CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 43

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp443I43II2806IsynatCatT963695780.9939818681-8683
ORF1ab/nsp443I43II2806IsynatCatA9636580.006019098681-8683
ORF1ab/nsp443I43VI2806VnonsynAtcGtc4394370.9954448681-8683
ORF1ab/nsp443I43VI2806VnonsynAtCGtT43920.004555818681-8683
ORF1ab/nsp443I43TI2806TnonsynaTcaCc3233220.9969048681-8683
ORF1ab/nsp443I43TI2806TnonsynaTCaCG32310.003095988681-8683
ORF1ab/nsp443I43delI2806deldelATC---10310318681-8683
ORF1ab/nsp443I43FI2806FnonsynAtcTtc26230.8846158681-8683
ORF1ab/nsp443I43FI2806FnonsynAtCTtT2630.1153858681-8683
ORF1ab/nsp443I43LI2806LnonsynAtcCtc232318681-8683
ORF1ab/nsp443I43NI2806NnonsynaTcaAc18140.7777788681-8683
ORF1ab/nsp443I43NI2806NnonsynaTCaAT1840.2222228681-8683
ORF1ab/nsp443I43SI2806SnonsynaTcaGc11100.9090918681-8683
ORF1ab/nsp443I43SI2806SnonsynaTCaGT1110.09090918681-8683
ORF1ab/nsp443I43MI2806MnonsynatCatG6618681-8683
ORF1ab/nsp443I43YI2806YnonsynATcTAc630.58681-8683
ORF1ab/nsp443I43YI2806YnonsynATCTAT630.58681-8683
ORF1ab/nsp443I43del2I2806del2delATc--c2218681-8683
ORF1ab/nsp443I43del1I2806del1delAtc-tc210.58681-8683
ORF1ab/nsp443I43del1I2806del1delatCat-210.58681-8683
ORF1ab/nsp443I43EI2806EnonsynATCGAA1118681-8683
ORF1ab/nsp443I43KI2806KnonsynaTCaAA1118681-8683

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp443I43IatCatT95789636All0.001832
ORF1ab/nsp443I43IatCatA589636All0.000011
ORF1ab/nsp443I43IatCatT40074007B.1.1.370.772806
ORF1ab/nsp443I43IatCatT948952B.1.1.70.000849
ORF1ab/nsp443I43IatCatA4952B.1.1.70.000004
ORF1ab/nsp443I43IatCatT768768AY.40.001195
ORF1ab/nsp443I43VAtcGtc437439All0.000084
ORF1ab/nsp443I43VAtCGtT2439All0
ORF1ab/nsp443I43IatCatT386386B.1.5950.100731
ORF1ab/nsp443I43IatCatT350350AY.430.001551
ORF1ab/nsp443I43IatCatT346347B.1.617.20.001303
ORF1ab/nsp443I43IatCatA1347B.1.617.20.000004
ORF1ab/nsp443I43IatCatT342342B.1.36.290.176927
ORF1ab/nsp443I43TaTcaCc322323All0.000062
ORF1ab/nsp443I43TaTCaCG1323All0
ORF1ab/nsp443I43IatCatT156160B.10.001429
ORF1ab/nsp443I43IatCatA4160B.10.000037
ORF1ab/nsp443I43VAtcGtc117117AY.40.000182
ORF1ab/nsp443I43IatCatT79113AY.250.000475
ORF1ab/nsp443I43IatCatA34113AY.250.000205
ORF1ab/nsp443I43IatCatT111112AY.440.000676
ORF1ab/nsp443I43IatCatA1112AY.440.000006
ORF1ab/nsp443I43delATC---103103All0.00002
ORF1ab/nsp443I43IatCatT101101B.1.1.2220.020604
ORF1ab/nsp443I43TaTcaCc101101B.1.1.70.00009
ORF1ab/nsp443I43IatCatT101101B.1.20.000889
ORF1ab/nsp443I43IatCatT9494AY.320.050053
ORF1ab/nsp443I43IatCatT8989B.1.2210.006322
ORF1ab/nsp443I43IatCatT7777B.1.4290.001812
ORF1ab/nsp443I43IatCatT6969AY.1000.003174
