CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 446 & Codon = gTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4446A446VA3209VnonsyngCtgTt3279963279580.9998849890-9892

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4446A446VgCtgTt327958327996All0.062726
ORF1ab/nsp4446A446VgCtgTt3505535055AY.260.992413
ORF1ab/nsp4446A446VgCtgTt3115331155AY.470.969019
ORF1ab/nsp4446A446VgCtgTt3041530415B.1.617.20.114525
ORF1ab/nsp4446A446VgCtgTt2320323203AY.9.20.852237
ORF1ab/nsp4446A446VgCtgTt1655516555AY.750.927451
ORF1ab/nsp4446A446VgCtgTt1542615426AY.270.998382
ORF1ab/nsp4446A446VgCtgTt1476614766AY.90.998107
ORF1ab/nsp4446A446VgCtgTt1359613596B.1.6370.993497
ORF1ab/nsp4446A446VgCtgTt1190111901AY.9.10.9964
ORF1ab/nsp4446A446VgCtgTt1122811228AY.140.988206
ORF1ab/nsp4446A446VgCtgTt1006010060AY.540.959191
ORF1ab/nsp4446A446VgCtgTt94739473AY.610.992561
ORF1ab/nsp4446A446VgCtgTt82578257AY.740.954898
ORF1ab/nsp4446A446VgCtgTt59465946AY.130.95718
ORF1ab/nsp4446A446VgCtgTt51955195AY.75.10.936711
ORF1ab/nsp4446A446VgCtgTt51735173AY.690.965652
ORF1ab/nsp4446A446VgCtgTt46994699AY.700.979775
ORF1ab/nsp4446A446VgCtgTt32863286B.1.1.3180.991551
ORF1ab/nsp4446A446VgCtgTt32353235AY.530.930132
ORF1ab/nsp4446A446VgCtgTt29842984AY.370.94311
ORF1ab/nsp4446A446VgCtgTt29652965AY.680.811662
ORF1ab/nsp4446A446VgCtgTt27992799AY.20.996795
ORF1ab/nsp4446A446VgCtgTt27622770B.1.1.70.002473
ORF1ab/nsp4446A446VgCtgTt24862486AY.160.943812
ORF1ab/nsp4446A446VgCtgTt24522452AY.630.948549
ORF1ab/nsp4446A446VgCtgTt24042404AY.300.951326
ORF1ab/nsp4446A446VgCtgTt22652265AY.240.976293
ORF1ab/nsp4446A446VgCtgTt21242124AY.620.92549
ORF1ab/nsp4446A446VgCtgTt20212021AY.710.960095
ORF1ab/nsp4446A446VgCtgTt19761976AY.670.917363
ORF1ab/nsp4446A446VgCtgTt18191819AY.650.969616
ORF1ab/nsp4446A446VgCtgTt17321732AY.100.917859
ORF1ab/nsp4446A446VgCtgTt17211721AY.380.859211
ORF1ab/nsp4446A446VgCtgTt16351635AY.80.990909
ORF1ab/nsp4446A446VgCtgTt15171517AY.590.803496
ORF1ab/nsp4446A446VgCtgTt15021502AY.640.894048
ORF1ab/nsp4446A446VgCtgTt14731473B.10.013492
ORF1ab/nsp4446A446VgCtgTt14181419AY.16.10.666353
ORF1ab/nsp4446A446VgCtgTt14151415AY.570.928478
ORF1ab/nsp4446A446VgCtgTt13101310P.10.020638
ORF1ab/nsp4446A446VgCtgTt12181218AZ.21
ORF1ab/nsp4446A446VgCtgTt12031203AY.500.961631
