CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 435 & Codon = ctT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4435L435LL3198LsynctActT21030490.002339857-9859

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4435L435LctActT4921030All0.000009
ORF1ab/nsp4435L435LctActT22783B.1.1.70.000002
ORF1ab/nsp4435L435LctActT11245AY.40.000002
ORF1ab/nsp4435L435LctActT11229B.10.000101
ORF1ab/nsp4435L435LctActT4172B.1.20.000035
ORF1ab/nsp4435L435LctActT1171AY.430.000004
ORF1ab/nsp4435L435LctActT1163AY.440.000006
ORF1ab/nsp4435L435LctActT2162P.10.000032
ORF1ab/nsp4435L435LctActT1145B.1.2580.000067
ORF1ab/nsp4435L435LctActT696B.1.1600.000187
ORF1ab/nsp4435L435LctActT188B.1.10.000018
ORF1ab/nsp4435L435LctActT370B.1.1770.00004
ORF1ab/nsp4435L435LctActT139B.1.3510.00003
ORF1ab/nsp4435L435LctActT130AY.5.40.000277
ORF1ab/nsp4435L435LctActT111AY.450.000122
ORF1ab/nsp4435L435LctActT110P.1.120.000484
ORF1ab/nsp4435L435LctActT28B0.000256
ORF1ab/nsp4435L435LctActT15AY.980.000079
ORF1ab/nsp4435L435LctActT24B.1.177.810.000379
ORF1ab/nsp4435L435LctActT13B.1.1.4090.002833
ORF1ab/nsp4435L435LctActT12B.1.258.110.000396
ORF1ab/nsp4435L435LctActT22B.1.4730.038462
ORF1ab/nsp4435L435LctActT11B.1.1.1610.003534
ORF1ab/nsp4435L435LctActT11B.1.1.470.005348
ORF1ab/nsp4435L435LctActT11B.1.5900.004545