CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 401

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
ORF1ab/nsp4	401	R401H	R3164H	nonsyn	cGt	cAt	2197	2197	1	9755-9757
ORF1ab/nsp4	401	R401R	R3164R	syn	cgT	cgC	281	273	0.97153	9755-9757
ORF1ab/nsp4	401	R401R	R3164R	syn	cgT	cgG	281	5	0.0177936	9755-9757
ORF1ab/nsp4	401	R401R	R3164R	syn	cgT	cgA	281	3	0.0106762	9755-9757
ORF1ab/nsp4	401	R401del	R3164del	del	CGT	---	100	100	1	9755-9757
ORF1ab/nsp4	401	R401L	R3164L	nonsyn	cGt	cTt	80	79	0.9875	9755-9757
ORF1ab/nsp4	401	R401L	R3164L	nonsyn	cGT	cTC	80	1	0.0125	9755-9757
ORF1ab/nsp4	401	R401C	R3164C	nonsyn	Cgt	Tgt	14	14	1	9755-9757
ORF1ab/nsp4	401	R401S	R3164S	nonsyn	Cgt	Agt	11	11	1	9755-9757
ORF1ab/nsp4	401	R401del2	R3164del2	del	cGT	c--	8	7	0.875	9755-9757
ORF1ab/nsp4	401	R401del2	R3164del2	del	CGt	--t	8	1	0.125	9755-9757
ORF1ab/nsp4	401	R401del1	R3164del1	del	cGt	c-t	6	2	0.333333	9755-9757
ORF1ab/nsp4	401	R401del1	R3164del1	del	CgT	Gg-	6	2	0.333333	9755-9757
ORF1ab/nsp4	401	R401del1	R3164del1	del	Cgt	-gt	6	2	0.333333	9755-9757
ORF1ab/nsp4	401	R401P	R3164P	nonsyn	cGt	cCt	3	2	0.666667	9755-9757
ORF1ab/nsp4	401	R401P	R3164P	nonsyn	cGT	cCA	3	1	0.333333	9755-9757
ORF1ab/nsp4	401	R401Q	R3164Q	nonsyn	cGT	cAG	2	2	1	9755-9757
ORF1ab/nsp4	401	R401G	R3164G	nonsyn	Cgt	Ggt	2	2	1	9755-9757
ORF1ab/nsp4	401	R401I	R3164I	nonsyn	CGt	ATt	1	1	1	9755-9757

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
ORF1ab/nsp4	401	R401H	cGt	cAt	2197	2197	All	0.00042
ORF1ab/nsp4	401	R401H	cGt	cAt	847	847	B.1.1.7	0.000758
ORF1ab/nsp4	401	R401H	cGt	cAt	469	469	B.1.627	0.947475
ORF1ab/nsp4	401	R401H	cGt	cAt	291	291	B.1.631	0.979798
ORF1ab/nsp4	401	R401R	cgT	cgC	273	281	All	0.000052
ORF1ab/nsp4	401	R401R	cgT	cgG	5	281	All	0.000001
ORF1ab/nsp4	401	R401R	cgT	cgA	3	281	All	0.000001
ORF1ab/nsp4	401	R401H	cGt	cAt	140	140	B.1.1.528	0.673077
ORF1ab/nsp4	401	R401R	cgT	cgC	113	113	B.1.139	0.082845
ORF1ab/nsp4	401	R401del	CGT	---	100	100	All	0.000019
ORF1ab/nsp4	401	R401H	cGt	cAt	91	91	AY.4	0.000142
ORF1ab/nsp4	401	R401L	cGt	cTt	79	80	All	0.000015
ORF1ab/nsp4	401	R401L	cGT	cTC	1	80	All	0
ORF1ab/nsp4	401	R401H	cGt	cAt	51	51	AY.118	0.003195
ORF1ab/nsp4	401	R401del	CGT	---	42	42	B.1.1.7	0.000038
ORF1ab/nsp4	401	R401H	cGt	cAt	39	39	B.1	0.000357
ORF1ab/nsp4	401	R401H	cGt	cAt	33	33	B.1.160	0.001029
ORF1ab/nsp4	401	R401H	cGt	cAt	25	25	AY.37	0.007901
ORF1ab/nsp4	401	R401L	cGt	cTt	24	24	A.2.4	0.080808
ORF1ab/nsp4	401	R401H	cGt	cAt	21	21	AY.3	0.000209
ORF1ab/nsp4	401	R401R	cgT	cgC	21	21	B.1.1.7	0.000019
ORF1ab/nsp4	401	R401R	cgT	cgC	21	21	B.1.351	0.000624
ORF1ab/nsp4	401	R401H	cGt	cAt	21	21	B.1.576	0.019039
ORF1ab/nsp4	401	R401R	cgT	cgC	19	19	AY.103	0.000118