ORF1ab/nsp4446A446VgCtgTt11531153AZ.11
ORF1ab/nsp4446A446VgCtgTt10741074AY.510.976364
ORF1ab/nsp4446A446VgCtgTt10001000AY.600.938086
ORF1ab/nsp4446A446VgCtgTt921921AY.400.888139
ORF1ab/nsp4446A446VgCtgTt890890AY.730.592149
ORF1ab/nsp4446A446VgCtgTt876876AY.660.936898
ORF1ab/nsp4446A446VgCtgTt822822AY.520.669381
ORF1ab/nsp4446A446VgCtgTt813813AY.580.73775
ORF1ab/nsp4446A446VgCtgTt755763B.1.10.013696
ORF1ab/nsp4446A446VgCtgTt730733AY.440.004443
ORF1ab/nsp4446A446VgCtgTt727727AY.430.003221
ORF1ab/nsp4446A446VgCtgTt714714AY.720.971429
ORF1ab/nsp4446A446VgCtgTt693693AY.110.927711
ORF1ab/nsp4446A446VgCtgTt657657AZ.30.99848
ORF1ab/nsp4446A446VgCtgTt621621AY.550.569725
ORF1ab/nsp4446A446VgCtgTt551551AY.190.628278
ORF1ab/nsp4446A446VgCtgTt506506AY.9.2.11
ORF1ab/nsp4446A446VgCtgTt481481AY.280.909263
ORF1ab/nsp4446A446VgCtgTt463463AY.560.743178
ORF1ab/nsp4446A446VgCtgTt448448AY.150.995556
ORF1ab/nsp4446A446VgCtgTt349349AY.200.013564
ORF1ab/nsp4446A446VgCtgTt314314B.1.1.2860.910145
ORF1ab/nsp4446A446VgCtgTt302302AY.480.140465
ORF1ab/nsp4446A446VgCtgTt297297AZ.40.996644
ORF1ab/nsp4446A446VgCtgTt285285AZ.51
ORF1ab/nsp4446A446VgCtgTt281281AY.490.897764
ORF1ab/nsp4446A446VgCtgTt261261AY.390.00645
ORF1ab/nsp4446A446VgCtgTt240240AY.40.000374
ORF1ab/nsp4446A446VgCtgTt221221AY.1030.001372
ORF1ab/nsp4446A446VgCtgTt215215AY.290.003391
ORF1ab/nsp4446A446VgCtgTt209209P.1.81
ORF1ab/nsp4446A446VgCtgTt202203AY.250.001215
ORF1ab/nsp4446A446VgCtgTt203203P.1.90.975962
ORF1ab/nsp4446A446VgCtgTt196196AV.10.989899
ORF1ab/nsp4446A446VgCtgTt192192B.1.3510.005707
ORF1ab/nsp4446A446VgCtgTt189189B.1.6300.989529
ORF1ab/nsp4446A446VgCtgTt182182A.290.968085
ORF1ab/nsp4446A446VgCtgTt179179B.1.110.30.128592
ORF1ab/nsp4446A446VgCtgTt171171B.1.20.001506
ORF1ab/nsp4446A446VgCtgTt149149B.1.1770.001962
ORF1ab/nsp4446A446VgCtgTt138138AY.1170.011663
ORF1ab/nsp4446A446VgCtgTt128128B.1.1600.003992
ORF1ab/nsp4446A446VgCtgTt126126AY.1100.014199
ORF1ab/nsp4446A446VgCtgTt122122AZ.2.10.99187
ORF1ab/nsp4446A446VgCtgTt119119AZ.61
ORF1ab/nsp4446A446VgCtgTt113113AY.980.008926
ORF1ab/nsp4446A446VgCtgTt111111B0.014187
ORF1ab/nsp4446A446VgCtgTt108108AY.1130.015378
ORF1ab/nsp4446A446VgCtgTt103103P.1.140.004924
ORF1ab/nsp4446A446VgCtgTt102102B.1.5960.008888
ORF1ab/nsp4446A446VgCtgTt9797AY.180.979798
ORF1ab/nsp4446A446VgCtgTt9696AY.450.011682