ORF1ab/nsp443I43IatCatT6767B.1.2381
ORF1ab/nsp443I43IatCatT6565B.1.5250.007355
ORF1ab/nsp443I43IatCatT6363B.1.2430.004384
ORF1ab/nsp443I43IatCatT6263P.10.000977
ORF1ab/nsp443I43IatCatA163P.10.000016
ORF1ab/nsp443I43IatCatT6060B.1.1.1490.983607
ORF1ab/nsp443I43VAtcGtc5959B.1.1.70.000053
ORF1ab/nsp443I43IatCatT5758AY.1030.000354
ORF1ab/nsp443I43IatCatA158AY.1030.000006
ORF1ab/nsp443I43VAtcGtc4949B.1.5960.00427
ORF1ab/nsp443I43VAtcGtc4848AY.470.001493
ORF1ab/nsp443I43IatCatT4747AY.4.20.001019
ORF1ab/nsp443I43VAtcGtc4646AY.430.000204
ORF1ab/nsp443I43IatCatT4646B.1.3690.01312
ORF1ab/nsp443I43IatCatT4444B.1.1770.000579
ORF1ab/nsp443I43delATC---4040B.1.1.70.000036
ORF1ab/nsp443I43IatCatT3737B.1.10.000671
ORF1ab/nsp443I43IatCatT3636P.70.157205
ORF1ab/nsp443I43IatCatT2727AY.290.000426
ORF1ab/nsp443I43IatCatT2727AY.30.000269
ORF1ab/nsp443I43IatCatT2727AY.390.000667
ORF1ab/nsp443I43IatCatT2727B.1.5770.018557
ORF1ab/nsp443I43FAtcTtc2326All0.000004
ORF1ab/nsp443I43FAtCTtT326All0.000001
ORF1ab/nsp443I43TaTcaCc2424AY.440.000146
ORF1ab/nsp443I43LAtcCtc2323All0.000004
ORF1ab/nsp443I43IatCatT2323B.1.3510.000684
ORF1ab/nsp443I43TaTcaCc2121AY.30.000209
ORF1ab/nsp443I43TaTcaCc2121AY.40.000033
ORF1ab/nsp443I43IatCatT2121AY.60.000864
ORF1ab/nsp443I43IatCatT2121B.1.4270.00106
ORF1ab/nsp443I43IatCatT2020AY.410.005879
ORF1ab/nsp443I43TaTcaCc2020B.1.617.20.000075
ORF1ab/nsp443I43NaTcaAc1418All0.000003
ORF1ab/nsp443I43NaTCaAT418All0.000001
ORF1ab/nsp443I43IatCatT1618AY.1130.002278
ORF1ab/nsp443I43IatCatA218AY.1130.000285
ORF1ab/nsp443I43IatCatT1818B.1.5260.000423
ORF1ab/nsp443I43IatCatT1717AY.1200.000632
ORF1ab/nsp443I43IatCatT1717AY.610.001781
ORF1ab/nsp443I43IatCatT1717B.1.177.600.003713
ORF1ab/nsp443I43VAtcGtc1616AY.250.000096
ORF1ab/nsp443I43TaTcaCc1515AY.250.00009
ORF1ab/nsp443I43IatCatT1515B.1.177.170.012315
ORF1ab/nsp443I43IatCatT1414AY.1180.000877
ORF1ab/nsp443I43IatCatT1414B.1.1.460.061135
ORF1ab/nsp443I43IatCatT1313P.1.20.015029
ORF1ab/nsp443I43IatCatT1212AY.230.000837
ORF1ab/nsp443I43IatCatT1212AY.980.000948
ORF1ab/nsp443I43FAtcTtc1112B.1.1.70.00001
ORF1ab/nsp443I43FAtCTtT112B.1.1.70.000001
ORF1ab/nsp443I43VAtcGtc1212B.1.617.20.000045
ORF1ab/nsp443I43SaTcaGc1011All0.000002
ORF1ab/nsp443I43SaTCaGT111All0
ORF1ab/nsp443I43IatCatT1111AY.1020.000292
ORF1ab/nsp443I43IatCatT1111AY.98.10.000533
ORF1ab/nsp443I43IatCatT1111B.1.1.500.007468
ORF1ab/nsp443I43IatCatT1010AY.200.000389
ORF1ab/nsp443I43IatCatT910AY.330.000601
ORF1ab/nsp443I43IatCatA110AY.330.000067
ORF1ab/nsp443I43VAtcGtc1010AY.390.000247
ORF1ab/nsp443I43TaTcaCc910AY.430.00004
ORF1ab/nsp443I43TaTCaCG110AY.430.000004
