55AY.99.20.000461
ORF1ab/nsp4477D477DgaCgaT55B.1.1.10.001633
ORF1ab/nsp4477D477DgaCgaT55B.1.2430.000348
ORF1ab/nsp4477D477DgaCgaT55B.1.3510.000149
ORF1ab/nsp4477D477DgaCgaT55B.1.5260.000118
ORF1ab/nsp4477D477DgaCgaT44AY.470.000124
ORF1ab/nsp4477D477DgaCgaT44AY.680.001095
ORF1ab/nsp4477D477DgaCgaT44AY.740.000463
ORF1ab/nsp4477D477DgaCgaT44B.1.10.000073
ORF1ab/nsp4477D477DgaCgaT44B.1.2580.000266
ORF1ab/nsp4477D477DgaCgaT44C.36.30.002269
ORF1ab/nsp4477D477DgaCgaT33AY.230.000209
ORF1ab/nsp4477D477DgaCgaT33AY.4.20.000065
ORF1ab/nsp4477D477DgaCgaT33AY.450.000365
ORF1ab/nsp4477D477DgaCgaT33AY.530.000863
ORF1ab/nsp4477D477DgaCgaT33AY.770.003382
ORF1ab/nsp4477D477DgaCgaT33B.1.1.280.000934
ORF1ab/nsp4477D477DgaCgaT33B.1.177.440.001557
ORF1ab/nsp4477D477DgaCgaT33B.1.466.20.001174
ORF1ab/nsp4477D477DgaCgaT33B.1.617.10.000387
ORF1ab/nsp4477D477DgaCgaT33P.1.100.000808
ORF1ab/nsp4477D477DgaCgaT33P.20.00056
ORF1ab/nsp4477D477DgaCgaT22AY.1000.000092
ORF1ab/nsp4477D477DgaCgaT22AY.1100.000225
ORF1ab/nsp4477D477DgaCgaT22AY.1130.000285
ORF1ab/nsp4477D477DgaCgaT22AY.1190.000071
ORF1ab/nsp4477D477DgaCgaT22AY.290.000032
ORF1ab/nsp4477D477DgaCgaT22AY.420.00008
ORF1ab/nsp4477D477DgaCgaT22AY.460.000208
ORF1ab/nsp4477D477DgaCgaT22AY.9.10.000167
ORF1ab/nsp4477D477DgaCgaT22B.1.1.1600.047619
ORF1ab/nsp4477D477DgaCgaT22B.1.177.600.000437
ORF1ab/nsp4477D477DgaCgaT22B.1.351.30.001753
ORF1ab/nsp4477D477DgaCgaT22B.1.4270.000101
ORF1ab/nsp4477D477DgaCgaT22B.1.6210.000177
ORF1ab/nsp4477D477DgaCgaT22B.1.6370.000146
ORF1ab/nsp4477D477DgaCgaT22Q.80.00033
ORF1ab/nsp4477D477DgaCgaT11A0.000387
ORF1ab/nsp4477D477DgaCgaT11A.210.00277
ORF1ab/nsp4477D477DgaCgaT11A.23.10.000704
ORF1ab/nsp4477D477DgaCgaT11AY.100.00053
ORF1ab/nsp4477D477DgaCgaT11AY.1010.00049
ORF1ab/nsp4477D477DgaCgaT11AY.1090.00074
ORF1ab/nsp4477D477DgaCgaT11AY.1170.000085
ORF1ab/nsp4477D477DgaCgaT11AY.130.000161
ORF1ab/nsp4477D477DgaCgaT11AY.160.00038
ORF1ab/nsp4477D477DgaCgaT11AY.16.10.00047
ORF1ab/nsp4477D477DgaCgaT11AY.320.000532
ORF1ab/nsp4477D477DgaCgaT11AY.380.000499
ORF1ab/nsp4477D477DgaCgaT11AY.50.000021
ORF1ab/nsp4477D477DgaCgaT11AY.510.000909
ORF1ab/nsp4477D477DgaCgaT11AY.560.001605
