CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 390 & Codon = Atc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4390F390IF3153InonsynTtcAtc252519722-9724

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4390F390ITtcAtc2525All0.000005
ORF1ab/nsp4390F390ITtcAtc55AY.1000.00023
ORF1ab/nsp4390F390ITtcAtc55B.1.617.20.000019
ORF1ab/nsp4390F390ITtcAtc44AY.250.000024
ORF1ab/nsp4390F390ITtcAtc44AY.40.000006
ORF1ab/nsp4390F390ITtcAtc11AY.1060.000335
ORF1ab/nsp4390F390ITtcAtc11AY.34.10.00051
ORF1ab/nsp4390F390ITtcAtc11AY.39.20.001541
ORF1ab/nsp4390F390ITtcAtc11B.10.000009
ORF1ab/nsp4390F390ITtcAtc11B.1.1.3160.000925
ORF1ab/nsp4390F390ITtcAtc11B.1.1.580.005376
ORF1ab/nsp4390F390ITtcAtc11P.1.10.000318