ORF1ab/nsp443I43IatCatT1010AY.450.001217
ORF1ab/nsp443I43TaTcaCc1010AY.90.000676
ORF1ab/nsp443I43IatCatT1010B.1.1.2140.000555
ORF1ab/nsp443I43IatCatT1010B.1.1600.000312
ORF1ab/nsp443I43IatCatT1010B.1.360.001459
ORF1ab/nsp443I43IatCatT1010L.30.035461
ORF1ab/nsp443I43IatCatT99AY.260.000255
ORF1ab/nsp443I43VAtcGtc99AY.440.000055
ORF1ab/nsp443I43IatCatT99AY.46.60.00065
ORF1ab/nsp443I43IatCatT99AY.50.000186
ORF1ab/nsp443I43IatCatT89AY.9.20.000294
ORF1ab/nsp443I43IatCatA19AY.9.20.000037
ORF1ab/nsp443I43delATC---99B.10.000082
ORF1ab/nsp443I43IatCatT99B.1.5610.003573
ORF1ab/nsp443I43IatCatT99C.370.001045
ORF1ab/nsp443I43IatCatT88B.1.177.620.009535
ORF1ab/nsp443I43IatCatT88B.1.2580.000532
ORF1ab/nsp443I43IatCatT88R.10.00072
ORF1ab/nsp443I43IatCatT77A.50.013462
ORF1ab/nsp443I43IatCatT77AY.4.50.000752
ORF1ab/nsp443I43IatCatT77AY.420.000282
ORF1ab/nsp443I43IatCatT77AY.460.000729
ORF1ab/nsp443I43IatCatT77AY.750.000392
ORF1ab/nsp443I43IatCatT77AY.950.005327
ORF1ab/nsp443I43IatCatT77AY.99.20.000645
ORF1ab/nsp443I43IatCatT77B.1.1.5190.000278
ORF1ab/nsp443I43TaTcaCc77B.1.5260.000165
ORF1ab/nsp443I43IatCatT77B.1.5960.00061
ORF1ab/nsp443I43IatCatT77P.1.140.000335
ORF1ab/nsp443I43IatCatT77W.30.036842
ORF1ab/nsp443I43MatCatG66All0.000001
ORF1ab/nsp443I43YATcTAc36All0.000001
ORF1ab/nsp443I43YATCTAT36All0.000001
ORF1ab/nsp443I43IatCatT66AY.116.10.001869
ORF1ab/nsp443I43IatCatT66AY.1170.000507
ORF1ab/nsp443I43IatCatT66AY.350.001398
ORF1ab/nsp443I43delATC---66AY.430.000027
ORF1ab/nsp443I43IatCatT66AY.520.004886
ORF1ab/nsp443I43IatCatT66AY.910.004383
ORF1ab/nsp443I43IatCatT66B.1.1.2940.007595
ORF1ab/nsp443I43TaTcaCc66B.1.1.5190.000238
ORF1ab/nsp443I43IatCatT66B.1.1280.003812
ORF1ab/nsp443I43IatCatT66B.1.177.70.000989
ORF1ab/nsp443I43IatCatT66B.1.177.860.001101
ORF1ab/nsp443I43IatCatT66B.1.2060.004894
ORF1ab/nsp443I43IatCatT66P.20.00112
ORF1ab/nsp443I43TaTcaCc55AY.1030.000031
ORF1ab/nsp443I43IatCatT55AY.1100.000563
ORF1ab/nsp443I43IatCatT55AY.3.10.000426
ORF1ab/nsp443I43TaTcaCc55AY.470.000156
ORF1ab/nsp443I43TaTcaCc55B.1.10.000091
ORF1ab/nsp443I43TaTcaCc55B.1.1.1570.004566
ORF1ab/nsp443I43TaTcaCc55B.1.1.250.002843
ORF1ab/nsp443I43IatCatT55B.1.1.2840.000537
ORF1ab/nsp443I43IatCatT55B.1.1.3690.002231
ORF1ab/nsp443I43IatCatT55B.1.160.160.004647
ORF1ab/nsp443I43IatCatT55B.1.177.350.003455
ORF1ab/nsp443I43IatCatT55B.1.4680.028571
ORF1ab/nsp443I43IatCatT55B.1.6090.002397
ORF1ab/nsp443I43IatCatT55B.1.6210.000443
ORF1ab/nsp443I43YATcTAc240.111111
ORF1ab/nsp443I43NaTcaAc240.111111
ORF1ab/nsp443I43FAtcTtc240.111111
ORF1ab/nsp443I43NaTCaAT240.111111
ORF1ab/nsp443I43FAtCTtT240.111111
ORF1ab/nsp443I43YATCTAT240.111111