ORF1ab/nsp4446A446VgCtgTt9292AY.170.754098
ORF1ab/nsp4446A446VgCtgTt7878AY.1050.050161
ORF1ab/nsp4446A446VgCtgTt7676AY.1000.003497
ORF1ab/nsp4446A446VgCtgTt6464AY.98.10.0031
ORF1ab/nsp4446A446VgCtgTt6161B.1.4290.001435
ORF1ab/nsp4446A446VgCtgTt5959P.50.808219
ORF1ab/nsp4446A446VgCtgTt5858B.1.2650.073698
ORF1ab/nsp4446A446VgCtgTt5555AY.210.104364
ORF1ab/nsp4446A446VgCtgTt5555AY.30.000547
ORF1ab/nsp4446A446VgCtgTt5555B.1.2580.00366
ORF1ab/nsp4446A446VgCtgTt5353AY.310.981481
ORF1ab/nsp4446A446VgCtgTt5151AY.1180.003195
ORF1ab/nsp4446A446VgCtgTt5151B.1.4700.071629
ORF1ab/nsp4446A446VgCtgTt4747AY.1200.001747
ORF1ab/nsp4446A446VgCtgTt4747AY.120.20.060411
ORF1ab/nsp4446A446VgCtgTt4646AY.460.004788
ORF1ab/nsp4446A446VgCtgTt4444AY.320.023429
ORF1ab/nsp4446A446VgCtgTt4343AY.1210.005819
ORF1ab/nsp4446A446VgCtgTt4242AY.930.011469
ORF1ab/nsp4446A446VgCtgTt4242B.1.258.170.004367
ORF1ab/nsp4446A446VgCtgTt4141AY.230.00286
ORF1ab/nsp4446A446VgCtgTt4141AY.910.029949
ORF1ab/nsp4446A446VgCtgTt4040AY.330.002671
ORF1ab/nsp4446A446VgCtgTt3939AY.39.10.001545
ORF1ab/nsp4446A446VgCtgTt3939AY.860.032365
ORF1ab/nsp4446A446VgCtgTt3939B.1.1.2840.004189
ORF1ab/nsp4446A446VgCtgTt3939B.1.1820.282609
ORF1ab/nsp4446A446VgCtgTt3838AY.4.2.10.005662
ORF1ab/nsp4446A446VgCtgTt3737AY.770.041714
ORF1ab/nsp4446A446VgCtgTt3737B.1.5260.00087
ORF1ab/nsp4446A446VgCtgTt3636B.1.2140.131868
ORF1ab/nsp4446A446VgCtgTt3636C.401
ORF1ab/nsp4446A446VgCtgTt3535AY.1020.000928
ORF1ab/nsp4446A446VgCtgTt3333AY.46.20.020966
ORF1ab/nsp4446A446VgCtgTt3333B.1.3460.04325
ORF1ab/nsp4446A446VgCtgTt3232B.1.160.200.285714
ORF1ab/nsp4446A446VgCtgTt3030B.1.2210.002131
ORF1ab/nsp4446A446VgCtgTt2828AY.5.30.009447
ORF1ab/nsp4446A446VgCtgTt2828B.1.1.630.010802
ORF1ab/nsp4446A446VgCtgTt2828B.1.360.004085
ORF1ab/nsp4446A446VgCtgTt2626AY.420.001046
ORF1ab/nsp4446A446VgCtgTt2626AY.5.40.007194
ORF1ab/nsp4446A446VgCtgTt2626AY.780.040062
ORF1ab/nsp4446A446VgCtgTt2525AY.1190.000883
ORF1ab/nsp4446A446VgCtgTt2424AY.350.005593
ORF1ab/nsp4446A446VgCtgTt2424B.1.177.70.003956
ORF1ab/nsp4446A446VgCtgTt2424P.20.004479
ORF1ab/nsp4446A446VgCtgTt2323B.1.1.4190.17037
ORF1ab/nsp4446A446VgCtgTt2323C.350.017802
ORF1ab/nsp4446A446VgCtgTt2222AY.410.006467
ORF1ab/nsp4446A446VgCtgTt2121AY.4.20.000455
ORF1ab/nsp4446A446VgCtgTt2121AY.50.000434
