CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 435 & Codon = cCa

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4435L435PL3198PnonsyncTacCa363619857-9859

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4435L435PcTacCa3636All0.000007
ORF1ab/nsp4435L435PcTacCa66AY.250.000036
ORF1ab/nsp4435L435PcTacCa66AY.40.000009
ORF1ab/nsp4435L435PcTacCa44AY.390.000099
ORF1ab/nsp4435L435PcTacCa22AY.200.000078
ORF1ab/nsp4435L435PcTacCa22B.10.000018
ORF1ab/nsp4435L435PcTacCa22B.1.1.70.000002
ORF1ab/nsp4435L435PcTacCa22B.1.617.20.000008
ORF1ab/nsp4435L435PcTacCa11AY.10.000396
ORF1ab/nsp4435L435PcTacCa11AY.1020.000027
ORF1ab/nsp4435L435PcTacCa11AY.1030.000006
ORF1ab/nsp4435L435PcTacCa11AY.1070.000466
ORF1ab/nsp4435L435PcTacCa11AY.1190.000035
ORF1ab/nsp4435L435PcTacCa11AY.230.00007
ORF1ab/nsp4435L435PcTacCa11AY.30.00001
ORF1ab/nsp4435L435PcTacCa11AY.39.10.00004
ORF1ab/nsp4435L435PcTacCa11AY.440.000006
ORF1ab/nsp4435L435PcTacCa11B.1.10.000018
ORF1ab/nsp4435L435PcTacCa11B.1.1770.000013
ORF1ab/nsp4435L435PcTacCa11B.1.617.10.000129