ORF1ab/nsp443I43VAtcGtc44AY.1030.000025
ORF1ab/nsp443I43IatCatT44AY.1110.000733
ORF1ab/nsp443I43IatCatT44AY.1190.000141
ORF1ab/nsp443I43IatCatT44AY.1210.000541
ORF1ab/nsp443I43TaTcaCc44AY.160.001519
ORF1ab/nsp443I43TaTcaCc44AY.200.000155
ORF1ab/nsp443I43IatCatT44AY.270.000259
ORF1ab/nsp443I43IatCatT44AY.360.000593
ORF1ab/nsp443I43VAtcGtc44AY.360.000593
ORF1ab/nsp443I43IatCatT44AY.39.10.000158
ORF1ab/nsp443I43delATC---44AY.40.000006
ORF1ab/nsp443I43delATC---44AY.4.50.00043
ORF1ab/nsp443I43LAtcCtc44AY.440.000024
ORF1ab/nsp443I43IatCatT44AY.470.000124
ORF1ab/nsp443I43VAtcGtc44AY.510.003636
ORF1ab/nsp443I43IatCatT44AY.860.00332
ORF1ab/nsp443I43VAtcGtc44AY.90.00027
ORF1ab/nsp443I43IatCatT44B.1.1.1530.004381
ORF1ab/nsp443I43IatCatT44B.1.1.2160.003562
ORF1ab/nsp443I43IatCatT44B.1.1.280.001245
ORF1ab/nsp443I43TaTcaCc44B.1.1770.000053
ORF1ab/nsp443I43delATC---44B.1.1770.000053
ORF1ab/nsp443I43IatCatT44B.1.438.10.000429
ORF1ab/nsp443I43VAtcGtc44B.1.5260.000094
ORF1ab/nsp443I43IatCatT44B.1.6370.000292
ORF1ab/nsp443I43IatCatT33AD.20.000657
ORF1ab/nsp443I43IatCatT33AY.1050.001929
ORF1ab/nsp443I43IatCatT33AY.140.000264
ORF1ab/nsp443I43VAtcGtc33AY.20.001068
ORF1ab/nsp443I43LAtcCtc33AY.40.000005
ORF1ab/nsp443I43FAtcTtc33AY.740.000347
ORF1ab/nsp443I43IatCatT33AY.90.000203
ORF1ab/nsp443I43NaTcaAc33AY.980.000237
ORF1ab/nsp443I43VAtcGtc33B.1.10.000054
ORF1ab/nsp443I43IatCatT33B.1.1.1380.018182
ORF1ab/nsp443I43FAtcTtc33B.1.1.2650.009464
ORF1ab/nsp443I43IatCatT33B.1.1.3060.001315
ORF1ab/nsp443I43LAtcCtc33B.1.1.70.000003
ORF1ab/nsp443I43SaTcaGc33B.1.1.70.000003
ORF1ab/nsp443I43IatCatT33B.1.110.30.002155
ORF1ab/nsp443I43IatCatT33B.1.177.580.003995
ORF1ab/nsp443I43IatCatT33B.1.177.810.000568
ORF1ab/nsp443I43IatCatT33B.1.177.820.001432
ORF1ab/nsp443I43VAtcGtc33B.1.20.000026
ORF1ab/nsp443I43IatCatT33B.1.36.170.001482
ORF1ab/nsp443I43IatCatT33B.1.3610.003866
ORF1ab/nsp443I43LAtcCtc33B.1.438.10.000322
ORF1ab/nsp443I43IatCatT33B.1.4620.021739
ORF1ab/nsp443I43IatCatT33B.1.4700.004213
ORF1ab/nsp443I43LAtcCtc33P.10.000047
ORF1ab/nsp443I43IatCatT33P.1.120.001452
ORF1ab/nsp443I43IatCatT33Q.80.000495
ORF1ab/nsp443I43delATC---220.111111
ORF1ab/nsp443I43IatCatT220.111111
ORF1ab/nsp443I43VAtCGtT220.111111
ORF1ab/nsp443I43IatCatT12A0.000387
ORF1ab/nsp443I43IatCatA12A0.000387
ORF1ab/nsp443I43VAtcGtc22A.10.000564
ORF1ab/nsp443I43del2ATc--c22All0
ORF1ab/nsp443I43del1atCat-12All0
ORF1ab/nsp443I43del1Atc-tc12All0
ORF1ab/nsp443I43TaTcaCc22AY.1010.000981
ORF1ab/nsp443I43TaTcaCc22AY.1020.000053
ORF1ab/nsp443I43IatCatT22AY.1070.000932
ORF1ab/nsp443I43IatCatT22AY.1160.000574
ORF1ab/nsp443I43TaTcaCc22AY.1170.000169
