CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 438 & Codon = ctC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4438L438LL3201LsynctTctC3162950.9335449866-9868

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4438L438LctTctC295316All0.000056
ORF1ab/nsp4438L438LctTctC233233AY.1030.001447
ORF1ab/nsp4438L438LctTctC1013B.1.1.70.000009
ORF1ab/nsp4438L438LctTctC1212AY.40.000019
ORF1ab/nsp4438L438LctTctC45B.1.10.000073
ORF1ab/nsp4438L438LctTctC55B.1.617.20.000019
ORF1ab/nsp4438L438LctTctC44AY.1020.000106
ORF1ab/nsp4438L438LctTctC33AY.50.000062
ORF1ab/nsp4438L438LctTctC23B.10.000018
ORF1ab/nsp4438L438LctTctC33B.1.20.000026
ORF1ab/nsp4438L438LctTctC22B.1.1770.000026
ORF1ab/nsp4438L438LctTctC22C.170.111111
ORF1ab/nsp4438L438LctTctC22C.360.001821
ORF1ab/nsp4438L438LctTctC11AY.1160.000287
ORF1ab/nsp4438L438LctTctC11AY.160.00038
ORF1ab/nsp4438L438LctTctC11AY.430.000004
ORF1ab/nsp4438L438LctTctC11AY.550.000917
ORF1ab/nsp4438L438LctTctC11AY.980.000079
ORF1ab/nsp4438L438LctTctC11AY.98.10.000048
ORF1ab/nsp4438L438LctTctC11B.1.1.2790.001121
ORF1ab/nsp4438L438LctTctC11B.1.1.3180.000302
ORF1ab/nsp4438L438LctTctC11B.1.1600.000031
ORF1ab/nsp4438L438LctTctC11B.1.177.860.000183
ORF1ab/nsp4438L438LctTctC11B.1.3690.000285
ORF1ab/nsp4438L438LctTctC11D.20.000075
ORF1ab/nsp4438L438LctTctC11N.50.001767