ORF1ab/nsp4446A446VgCtgTt2121AY.850.008971
ORF1ab/nsp4446A446VgCtgTt2121B.1.1.3060.009206
ORF1ab/nsp4446A446VgCtgTt2020AY.1060.006698
ORF1ab/nsp4446A446VgCtgTt2020AY.1140.004622
ORF1ab/nsp4446A446VgCtgTt2020B.1.3950.140845
ORF1ab/nsp4446A446VgCtgTt2020B.1.5250.002263
ORF1ab/nsp4446A446VgCtgTt1919AY.10.007519
ORF1ab/nsp4446A446VgCtgTt1919B.1.1.580.102151
ORF1ab/nsp4446A446VgCtgTt1818B.1.177.730.010193
ORF1ab/nsp4446A446VgCtgTt1717AY.880.015031
ORF1ab/nsp4446A446VgCtgTt1616AY.1080.017641
ORF1ab/nsp4446A446VgCtgTt1616B.1.2920.941176
ORF1ab/nsp4446A446VgCtgTt1515A0.005805
ORF1ab/nsp4446A446VgCtgTt1515AY.920.004309
ORF1ab/nsp4446A446VgCtgTt1515B.1.1.3170.006175
ORF1ab/nsp4446A446VgCtgTt1515B.1.617.10.001934
ORF1ab/nsp4446A446VgCtgTt1414B.1.1.3160.012951
ORF1ab/nsp4446A446VgCtgTt1414B.1.1.3810.56
ORF1ab/nsp4446A446VgCtgTt1314B.1.1.5190.000516
ORF1ab/nsp4446A446VgCtgTt1414B.1.177.860.002568
ORF1ab/nsp4446A446VgCtgTt1414P.1.150.003253
ORF1ab/nsp4446A446VgCtgTt1313AY.1160.003728
ORF1ab/nsp4446A446VgCtgTt1313AY.46.60.000939
ORF1ab/nsp4446A446VgCtgTt1313AY.870.010824
ORF1ab/nsp4446A446VgCtgTt1313B.1.6280.004581
ORF1ab/nsp4446A446VgCtgTt1113P.1.160.004115
ORF1ab/nsp4446A446VgCtgTt1212AY.360.001779
ORF1ab/nsp4446A446VgCtgTt1212AY.7.10.001352
ORF1ab/nsp4446A446VgCtgTt1212AY.810.023904
ORF1ab/nsp4446A446VgCtgTt1212B.1.1.2690.016238
ORF1ab/nsp4446A446VgCtgTt1212B.1.1.330.005051
ORF1ab/nsp4446A446VgCtgTt1212B.1.4090.009375
ORF1ab/nsp4446A446VgCtgTt1111AY.29.10.002426
ORF1ab/nsp4446A446VgCtgTt1111AY.900.007529
ORF1ab/nsp4446A446VgCtgTt1111B.1.36.180.004622
ORF1ab/nsp4446A446VgCtgTt1010AY.340.00097
ORF1ab/nsp4446A446VgCtgTt1010AY.46.10.010267
ORF1ab/nsp4446A446VgCtgTt1010B.1.1.390.005097
ORF1ab/nsp4446A446VgCtgTt1010B.1.1.4330.014245
ORF1ab/nsp4446A446VgCtgTt1010B.1.1110.011751
ORF1ab/nsp4446A446VgCtgTt1010P.1.120.00484
ORF1ab/nsp4446A446VgCtgTt89B.1.5760.007253
ORF1ab/nsp4446A446VgCtgTt99B.1.6320.060403
ORF1ab/nsp4446A446VgCtgTt88AY.120.002528
ORF1ab/nsp4446A446VgCtgTt88AY.120.10.002568
ORF1ab/nsp4446A446VgCtgTt88AY.950.006088
ORF1ab/nsp4446A446VgCtgTt88B.1.1.3560.068376
ORF1ab/nsp4446A446VgCtgTt88B.1.177.480.025
ORF1ab/nsp4446A446VgCtgTt88Q.10.001011
ORF1ab/nsp4446A446VgCtgTt77AT.10.035897
ORF1ab/nsp4446A446VgCtgTt77AY.7.20.003915
ORF1ab/nsp4446A446VgCtgTt77AY.840.003062