ORF1ab/nsp443I43TaTcaCc22AY.1190.000071
ORF1ab/nsp443I43TaTcaCc22AY.130.000322
ORF1ab/nsp443I43TaTcaCc22AY.140.000176
ORF1ab/nsp443I43IatCatT22AY.160.000759
ORF1ab/nsp443I43TaTcaCc22AY.260.000057
ORF1ab/nsp443I43VAtcGtc22AY.30.00002
ORF1ab/nsp443I43IatCatT22AY.340.000194
ORF1ab/nsp443I43TaTcaCc22AY.390.000049
ORF1ab/nsp443I43NaTcaAc22AY.40.000003
ORF1ab/nsp443I43IatCatT22AY.4.30.001684
ORF1ab/nsp443I43VAtcGtc22AY.4.50.000215
ORF1ab/nsp443I43IatCatT22AY.46.20.001271
ORF1ab/nsp443I43TaTcaCc22AY.46.40.000329
ORF1ab/nsp443I43TaTcaCc22AY.50.000041
ORF1ab/nsp443I43VAtcGtc22AY.540.000191
ORF1ab/nsp443I43IatCatT22AY.7.20.001119
ORF1ab/nsp443I43IatCatT22AY.740.000231
ORF1ab/nsp443I43TaTcaCc22AY.740.000231
ORF1ab/nsp443I43IatCatT22AY.890.009804
ORF1ab/nsp443I43VAtcGtc22B.10.000018
ORF1ab/nsp443I43NaTcaAc12B.10.000009
ORF1ab/nsp443I43NaTCaAT12B.10.000009
ORF1ab/nsp443I43delATC---22B.1.10.000036
ORF1ab/nsp443I43IatCatT22B.1.1.10.000653
ORF1ab/nsp443I43IatCatT22B.1.1.2300.018349
ORF1ab/nsp443I43delATC---22B.1.1.3150.016949
ORF1ab/nsp443I43IatCatA22B.1.1.3970.004505
ORF1ab/nsp443I43IatCatT22B.1.1.4090.005666
ORF1ab/nsp443I43IatCatT22B.1.1.470.010695
ORF1ab/nsp443I43MatCatG22B.1.1.70.000002
ORF1ab/nsp443I43NaTCaAT12B.1.1.70.000001
ORF1ab/nsp443I43YATcTAc12B.1.1.70.000001
ORF1ab/nsp443I43YATCTAT12B.1.1.70.000001
ORF1ab/nsp443I43NaTcaAc12B.1.1.70.000001
ORF1ab/nsp443I43IatCatT22B.1.160.70.004158
ORF1ab/nsp443I43IatCatT22B.1.177.120.000303
ORF1ab/nsp443I43IatCatT22B.1.177.430.002954
ORF1ab/nsp443I43IatCatT22B.1.177.60.001953
ORF1ab/nsp443I43IatCatT22B.1.177.730.001133
ORF1ab/nsp443I43IatCatT22B.1.1950.01005
ORF1ab/nsp443I43TaTcaCc22B.1.20.000018
ORF1ab/nsp443I43IatCatT22B.1.2340.000264
ORF1ab/nsp443I43IatCatT22B.1.36.220.002415
ORF1ab/nsp443I43IatCatT22B.1.4000.000858
ORF1ab/nsp443I43IatCatT22B.1.4090.001563
ORF1ab/nsp443I43VAtcGtc22B.1.4270.000101
ORF1ab/nsp443I43TaTcaCc22B.1.4270.000101
ORF1ab/nsp443I43IatCatT22B.1.4560.006536
ORF1ab/nsp443I43IatCatT22B.1.466.20.000782
ORF1ab/nsp443I43TaTcaCc22B.1.4990.002101
ORF1ab/nsp443I43IatCatT22B.1.5640.000852
ORF1ab/nsp443I43VAtcGtc22B.1.6090.000959
ORF1ab/nsp443I43delATC---22B.1.6210.000177
ORF1ab/nsp443I43IatCatT22M.30.153846
ORF1ab/nsp443I43IatCatT22P.1.100.000539
ORF1ab/nsp443I43IatCatT22Q.30.00029
ORF1ab/nsp443I43TaTcaCc22V.10.045455
ORF1ab/nsp443I43IatCatT11A.10.000282
ORF1ab/nsp443I43IatCatT11A.20.000662
ORF1ab/nsp443I43delATC---11A.2.40.003367
ORF1ab/nsp443I43TaTcaCc11A.2.50.000499
ORF1ab/nsp443I43IatCatT11A.2.5.20.001572
ORF1ab/nsp443I43IatCatT11A.270.001656
ORF1ab/nsp443I43VAtcGtc11AL.10.012987
ORF1ab/nsp443I43KaTCaAA11All0
ORF1ab/nsp443I43EATCGAA11All0