ORF1ab/nsp4477D477DgaCgaT11AY.570.000656
ORF1ab/nsp4477D477DgaCgaT11AY.580.000907
ORF1ab/nsp4477D477DgaCgaT11AY.590.00053
ORF1ab/nsp4477D477DgaCgaT11AY.60.000041
ORF1ab/nsp4477D477DgaCgaT11AY.650.000533
ORF1ab/nsp4477D477DgaCgaT11AY.7.10.000113
ORF1ab/nsp4477D477DgaCgaT11AY.820.001357
ORF1ab/nsp4477D477DgaCgaT11AY.850.000427
ORF1ab/nsp4477D477DgaCgaT11AY.860.00083
ORF1ab/nsp4477D477DgaCgaT11AY.90.000068
ORF1ab/nsp4477D477DgaCgaT11AY.9.2.10.001976
ORF1ab/nsp4477D477DgaCgaT11AY.980.000079
ORF1ab/nsp4477D477DgaCgaT11AY.98.10.000048
ORF1ab/nsp4477D477DgaCgaT11AZ.10.000867
ORF1ab/nsp4477D477DgaCgaT11B.1.1.1530.001095
ORF1ab/nsp4477D477DgaCgaT11B.1.1.2220.000204
ORF1ab/nsp4477D477DgaCgaT11B.1.1.2890.002083
ORF1ab/nsp4477D477DgaCgaT11B.1.1.3170.000412
ORF1ab/nsp4477D477DgaCgaT11B.1.1.330.000421
ORF1ab/nsp4477D477DgaCgaT11B.1.1.3720.000689
ORF1ab/nsp4477D477DgaCgaT11B.1.110.30.000718
ORF1ab/nsp4477D477DgaCgaT11B.1.1260.001276
ORF1ab/nsp4477D477DgaCgaT11B.1.160.160.000929
ORF1ab/nsp4477D477DgaCgaT11B.1.177.170.000821
ORF1ab/nsp4477D477DgaCgaT11B.1.177.450.000381
ORF1ab/nsp4477D477DgaCgaT11B.1.177.50.001242
ORF1ab/nsp4477D477DgaCgaT11B.1.177.70.000165
ORF1ab/nsp4477D477DgaCgaT11B.1.177.800.001912
ORF1ab/nsp4477D477DgaCgaT11B.1.177.860.000183
ORF1ab/nsp4477D477DgaCgaT11B.1.2210.000071
ORF1ab/nsp4477D477DgaCgaT11B.1.2230.002778
ORF1ab/nsp4477D477DgaCgaT11B.1.2340.000132
ORF1ab/nsp4477D477DgaCgaT11B.1.2810.021739
ORF1ab/nsp4477D477DgaCgaT11B.1.351.50.0006
ORF1ab/nsp4477D477DgaCgaT11B.1.36.10.00114
ORF1ab/nsp4477D477DgaCgaT11B.1.36.220.001208
ORF1ab/nsp4477D477DgaCgaT11B.1.4090.000781
ORF1ab/nsp4477D477DgaCgaT11B.1.4970.000315
ORF1ab/nsp4477D477DgaCgaT11B.1.5250.000113
ORF1ab/nsp4477D477DgaCgaT11B.1.5520.015152
ORF1ab/nsp4477D477DgaCgaT11B.1.5650.00081
ORF1ab/nsp4477D477DgaCgaT11B.1.5950.000261
ORF1ab/nsp4477D477DgaCgaT11B.1.5970.00463
ORF1ab/nsp4477D477DgaCgaT11B.460.020833
ORF1ab/nsp4477D477DgaCgaT11B.60.00091
ORF1ab/nsp4477D477DgaCgaT11B.6.60.000889
ORF1ab/nsp4477D477DgaCgaT11D.20.000075
ORF1ab/nsp4477D477DgaCgaT11P.1.170.000162
ORF1ab/nsp4477D477DgaCgaT11P.1.70.000319
ORF1ab/nsp4477D477DgaCgaT11Q.10.000126