ORF1ab/nsp4	401	R401R	cgT	cgC	15	15	B.1.617.2	0.000056
ORF1ab/nsp4	401	R401C	Cgt	Tgt	14	14	All	0.000003
ORF1ab/nsp4	401	R401H	cGt	cAt	14	14	AY.43	0.000062
ORF1ab/nsp4	401	R401H	cGt	cAt	14	14	B.1.1	0.000254
ORF1ab/nsp4	401	R401R	cgT	cgC	11	12	B.1	0.000101
ORF1ab/nsp4	401	R401R	cgT	cgG	1	12	B.1	0.000009
ORF1ab/nsp4	401	R401R	cgT	cgC	12	12	B.1.177.85	0.065217
ORF1ab/nsp4	401	R401S	Cgt	Agt	11	11	All	0.000002
ORF1ab/nsp4	401	R401H	cGt	cAt	11	11	AY.103	0.000068
ORF1ab/nsp4	401	R401R	cgT	cgC	11	11	B.1.1.519	0.000437
ORF1ab/nsp4	401	R401H	cGt	cAt	11	11	B.1.617.2	0.000041
ORF1ab/nsp4	401	R401L	cGt	cTt	10	10	B.1.1.7	0.000009
ORF1ab/nsp4	401	R401del	CGT	---	10	10	B.1.177	0.000132
ORF1ab/nsp4	401	R401H	cGt	cAt	10	10	B.1.2	0.000088
ORF1ab/nsp4	401	R401H	cGt	cAt	9	9	AY.25	0.000054
ORF1ab/nsp4	401	R401H	cGt	cAt	9	9	AY.44	0.000055
ORF1ab/nsp4	401	R401del2	cGT	c--	7	8	All	0.000001
ORF1ab/nsp4	401	R401del2	CGt	--t	1	8	All	0
ORF1ab/nsp4	401	R401H	cGt	cAt	7	7	AF.1	0.259259
ORF1ab/nsp4	401	R401del	CGT	---	7	7	AY.4	0.000011
ORF1ab/nsp4	401	R401H	cGt	cAt	7	7	AY.47	0.000218
ORF1ab/nsp4	401	R401L	cGt	cTt	6	6	A.2.5	0.002994
ORF1ab/nsp4	401	R401del1	CgT	Gg-	2	6	All	0
ORF1ab/nsp4	401	R401del1	Cgt	-gt	2	6	All	0
ORF1ab/nsp4	401	R401del1	cGt	c-t	2	6	All	0
ORF1ab/nsp4	401	R401L	cGt	cTt	6	6	AY.25	0.000036
ORF1ab/nsp4	401	R401del	CGT	---	6	6	AY.4.5	0.000645
ORF1ab/nsp4	401	R401H	cGt	cAt	6	6	B.1.1.34	0.078947
ORF1ab/nsp4	401	R401H	cGt	cAt	6	6	B.1.351	0.000178
ORF1ab/nsp4	401	R401R	cgT	cgC	5	5	AY.4	0.000008
ORF1ab/nsp4	401	R401L	cGt	cTt	5	5	AY.44	0.00003
ORF1ab/nsp4	401	R401R	cgT	cgC	2	5	D.2	0.00015
ORF1ab/nsp4	401	R401R	cgT	cgG	2	5	D.2	0.00015
ORF1ab/nsp4	401	R401R	cgT	cgA	1	5	D.2	0.000075
ORF1ab/nsp4	401	R401L	cGt	cTt	4	4	AY.103	0.000025
ORF1ab/nsp4	401	R401H	cGt	cAt	4	4	AY.119	0.000141
ORF1ab/nsp4	401	R401del	CGT	---	4	4	AY.43	0.000018
ORF1ab/nsp4	401	R401H	cGt	cAt	4	4	B.1.1.519	0.000159
ORF1ab/nsp4	401	R401R	cgT	cgC	4	4	B.1.2	0.000035
ORF1ab/nsp4	401	R401P	cGt	cCt	2	3	All	0
ORF1ab/nsp4	401	R401P	cGT	cCA	1	3	All	0
ORF1ab/nsp4	401	R401L	cGt	cTt	3	3	AY.102	0.00008
ORF1ab/nsp4	401	R401H	cGt	cAt	3	3	AY.23	0.000209
ORF1ab/nsp4	401	R401R	cgT	cgC	3	3	AY.29	0.000047
ORF1ab/nsp4	401	R401L	cGt	cTt	3	3	AY.4	0.000005
ORF1ab/nsp4	401	R401R	cgT	cgC	3	3	AY.43	0.000013
ORF1ab/nsp4	401	R401R	cgT	cgC	3	3	AY.54	0.000286
ORF1ab/nsp4	401	R401H	cGt	cAt	3	3	B.1.1.523	0.004687
ORF1ab/nsp4	401	R401R	cgT	cgC	3	3	B.1.177	0.00004
ORF1ab/nsp4	401	R401R	cgT	cgC	3	3	C.37	0.000348
ORF1ab/nsp4	401	R401G	Cgt	Ggt	2	2		0.111111
ORF1ab/nsp4	401	R401Q	cGT	cAG	2	2		0.111111
ORF1ab/nsp4	401	R401S	Cgt	Agt	2	2		0.111111
ORF1ab/nsp4	401	R401del1	CgT	Gg-	2	2		0.111111
ORF1ab/nsp4	401	R401H	cGt	cAt	2	2	AD.2	0.000438