ORF1ab/nsp443I43VAtcGtc11AY.1000.000046
ORF1ab/nsp443I43VAtcGtc11AY.1020.000027
ORF1ab/nsp443I43SaTcaGc11AY.1020.000027
ORF1ab/nsp443I43NaTcaAc11AY.1030.000006
ORF1ab/nsp443I43IatCatT11AY.1040.001984
ORF1ab/nsp443I43TaTcaCc11AY.1060.000335
ORF1ab/nsp443I43IatCatT11AY.1060.000335
ORF1ab/nsp443I43LAtcCtc11AY.1160.000287
ORF1ab/nsp443I43VAtcGtc11AY.1180.000063
ORF1ab/nsp443I43SaTcaGc11AY.1190.000035
ORF1ab/nsp443I43TaTcaCc11AY.120.000316
ORF1ab/nsp443I43VAtcGtc11AY.160.00038
ORF1ab/nsp443I43IatCatT11AY.16.10.00047
ORF1ab/nsp443I43VAtcGtc11AY.190.00114
ORF1ab/nsp443I43IatCatT11AY.190.00114
ORF1ab/nsp443I43VAtcGtc11AY.230.00007
ORF1ab/nsp443I43TaTcaCc11AY.230.00007
ORF1ab/nsp443I43VAtcGtc11AY.23.10.000417
ORF1ab/nsp443I43FAtcTtc11AY.250.000006
ORF1ab/nsp443I43VAtcGtc11AY.260.000028
ORF1ab/nsp443I43IatCatT11AY.280.00189
ORF1ab/nsp443I43VAtcGtc11AY.280.00189
ORF1ab/nsp443I43LAtcCtc11AY.290.000016
ORF1ab/nsp443I43TaTcaCc11AY.29.10.000221
ORF1ab/nsp443I43TaTcaCc11AY.330.000067
ORF1ab/nsp443I43delATC---11AY.330.000067
ORF1ab/nsp443I43delATC---11AY.34.10.00051
ORF1ab/nsp443I43TaTcaCc11AY.360.000148
ORF1ab/nsp443I43IatCatT11AY.380.000499
ORF1ab/nsp443I43SaTcaGc11AY.40.000002
ORF1ab/nsp443I43FAtcTtc11AY.40.000002
ORF1ab/nsp443I43TaTcaCc11AY.4.20.000022
ORF1ab/nsp443I43delATC---11AY.420.00004
ORF1ab/nsp443I43VAtcGtc11AY.420.00004
ORF1ab/nsp443I43SaTcaGc11AY.430.000004
ORF1ab/nsp443I43MatCatG11AY.430.000004
ORF1ab/nsp443I43LAtcCtc11AY.430.000004
ORF1ab/nsp443I43FAtcTtc11AY.440.000006
ORF1ab/nsp443I43SaTcaGc11AY.440.000006
ORF1ab/nsp443I43IatCatT11AY.46.10.001027
ORF1ab/nsp443I43delATC---11AY.46.20.000635
ORF1ab/nsp443I43IatCatT11AY.46.30.000934
ORF1ab/nsp443I43IatCatT11AY.46.40.000165
ORF1ab/nsp443I43LAtcCtc11AY.470.000031
ORF1ab/nsp443I43VAtcGtc11AY.50.000021
ORF1ab/nsp443I43LAtcCtc11AY.5.30.000337
ORF1ab/nsp443I43IatCatT11AY.5.40.000277
ORF1ab/nsp443I43IatCatT11AY.530.000288
ORF1ab/nsp443I43delATC---11AY.590.00053
ORF1ab/nsp443I43delATC---11AY.600.000938
ORF1ab/nsp443I43IatCatT11AY.680.000274
ORF1ab/nsp443I43SaTCaGT11AY.690.000187
ORF1ab/nsp443I43IatCatT11AY.70.000196
ORF1ab/nsp443I43IatCatT11AY.7.10.000113
ORF1ab/nsp443I43IatCatT11AY.710.000475
ORF1ab/nsp443I43VAtcGtc11AY.730.000665
ORF1ab/nsp443I43VAtcGtc11AY.75.10.00018
ORF1ab/nsp443I43VAtcGtc11AY.840.000437
ORF1ab/nsp443I43IatCatT11AY.870.000833
ORF1ab/nsp443I43delATC---11AY.90.000068
ORF1ab/nsp443I43TaTcaCc11AY.9.10.000084
ORF1ab/nsp443I43IatCatT11AY.9.10.000084
ORF1ab/nsp443I43VAtcGtc11AY.960.002075
ORF1ab/nsp443I43VAtcGtc11AY.980.000079
ORF1ab/nsp443I43VAtcGtc11AY.990.001049
ORF1ab/nsp443I43IatCatT11AY.990.001049
