CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 417 & Codon = ctA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4417L417LL3180LsynctGctA186804050.02168099803-9805

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4417L417LctGctA40518680All0.000077
ORF1ab/nsp4417L417LctGctA232889AY.40.000036
ORF1ab/nsp4417L417LctGctA341910B.1.1.70.00003
ORF1ab/nsp4417L417LctGctA21301AY.430.000009
ORF1ab/nsp4417L417LctGctA281152B.1.617.20.000105
ORF1ab/nsp4417L417LctGctA7631B.1.20.000062
ORF1ab/nsp4417L417LctGctA31481AY.250.000186
ORF1ab/nsp4417L417LctGctA2237AY.440.000012
ORF1ab/nsp4417L417LctGctA1236AY.390.000025
ORF1ab/nsp4417L417LctGctA1220B.1.1770.000013
ORF1ab/nsp4417L417LctGctA101210B.1.3510.003002
ORF1ab/nsp4417L417LctGctA23189B.10.000211
ORF1ab/nsp4417L417LctGctA14182P.10.000221
ORF1ab/nsp4417L417LctGctA10179AY.1030.000062
ORF1ab/nsp4417L417LctGctA4143AY.60.000165
ORF1ab/nsp4417L417LctGctA3109AY.420.000121
ORF1ab/nsp4417L417LctGctA494AY.30.00004
ORF1ab/nsp4417L417LctGctA686B.1.10.000109
ORF1ab/nsp4417L417LctGctA282B.1.4270.000101
ORF1ab/nsp4417L417LctGctA264B.1.5260.000047
ORF1ab/nsp4417L417LctGctA250AY.750.000112
ORF1ab/nsp4417L417LctGctA842P.20.001493
ORF1ab/nsp4417L417LctGctA240AY.200.000078
ORF1ab/nsp4417L417LctGctA136AY.1190.000035
ORF1ab/nsp4417L417LctGctA133AY.260.000028
ORF1ab/nsp4417L417LctGctA129AY.1000.000046
ORF1ab/nsp4417L417LctGctA121AY.50.000021
ORF1ab/nsp4417L417LctGctA120AY.470.000031
ORF1ab/nsp4417L417LctGctA117C.370.000116
ORF1ab/nsp4417L417LctGctA215AY.230.000139
ORF1ab/nsp4417L417LctGctA1414B.1.221.40.058333
ORF1ab/nsp4417L417LctGctA814B.1.5750.002427
ORF1ab/nsp4417L417LctGctA210AY.1160.000574
ORF1ab/nsp4417L417LctGctA110B.1.5610.000397
ORF1ab/nsp4417L417LctGctA19B.1.5950.000261
ORF1ab/nsp4417L417LctGctA180.055556
ORF1ab/nsp4417L417LctGctA88B.1.5370.16
ORF1ab/nsp4417L417LctGctA67B.1.1.3260.010563
ORF1ab/nsp4417L417LctGctA66B.1.1.2630.009346
ORF1ab/nsp4417L417LctGctA66B.1.5680.006667
ORF1ab/nsp4417L417LctGctA56B.1.6230.002682
ORF1ab/nsp4417L417LctGctA15AY.1180.000063
ORF1ab/nsp4417L417LctGctA25B.1.5820.000981
ORF1ab/nsp4417L417LctGctA13B.1.1.1760.000439
ORF1ab/nsp4417L417LctGctA13B.1.1.3480.000796
ORF1ab/nsp4417L417LctGctA33B.1.6090.001438
ORF1ab/nsp4417L417LctGctA23P.1.100.000539
ORF1ab/nsp4417L417LctGctA13P.1.150.000232
ORF1ab/nsp4417L417LctGctA22AY.480.00093
ORF1ab/nsp4417L417LctGctA12AY.530.000288
ORF1ab/nsp4417L417LctGctA22B.1.177.500.00939
ORF1ab/nsp4417L417LctGctA22B.1.5640.000852
ORF1ab/nsp4417L417LctGctA11AU.30.00211
ORF1ab/nsp4417L417LctGctA11AY.240.000431
ORF1ab/nsp4417L417LctGctA11B.1.1.2850.006536
ORF1ab/nsp4417L417LctGctA11B.1.1.3550.015385
ORF1ab/nsp4417L417LctGctA11B.1.1.750.010638
ORF1ab/nsp4417L417LctGctA11B.1.1.930.025641
ORF1ab/nsp4417L417LctGctA11B.1.177.120.000152
ORF1ab/nsp4417L417LctGctA11B.1.30.002618
ORF1ab/nsp4417L417LctGctA11B.1.3490.000715
ORF1ab/nsp4417L417LctGctA11B.1.36.380.001642
ORF1ab/nsp4417L417LctGctA11N.30.005814