ORF1ab/nsp4	401	R401G	Cgt	Ggt	2	2	All	0
ORF1ab/nsp4	401	R401Q	cGT	cAG	2	2	All	0
ORF1ab/nsp4	401	R401R	cgT	cgC	2	2	AY.102	0.000053
ORF1ab/nsp4	401	R401H	cGt	cAt	2	2	AY.29	0.000032
ORF1ab/nsp4	401	R401L	cGt	cTt	2	2	AY.29	0.000032
ORF1ab/nsp4	401	R401H	cGt	cAt	2	2	AY.34	0.000194
ORF1ab/nsp4	401	R401H	cGt	cAt	2	2	AY.7.2	0.001119
ORF1ab/nsp4	401	R401H	cGt	cAt	2	2	B	0.000256
ORF1ab/nsp4	401	R401S	Cgt	Agt	2	2	B.1	0.000018
ORF1ab/nsp4	401	R401C	Cgt	Tgt	2	2	B.1.1	0.000036
ORF1ab/nsp4	401	R401del	CGT	---	2	2	B.1.1	0.000036
ORF1ab/nsp4	401	R401R	cgT	cgC	2	2	B.1.1	0.000036
ORF1ab/nsp4	401	R401H	cGt	cAt	2	2	B.1.1.207	0.002364
ORF1ab/nsp4	401	R401H	cGt	cAt	2	2	B.1.1.241	0.004141
ORF1ab/nsp4	401	R401H	cGt	cAt	2	2	B.1.1.25	0.001137
ORF1ab/nsp4	401	R401S	Cgt	Agt	2	2	B.1.1.7	0.000002
ORF1ab/nsp4	401	R401C	Cgt	Tgt	2	2	B.1.1.7	0.000002
ORF1ab/nsp4	401	R401del	CGT	---	2	2	B.1.177.58	0.002663
ORF1ab/nsp4	401	R401del	CGT	---	2	2	B.1.2	0.000018
ORF1ab/nsp4	401	R401R	cgT	cgC	2	2	B.1.36	0.000292
ORF1ab/nsp4	401	R401H	cGt	cAt	2	2	B.1.400	0.000858
ORF1ab/nsp4	401	R401P	cGT	cCA	1	2	B.1.416	0.001269
ORF1ab/nsp4	401	R401P	cGt	cCt	1	2	B.1.416	0.001269
ORF1ab/nsp4	401	R401R	cgT	cgC	2	2	B.1.596	0.000174
ORF1ab/nsp4	401	R401S	Cgt	Agt	2	2	B.1.617.2	0.000008
ORF1ab/nsp4	401	R401L	cGt	cTt	2	2	B.1.617.2	0.000008
ORF1ab/nsp4	401	R401del2	cGT	c--	2	2	B.1.617.2	0.000008
ORF1ab/nsp4	401	R401H	cGt	cAt	2	2	P.1	0.000032
ORF1ab/nsp4	401	R401L	cGt	cTt	1	1	A	0.000387
ORF1ab/nsp4	401	R401L	cGt	cTt	1	1	A.2	0.000662
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	A.2	0.000662
ORF1ab/nsp4	401	R401del	CGT	---	1	1	AD.2	0.000219
ORF1ab/nsp4	401	R401I	CGt	ATt	1	1	All	0
ORF1ab/nsp4	401	R401C	Cgt	Tgt	1	1	AT.1	0.005128
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	AY.102	0.000027
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	AY.114	0.000231
ORF1ab/nsp4	401	R401R	cgT	cgC	1	1	AY.117	0.000085
ORF1ab/nsp4	401	R401R	cgT	cgC	1	1	AY.119	0.000035
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	AY.12	0.000316
ORF1ab/nsp4	401	R401R	cgT	cgC	1	1	AY.120	0.000037
ORF1ab/nsp4	401	R401L	cGt	cTt	1	1	AY.120.2	0.001285
ORF1ab/nsp4	401	R401L	cGt	cTt	1	1	AY.14	0.000088
ORF1ab/nsp4	401	R401del	CGT	---	1	1	AY.19	0.00114
ORF1ab/nsp4	401	R401R	cgT	cgC	1	1	AY.20	0.000039
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	AY.20	0.000039
ORF1ab/nsp4	401	R401del	CGT	---	1	1	AY.25	0.000006
ORF1ab/nsp4	401	R401R	cgT	cgC	1	1	AY.25	0.000006
ORF1ab/nsp4	401	R401L	cGt	cTt	1	1	AY.3	0.00001
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	AY.4.2	0.000022
ORF1ab/nsp4	401	R401del	CGT	---	1	1	AY.4.3	0.000842
ORF1ab/nsp4	401	R401L	cGt	cTt	1	1	AY.42	0.00004
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	AY.42	0.00004