ORF1ab/nsp443I43IatCatT11AZ.20.000821
ORF1ab/nsp443I43IatCatA11B0.000128
ORF1ab/nsp443I43TaTcaCc11B0.000128
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ORF1ab/nsp443I43VAtcGtc11B.1.1.1920.002309
ORF1ab/nsp443I43IatCatT11B.1.1.2070.001182
ORF1ab/nsp443I43TaTcaCc11B.1.1.2220.000204
ORF1ab/nsp443I43IatCatT11B.1.1.2310.003096
ORF1ab/nsp443I43SaTcaGc11B.1.1.250.000569
ORF1ab/nsp443I43IatCatT11B.1.1.3020.002075
ORF1ab/nsp443I43IatCatT11B.1.1.3040.002809
ORF1ab/nsp443I43delATC---11B.1.1.3060.000438
ORF1ab/nsp443I43delATC---11B.1.1.3110.000358
ORF1ab/nsp443I43TaTcaCc11B.1.1.3170.000412
ORF1ab/nsp443I43IatCatT11B.1.1.3170.000412
ORF1ab/nsp443I43TaTcaCc11B.1.1.3180.000302
ORF1ab/nsp443I43IatCatT11B.1.1.3760.005952
ORF1ab/nsp443I43IatCatT11B.1.1.3780.007299
ORF1ab/nsp443I43IatCatT11B.1.1.390.00051
ORF1ab/nsp443I43delATC---11B.1.1.4090.002833
ORF1ab/nsp443I43VAtcGtc11B.1.1.4340.000349
ORF1ab/nsp443I43VAtcGtc11B.1.1.5190.00004
ORF1ab/nsp443I43delATC---11B.1.1.5190.00004
ORF1ab/nsp443I43IatCatT11B.1.1.520.012195
ORF1ab/nsp443I43del2ATc--c11B.1.1.70.000001
ORF1ab/nsp443I43IatCatA11B.1.1.700.000341
ORF1ab/nsp443I43delATC---11B.1.1.700.000341
ORF1ab/nsp443I43IatCatT11B.1.1.910.166667
ORF1ab/nsp443I43IatCatT11B.1.1.990.02381
ORF1ab/nsp443I43IatCatT11B.1.1190.010526
ORF1ab/nsp443I43VAtcGtc11B.1.1280.000635
ORF1ab/nsp443I43IatCatT11B.1.1390.000733
ORF1ab/nsp443I43delATC---11B.1.1400.018868
ORF1ab/nsp443I43IatCatT11B.1.1490.003425
ORF1ab/nsp443I43MatCatG11B.1.1600.000031
ORF1ab/nsp443I43LAtcCtc11B.1.1600.000031
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ORF1ab/nsp443I43IatCatT11B.1.160.140.002119
ORF1ab/nsp443I43IatCatT11B.1.160.200.008929
ORF1ab/nsp443I43IatCatT11B.1.160.280.002924
ORF1ab/nsp443I43IatCatT11B.1.177.160.000664
ORF1ab/nsp443I43IatCatT11B.1.177.200.001517
ORF1ab/nsp443I43IatCatT11B.1.177.320.00135
ORF1ab/nsp443I43VAtcGtc11B.1.177.40.000211
ORF1ab/nsp443I43IatCatT11B.1.177.40.000211
ORF1ab/nsp443I43delATC---11B.1.177.570.000281
ORF1ab/nsp443I43delATC---11B.1.177.620.001192
ORF1ab/nsp443I43delATC---11B.1.177.630.002703
ORF1ab/nsp443I43delATC---11B.1.177.70.000165
ORF1ab/nsp443I43IatCatT11B.1.177.750.001041
ORF1ab/nsp443I43delATC---11B.1.177.830.001481
ORF1ab/nsp443I43delATC---11B.1.20.000009
ORF1ab/nsp443I43KaTCaAA11B.1.20.000009
ORF1ab/nsp443I43IatCatT11B.1.2100.002132
ORF1ab/nsp443I43IatCatT11B.1.2140.003663
ORF1ab/nsp443I43delATC---11B.1.221.10.002907
ORF1ab/nsp443I43IatCatT11B.1.230.006061
ORF1ab/nsp443I43IatCatT11B.1.2360.002053
ORF1ab/nsp443I43IatCatT11B.1.2390.001221
ORF1ab/nsp443I43IatCatT11B.1.2400.000216
ORF1ab/nsp443I43TaTcaCc11B.1.2430.00007