ORF1ab/nsp4446A446VgCtgTt77B.1.214.20.004197
ORF1ab/nsp4446A446VgCtgTt77B.1.36.290.003621
ORF1ab/nsp4446A446VgCtgTt77B.1.5090.006061
ORF1ab/nsp4446A446VgCtgTt77B.1.6360.04698
ORF1ab/nsp4446A446VgCtgTt77Q.80.001154
ORF1ab/nsp4446A446VgCtgTt66AY.1090.004438
ORF1ab/nsp4446A446VgCtgTt66B.1.1.100.006689
ORF1ab/nsp4446A446VgCtgTt66B.1.1.280.001867
ORF1ab/nsp4446A446VgCtgTt66B.1.2430.000418
ORF1ab/nsp4446A446VgCtgTt66B.1.90.037037
ORF1ab/nsp4446A446VgCtgTt66D.20.00045
ORF1ab/nsp4446A446VgCtgTt55B.1.1.2580.016287
ORF1ab/nsp4446A446VgCtgTt55B.1.1.4640.007364
ORF1ab/nsp4446A446VgCtgTt55B.1.2410.004058
ORF1ab/nsp4446A446VgCtgTt55B.1.3110.001373
ORF1ab/nsp4446A446VgCtgTt55B.1.438.10.000536
ORF1ab/nsp4446A446VgCtgTt55B.1.6210.000443
ORF1ab/nsp4446A446VgCtgTt55C.370.00058
ORF1ab/nsp4446A446VgCtgTt55P.1.170.000809
ORF1ab/nsp4446A446VgCtgTt35Q.30.000435
ORF1ab/nsp4446A446VgCtgTt44AY.1040.007937
ORF1ab/nsp4446A446VgCtgTt44AY.220.008368
ORF1ab/nsp4446A446VgCtgTt44AY.99.10.006211
ORF1ab/nsp4446A446VgCtgTt44B.1.1.1170.038835
ORF1ab/nsp4446A446VgCtgTt44B.1.1.1290.036697
ORF1ab/nsp4446A446VgCtgTt44B.1.1.1690.072727
ORF1ab/nsp4446A446VgCtgTt44B.1.1.2220.000816
ORF1ab/nsp4446A446VgCtgTt44B.1.1.3720.002755
ORF1ab/nsp4446A446VgCtgTt44B.1.1.4480.00813
ORF1ab/nsp4446A446VgCtgTt44B.1.1.5070.034783
ORF1ab/nsp4446A446VgCtgTt44B.1.1.700.001364
ORF1ab/nsp4446A446VgCtgTt44B.1.177.810.000757
ORF1ab/nsp4446A446VgCtgTt44B.1.3670.00317
ORF1ab/nsp4446A446VgCtgTt44B.1.3690.001141
ORF1ab/nsp4446A446VgCtgTt44B.1.5950.001044
ORF1ab/nsp4446A446VgCtgTt44B.1.6180.016129
ORF1ab/nsp4446A446VgCtgTt34B.1.6230.001609
ORF1ab/nsp4446A446VgCtgTt44C.300.006908
ORF1ab/nsp4446A446VgCtgTt34P.1.10.000953
ORF1ab/nsp4446A446VgCtgTt44P.1.130.003594
ORF1ab/nsp4446A446VgCtgTt33AY.1010.001471
ORF1ab/nsp4446A446VgCtgTt33AY.4.40.001227
ORF1ab/nsp4446A446VgCtgTt33AY.46.40.000494
ORF1ab/nsp4446A446VgCtgTt33AY.46.50.000595
ORF1ab/nsp4446A446VgCtgTt33AY.60.000123
ORF1ab/nsp4446A446VgCtgTt33AY.70.000588
ORF1ab/nsp4446A446VgCtgTt33B.1.1.1420.052632
ORF1ab/nsp4446A446VgCtgTt13B.1.1.2200.001859
ORF1ab/nsp4446A446VgCtgTt33B.1.1.250.001706
ORF1ab/nsp4446A446VgCtgTt33B.1.1.2940.003797
ORF1ab/nsp4446A446VgCtgTt33B.1.1.3440.032258
ORF1ab/nsp4446A446VgCtgTt33B.1.1.4090.008499
ORF1ab/nsp4446A446VgCtgTt33B.1.1.4120.022901
