CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 46 & Codon = tTc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp446Y46FY2809FnonsyntActTc323218690-8692

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp446Y46FtActTc3232All0.000006
ORF1ab/nsp446Y46FtActTc1010B.1.1.70.000009
ORF1ab/nsp446Y46FtActTc99B.1.5090.007792
ORF1ab/nsp446Y46FtActTc22P.10.000032
ORF1ab/nsp446Y46FtActTc11AY.1020.000027
ORF1ab/nsp446Y46FtActTc11AY.1030.000006
ORF1ab/nsp446Y46FtActTc11AY.230.00007
ORF1ab/nsp446Y46FtActTc11AY.250.000006
ORF1ab/nsp446Y46FtActTc11AY.340.000097
ORF1ab/nsp446Y46FtActTc11AY.40.000002
ORF1ab/nsp446Y46FtActTc11AY.470.000031
ORF1ab/nsp446Y46FtActTc11B.1.1600.000031
ORF1ab/nsp446Y46FtActTc11B.1.20.000009
ORF1ab/nsp446Y46FtActTc11B.1.4270.00005
ORF1ab/nsp446Y46FtActTc11B.1.5650.00081