CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 384 & Codon = CTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4384C384LC3147LnonsynTGtCTt100950.959704-9706

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4384C384LTGtCTt95100All0.000018
ORF1ab/nsp4384C384LTGtCTt5151AY.920.014651
ORF1ab/nsp4384C384LTGtCTt88B.1.360.001167
ORF1ab/nsp4384C384LTGtCTt66B.1.4270.000303
ORF1ab/nsp4384C384LTGtCTt55B.1.1.2220.00102
ORF1ab/nsp4384C384LTGtCTt44B.1.4290.000094
ORF1ab/nsp4384C384LTGtCTt33B.1.20.000026
ORF1ab/nsp4384C384LTGtCTt33B.1.2580.0002
ORF1ab/nsp4384C384LTGtCTt22AY.30.00002
ORF1ab/nsp4384C384LTGtCTt22B.1.1770.000026
ORF1ab/nsp4384C384LTGtCTt22B.1.3510.000059
ORF1ab/nsp4384C384LTGtCTt22B.1.617.20.000008
ORF1ab/nsp4384C384LTGtCTt11A.10.000282
ORF1ab/nsp4384C384LTGtCTt11AY.260.000028
ORF1ab/nsp4384C384LTGtCTt11AY.330.000067
ORF1ab/nsp4384C384LTGtCTt11AY.40.000002
ORF1ab/nsp4384C384LTGtCTt11AY.450.000122
ORF1ab/nsp4384C384LTGtCTt11B.1.1.280.000311
ORF1ab/nsp4384C384LTGtCTt11B.400.000364