ORF1ab/nsp4	401	R401L	cGt	cTt	1	1	AY.43	0.000004
ORF1ab/nsp4	401	R401del1	cGt	c-t	1	1	AY.44	0.000006
ORF1ab/nsp4	401	R401I	CGt	ATt	1	1	AY.44	0.000006
ORF1ab/nsp4	401	R401C	Cgt	Tgt	1	1	AY.44	0.000006
ORF1ab/nsp4	401	R401del2	cGT	c--	1	1	AY.44	0.000006
ORF1ab/nsp4	401	R401R	cgT	cgC	1	1	AY.46	0.000104
ORF1ab/nsp4	401	R401del	CGT	---	1	1	AY.46.2	0.000635
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	AY.5	0.000021
ORF1ab/nsp4	401	R401del	CGT	---	1	1	AY.6	0.000041
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	AY.6	0.000041
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	AY.61	0.000105
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	AY.64	0.000595
ORF1ab/nsp4	401	R401del	CGT	---	1	1	AY.68	0.000274
ORF1ab/nsp4	401	R401L	cGT	cTC	1	1	AY.84	0.000437
ORF1ab/nsp4	401	R401del	CGT	---	1	1	AY.9	0.000068
ORF1ab/nsp4	401	R401del1	Cgt	-gt	1	1	AY.9.2	0.000037
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	AY.98.1	0.000048
ORF1ab/nsp4	401	R401del2	cGT	c--	1	1	AY.99	0.001049
ORF1ab/nsp4	401	R401del	CGT	---	1	1	AY.99.1	0.001553
ORF1ab/nsp4	401	R401del2	cGT	c--	1	1	B.1	0.000009
ORF1ab/nsp4	401	R401C	Cgt	Tgt	1	1	B.1	0.000009
ORF1ab/nsp4	401	R401del1	cGt	c-t	1	1	B.1	0.000009
ORF1ab/nsp4	401	R401L	cGt	cTt	1	1	B.1.1	0.000018
ORF1ab/nsp4	401	R401S	Cgt	Agt	1	1	B.1.1	0.000018
ORF1ab/nsp4	401	R401S	Cgt	Agt	1	1	B.1.1.139	0.022727
ORF1ab/nsp4	401	R401L	cGt	cTt	1	1	B.1.1.269	0.001353
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	B.1.1.28	0.000311
ORF1ab/nsp4	401	R401R	cgT	cgC	1	1	B.1.1.286	0.002899
ORF1ab/nsp4	401	R401del2	CGt	--t	1	1	B.1.1.37	0.000193
ORF1ab/nsp4	401	R401R	cgT	cgC	1	1	B.1.1.382	0.035714
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	B.1.1.448	0.002033
ORF1ab/nsp4	401	R401R	cgT	cgC	1	1	B.1.1.50	0.000679
ORF1ab/nsp4	401	R401del2	cGT	c--	1	1	B.1.1.7	0.000001
ORF1ab/nsp4	401	R401del	CGT	---	1	1	B.1.1.70	0.000341
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	B.1.157	0.002985
ORF1ab/nsp4	401	R401R	cgT	cgC	1	1	B.1.160	0.000031
ORF1ab/nsp4	401	R401L	cGt	cTt	1	1	B.1.160	0.000031
ORF1ab/nsp4	401	R401L	cGt	cTt	1	1	B.1.160.22	0.006757
ORF1ab/nsp4	401	R401R	cgT	cgC	1	1	B.1.160.29	0.004219
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	B.1.177	0.000013
ORF1ab/nsp4	401	R401del	CGT	---	1	1	B.1.177.11	0.001698
ORF1ab/nsp4	401	R401R	cgT	cgC	1	1	B.1.177.16	0.000664
ORF1ab/nsp4	401	R401del	CGT	---	1	1	B.1.177.16	0.000664
ORF1ab/nsp4	401	R401del	CGT	---	1	1	B.1.177.17	0.000821
ORF1ab/nsp4	401	R401del	CGT	---	1	1	B.1.177.4	0.000211
ORF1ab/nsp4	401	R401del	CGT	---	1	1	B.1.177.54	0.000606
ORF1ab/nsp4	401	R401del	CGT	---	1	1	B.1.177.56	0.000668