ORF1ab/nsp4446A446VgCtgTt33B.1.1.890.018182
ORF1ab/nsp4446A446VgCtgTt33B.1.1260.003827
ORF1ab/nsp4446A446VgCtgTt33B.1.1390.002199
ORF1ab/nsp4446A446VgCtgTt33B.1.1570.008955
ORF1ab/nsp4446A446VgCtgTt33B.1.177.720.010169
ORF1ab/nsp4446A446VgCtgTt33B.1.2340.000396
ORF1ab/nsp4446A446VgCtgTt33B.1.3360.007317
ORF1ab/nsp4446A446VgCtgTt33B.1.3750.002459
ORF1ab/nsp4446A446VgCtgTt23B.1.4270.000101
ORF1ab/nsp4446A446VgCtgTt33B.1.466.20.001174
ORF1ab/nsp4446A446VgCtgTt33B.1.6090.001438
ORF1ab/nsp4446A446VgCtgTt33P.1.60.005837
ORF1ab/nsp4446A446VgCtgTt22A.270.003311
ORF1ab/nsp4446A446VgCtgTt22AY.1070.000932
ORF1ab/nsp4446A446VgCtgTt22AY.1110.000366
ORF1ab/nsp4446A446VgCtgTt22AY.3.10.000171
ORF1ab/nsp4446A446VgCtgTt22AY.800.002257
ORF1ab/nsp4446A446VgCtgTt22AY.820.002714
ORF1ab/nsp4446A446VgCtgTt22AY.830.003448
ORF1ab/nsp4446A446VgCtgTt22AY.940.000885
ORF1ab/nsp4446A446VgCtgTt22AY.99.20.000184
ORF1ab/nsp4446A446VgCtgTt22B.1.1.10.000653
ORF1ab/nsp4446A446VgCtgTt22B.1.1.1210.004854
ORF1ab/nsp4446A446VgCtgTt22B.1.1.1940.009901
ORF1ab/nsp4446A446VgCtgTt22B.1.1.2140.000111
ORF1ab/nsp4446A446VgCtgTt22B.1.1.4130.013793
ORF1ab/nsp4446A446VgCtgTt22B.1.1.500.001358
ORF1ab/nsp4446A446VgCtgTt22B.1.1.540.006042
ORF1ab/nsp4446A446VgCtgTt22B.1.1680.054054
ORF1ab/nsp4446A446VgCtgTt22B.1.177.210.000153
ORF1ab/nsp4446A446VgCtgTt22B.1.177.40.000422
ORF1ab/nsp4446A446VgCtgTt22B.1.177.440.001038
ORF1ab/nsp4446A446VgCtgTt22B.1.177.600.000437
ORF1ab/nsp4446A446VgCtgTt22B.1.1890.008584
ORF1ab/nsp4446A446VgCtgTt22B.1.1990.008264
ORF1ab/nsp4446A446VgCtgTt22B.1.2320.001075
ORF1ab/nsp4446A446VgCtgTt22B.1.243.10.044444
ORF1ab/nsp4446A446VgCtgTt22B.1.3200.002491
ORF1ab/nsp4446A446VgCtgTt22B.1.350.016949
ORF1ab/nsp4446A446VgCtgTt22B.1.351.20.000605
ORF1ab/nsp4446A446VgCtgTt22B.1.3560.003454
ORF1ab/nsp4446A446VgCtgTt22B.1.4040.002604
ORF1ab/nsp4446A446VgCtgTt22B.1.4130.008511
ORF1ab/nsp4446A446VgCtgTt22B.1.4590.008163
ORF1ab/nsp4446A446VgCtgTt22B.1.4990.002101
ORF1ab/nsp4446A446VgCtgTt12B.1.5240.001406
ORF1ab/nsp4446A446VgCtgTt22B.1.5610.000794
ORF1ab/nsp4446A446VgCtgTt22B.1.5800.00813
ORF1ab/nsp4446A446VgCtgTt22B.1.6020.013072
ORF1ab/nsp4446A446VgCtgTt22B.1.6040.034483
ORF1ab/nsp4446A446VgCtgTt22B.1.617.30.00597
ORF1ab/nsp4446A446VgCtgTt22B.550.0059
ORF1ab/nsp4446A446VgCtgTt22B.60.00182