ORF1ab/nsp443I43NaTcaAc11B.1.2500.014493
ORF1ab/nsp443I43IatCatT11B.1.258.170.000104
ORF1ab/nsp443I43IatCatT11B.1.2600.003344
ORF1ab/nsp443I43IatCatT11B.1.2650.001271
ORF1ab/nsp443I43IatCatT11B.1.2790.000514
ORF1ab/nsp443I43IatCatT11B.1.3060.005714
ORF1ab/nsp443I43IatCatT11B.1.3200.001245
ORF1ab/nsp443I43IatCatT11B.1.3400.004292
ORF1ab/nsp443I43IatCatT11B.1.3500.002933
ORF1ab/nsp443I43TaTcaCc11B.1.3510.00003
ORF1ab/nsp443I43IatCatT11B.1.351.20.000303
ORF1ab/nsp443I43delATC---11B.1.360.000146
ORF1ab/nsp443I43IatCatT11B.1.36.120.009615
ORF1ab/nsp443I43VAtcGtc11B.1.36.180.00042
ORF1ab/nsp443I43del1atCat-11B.1.36.290.000517
ORF1ab/nsp443I43TaTcaCc11B.1.3690.000285
ORF1ab/nsp443I43IatCatT11B.1.4010.008197
ORF1ab/nsp443I43IatCatT11B.1.4230.010204
ORF1ab/nsp443I43LAtcCtc11B.1.4270.00005
ORF1ab/nsp443I43IatCatT11B.1.4990.00105
ORF1ab/nsp443I43TaTcaCc11B.1.5230.002451
ORF1ab/nsp443I43MatCatG11B.1.5250.000113
ORF1ab/nsp443I43IatCatT11B.1.5440.006024
ORF1ab/nsp443I43IatCatT11B.1.5750.000303
ORF1ab/nsp443I43VAtcGtc11B.1.5770.000687
ORF1ab/nsp443I43IatCatT11B.1.5820.000491
ORF1ab/nsp443I43IatCatT11B.1.5890.007576
ORF1ab/nsp443I43IatCatT11B.1.5900.004545
ORF1ab/nsp443I43delATC---11B.1.5960.000087
ORF1ab/nsp443I43TaTcaCc11B.1.6060.006024
ORF1ab/nsp443I43delATC---11B.1.617.10.000129
ORF1ab/nsp443I43SaTcaGc11B.1.617.20.000004
ORF1ab/nsp443I43NaTcaAc11B.1.617.20.000004
ORF1ab/nsp443I43delATC---11B.1.617.20.000004
ORF1ab/nsp443I43del2ATc--c11B.1.617.20.000004
ORF1ab/nsp443I43IatCatT11B.1.619.10.000641
ORF1ab/nsp443I43NaTcaAc11B.1.6200.000946
ORF1ab/nsp443I43del1Atc-tc11B.1.6210.000089
ORF1ab/nsp443I43IatCatT11B.1.6270.00202
ORF1ab/nsp443I43IatCatT11B.1.970.025641
ORF1ab/nsp443I43IatCatT11B.3.10.001658
ORF1ab/nsp443I43IatCatA11B.40.002208
ORF1ab/nsp443I43IatCatA11B.60.00091
ORF1ab/nsp443I43IatCatA11B.6.60.000889
ORF1ab/nsp443I43IatCatT11C.140.004329
ORF1ab/nsp443I43IatCatT11C.180.002591
ORF1ab/nsp443I43IatCatT11C.350.000774
ORF1ab/nsp443I43EATCGAA11C.350.000774
ORF1ab/nsp443I43IatCatT11C.360.000911
ORF1ab/nsp443I43delATC---11C.370.000116
ORF1ab/nsp443I43VAtcGtc11C.370.000116
ORF1ab/nsp443I43MatCatG11D.20.000075
ORF1ab/nsp443I43IatCatT11D.20.000075
ORF1ab/nsp443I43NaTcaAc11D.20.000075
ORF1ab/nsp443I43IatCatT11N.30.005814
ORF1ab/nsp443I43VAtcGtc11N.50.001767
ORF1ab/nsp443I43VAtcGtc11P.10.000016
ORF1ab/nsp443I43delATC---11P.10.000016
ORF1ab/nsp443I43FAtcTtc11P.10.000016
ORF1ab/nsp443I43IatCatT11P.1.160.000374
ORF1ab/nsp443I43IatCatT11P.1.40.000977
ORF1ab/nsp443I43IatCatT11P.1.70.000319
ORF1ab/nsp443I43TaTcaCc11Q.10.000126
ORF1ab/nsp443I43delATC---11U.30.003861
ORF1ab/nsp443I43IatCatT11W.40.001351