ORF1ab/nsp4	401	R401del	CGT	---	1	1	B.1.177.69	0.001484
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	B.1.177.73	0.000566
ORF1ab/nsp4	401	R401del	CGT	---	1	1	B.1.177.76	0.002494
ORF1ab/nsp4	401	R401C	Cgt	Tgt	1	1	B.1.177.77	0.000726
ORF1ab/nsp4	401	R401del1	Cgt	-gt	1	1	B.1.2	0.000009
ORF1ab/nsp4	401	R401C	Cgt	Tgt	1	1	B.1.2	0.000009
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	B.1.206	0.000816
ORF1ab/nsp4	401	R401L	cGt	cTt	1	1	B.1.206	0.000816
ORF1ab/nsp4	401	R401S	Cgt	Agt	1	1	B.1.214.2	0.0006
ORF1ab/nsp4	401	R401R	cgT	cgG	1	1	B.1.258.11	0.000396
ORF1ab/nsp4	401	R401del	CGT	---	1	1	B.1.258.3	0.001675
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	B.1.356	0.001727
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	B.1.36	0.000146
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	B.1.36.29	0.000517
ORF1ab/nsp4	401	R401del	CGT	---	1	1	B.1.36.38	0.001642
ORF1ab/nsp4	401	R401R	cgT	cgC	1	1	B.1.381	0.007812
ORF1ab/nsp4	401	R401del2	cGT	c--	1	1	B.1.396	0.000706
ORF1ab/nsp4	401	R401C	Cgt	Tgt	1	1	B.1.396	0.000706
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	B.1.398	0.002976
ORF1ab/nsp4	401	R401R	cgT	cgA	1	1	B.1.416	0.001269
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	B.1.427	0.00005
ORF1ab/nsp4	401	R401L	cGt	cTt	1	1	B.1.429	0.000024
ORF1ab/nsp4	401	R401P	cGt	cCt	1	1	B.1.429	0.000024
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	B.1.429	0.000024
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	B.1.436	0.001029
ORF1ab/nsp4	401	R401R	cgT	cgG	1	1	B.1.466.2	0.000391
ORF1ab/nsp4	401	R401R	cgT	cgC	1	1	B.1.509	0.000866
ORF1ab/nsp4	401	R401R	cgT	cgA	1	1	B.1.568	0.001111
ORF1ab/nsp4	401	R401L	cGt	cTt	1	1	B.1.575	0.000303
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	B.1.575.1	0.002439
ORF1ab/nsp4	401	R401C	Cgt	Tgt	1	1	B.1.580	0.004065
ORF1ab/nsp4	401	R401C	Cgt	Tgt	1	1	B.1.596	0.000087
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	B.1.596	0.000087
ORF1ab/nsp4	401	R401del	CGT	---	1	1	B.1.617.1	0.000129
ORF1ab/nsp4	401	R401del	CGT	---	1	1	B.1.617.2	0.000004
ORF1ab/nsp4	401	R401C	Cgt	Tgt	1	1	B.1.617.2	0.000004
ORF1ab/nsp4	401	R401R	cgT	cgC	1	1	B.1.620	0.000946
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	B.1.628	0.000352
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	C.14	0.004329
ORF1ab/nsp4	401	R401del	CGT	---	1	1	C.35	0.000774
ORF1ab/nsp4	401	R401C	Cgt	Tgt	1	1	D.2	0.000075
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	D.2	0.000075
ORF1ab/nsp4	401	R401R	cgT	cgC	1	1	P.1	0.000016
ORF1ab/nsp4	401	R401H	cGt	cAt	1	1	Q.1	0.000126
ORF1ab/nsp4	401	R401del	CGT	---	1	1	Q.1	0.000126
ORF1ab/nsp4	401	R401del	CGT	---	1	1	U.3	0.003861

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.