ORF1ab/nsp4446A446VgCtgTt22B.6.60.001778
ORF1ab/nsp4446A446VgCtgTt22C.10.004785
ORF1ab/nsp4446A446VgCtgTt22C.160.002121
ORF1ab/nsp4446A446VgCtgTt22C.2.10.013333
ORF1ab/nsp4446A446VgCtgTt22C.36.30.001134
ORF1ab/nsp4446A446VgCtgTt22P.1.100.000539
ORF1ab/nsp4446A446VgCtgTt22P.1.70.000639
ORF1ab/nsp4446A446VgCtgTt12Q.40.000455
ORF1ab/nsp4446A446VgCtgTt110.055556
ORF1ab/nsp4446A446VgCtgTt11A.20.000662
ORF1ab/nsp4446A446VgCtgTt11A.2.20.001689
ORF1ab/nsp4446A446VgCtgTt11AU.30.00211
ORF1ab/nsp4446A446VgCtgTt11AY.116.10.000311
ORF1ab/nsp4446A446VgCtgTt11AY.23.10.000417
ORF1ab/nsp4446A446VgCtgTt11AY.34.10.00051
ORF1ab/nsp4446A446VgCtgTt11AY.760.004831
ORF1ab/nsp4446A446VgCtgTt11AY.790.001211
ORF1ab/nsp4446A446VgCtgTt11AY.970.001701
ORF1ab/nsp4446A446VgCtgTt11AY.990.001049
ORF1ab/nsp4446A446VgCtgTt11B.1.1.1410.002012
ORF1ab/nsp4446A446VgCtgTt11B.1.1.1700.001247
ORF1ab/nsp4446A446VgCtgTt11B.1.1.2370.005405
ORF1ab/nsp4446A446VgCtgTt11B.1.1.2440.015385
ORF1ab/nsp4446A446VgCtgTt11B.1.1.3110.000358
ORF1ab/nsp4446A446VgCtgTt11B.1.1.3220.008772
ORF1ab/nsp4446A446VgCtgTt11B.1.1.3260.001761
ORF1ab/nsp4446A446VgCtgTt11B.1.1.3330.001076
ORF1ab/nsp4446A446VgCtgTt11B.1.1.3480.000796
ORF1ab/nsp4446A446VgCtgTt11B.1.1.3690.000446
ORF1ab/nsp4446A446VgCtgTt11B.1.1.3800.009804
ORF1ab/nsp4446A446VgCtgTt11B.1.1.3960.045455
ORF1ab/nsp4446A446VgCtgTt11B.1.1.3970.002252
ORF1ab/nsp4446A446VgCtgTt11B.1.1.3980.003226
ORF1ab/nsp4446A446VgCtgTt11B.1.1.4290.004608
ORF1ab/nsp4446A446VgCtgTt11B.1.1.4320.001266
ORF1ab/nsp4446A446VgCtgTt11B.1.1.5170.006803
ORF1ab/nsp4446A446VgCtgTt11B.1.1.5180.006329
ORF1ab/nsp4446A446VgCtgTt11B.1.1.5230.001563
ORF1ab/nsp4446A446VgCtgTt11B.1.1.5250.005464
ORF1ab/nsp4446A446VgCtgTt11B.1.1.5260.003546
ORF1ab/nsp4446A446VgCtgTt11B.1.1.5280.004808
ORF1ab/nsp4446A446VgCtgTt11B.1.1.570.011494
ORF1ab/nsp4446A446VgCtgTt11B.1.1.610.008772
ORF1ab/nsp4446A446VgCtgTt11B.1.1100.004525
ORF1ab/nsp4446A446VgCtgTt11B.1.1150.021739
ORF1ab/nsp4446A446VgCtgTt11B.1.160.280.002924
ORF1ab/nsp4446A446VgCtgTt11B.1.1700.00431
ORF1ab/nsp4446A446VgCtgTt11B.1.177.150.000631
ORF1ab/nsp4446A446VgCtgTt11B.1.177.310.011494
ORF1ab/nsp4446A446VgCtgTt11B.1.177.330.001645
ORF1ab/nsp4446A446VgCtgTt11B.1.177.570.000281
ORF1ab/nsp4446A446VgCtgTt11B.1.177.60.000977
ORF1ab/nsp4446A446VgCtgTt11B.1.177.620.001192
ORF1ab/nsp4446A446VgCtgTt11B.1.177.770.000726
ORF1ab/nsp4446A446VgCtgTt11B.1.177.90.001332
ORF1ab/nsp4446A446VgCtgTt11B.1.220.001318
ORF1ab/nsp4446A446VgCtgTt11B.1.2220.001692
ORF1ab/nsp4446A446VgCtgTt11B.1.258.120.007874
ORF1ab/nsp4446A446VgCtgTt11B.1.258.210.007752
ORF1ab/nsp4446A446VgCtgTt11B.1.2700.005618
ORF1ab/nsp4446A446VgCtgTt11B.1.2800.007143
ORF1ab/nsp4446A446VgCtgTt11B.1.2840.013158
ORF1ab/nsp4446A446VgCtgTt11B.1.2890.00266
ORF1ab/nsp4446A446VgCtgTt11B.1.3240.001605
ORF1ab/nsp4446A446VgCtgTt11B.1.3290.000608
ORF1ab/nsp4446A446VgCtgTt11B.1.3380.008621
ORF1ab/nsp4446A446VgCtgTt11B.1.3490.000715
ORF1ab/nsp4446A446VgCtgTt11B.1.3500.002933
ORF1ab/nsp4446A446VgCtgTt11B.1.36.160.001425
ORF1ab/nsp4446A446VgCtgTt11B.1.36.220.001208
ORF1ab/nsp4446A446VgCtgTt11B.1.36.390.002217
ORF1ab/nsp4446A446VgCtgTt11B.1.3610.001289
ORF1ab/nsp4446A446VgCtgTt11B.1.3780.006849
ORF1ab/nsp4446A446VgCtgTt11B.1.3910.001127
ORF1ab/nsp4446A446VgCtgTt11B.1.3990.001934
ORF1ab/nsp4446A446VgCtgTt11B.1.4000.000429
ORF1ab/nsp4446A446VgCtgTt11B.1.4160.001269
ORF1ab/nsp4446A446VgCtgTt11B.1.4330.003195
ORF1ab/nsp4446A446VgCtgTt11B.1.4620.007246
ORF1ab/nsp4446A446VgCtgTt11B.1.4680.005714
ORF1ab/nsp4446A446VgCtgTt11B.1.4740.001901
ORF1ab/nsp4446A446VgCtgTt11B.1.4980.020408
ORF1ab/nsp4446A446VgCtgTt11B.1.5300.007143
ORF1ab/nsp4446A446VgCtgTt11B.1.5330.009615
ORF1ab/nsp4446A446VgCtgTt11B.1.5380.008065
ORF1ab/nsp4446A446VgCtgTt11B.1.5480.035714
ORF1ab/nsp4446A446VgCtgTt11B.1.5540.004405
ORF1ab/nsp4446A446VgCtgTt11B.1.5600.00463
ORF1ab/nsp4446A446VgCtgTt11B.1.5680.001111
ORF1ab/nsp4446A446VgCtgTt11B.1.5750.000303
ORF1ab/nsp4446A446VgCtgTt11B.1.6250.002353
ORF1ab/nsp4446A446VgCtgTt11B.1.6270.00202
ORF1ab/nsp4446A446VgCtgTt11B.1.6290.013333
ORF1ab/nsp4446A446VgCtgTt11B.1.6380.052632
ORF1ab/nsp4446A446VgCtgTt11B.1.9.50.005682
ORF1ab/nsp4446A446VgCtgTt11B.200.023256
ORF1ab/nsp4446A446VgCtgTt11B.30.000831
ORF1ab/nsp4446A446VgCtgTt11B.400.000364
ORF1ab/nsp4446A446VgCtgTt11C.36.3.10.002717
ORF1ab/nsp4446A446VgCtgTt11C.37.10.002618
ORF1ab/nsp4446A446VgCtgTt11C.60.037037
ORF1ab/nsp4446A446VgCtgTt11N.50.001767
ORF1ab/nsp4446A446VgCtgTt11P.30.001595
ORF1ab/nsp4446A446VgCtgTt11R.10.00009
ORF1ab/nsp4446A446VgCtgTt11Z.10.00289

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.