CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 371 & Codon = Tct

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4371P371SP3134SnonsynCctTct161916180.9993829665-9667

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4371P371SCctTct16181619All0.000309
ORF1ab/nsp4371P371SCctTct349349AY.250.002099
ORF1ab/nsp4371P371SCctTct215215B.1.20.001893
ORF1ab/nsp4371P371SCctTct135135B.1.1.70.000121
ORF1ab/nsp4371P371SCctTct102102AY.40.000159
ORF1ab/nsp4371P371SCctTct9090B.1.617.20.000339
ORF1ab/nsp4371P371SCctTct7474AY.440.00045
ORF1ab/nsp4371P371SCctTct5454AY.1030.000335
ORF1ab/nsp4371P371SCctTct4141AY.30.000408
ORF1ab/nsp4371P371SCctTct4040AY.1020.001061
ORF1ab/nsp4371P371SCctTct3434B.1.1600.00106
ORF1ab/nsp4371P371SCctTct3030B.1.1.5190.001191
ORF1ab/nsp4371P371SCctTct2828AY.950.021309
ORF1ab/nsp4371P371SCctTct2525B.1.10.000454
ORF1ab/nsp4371P371SCctTct2323AY.430.000102
ORF1ab/nsp4371P371SCctTct2121B.1.1770.000277
ORF1ab/nsp4371P371SCctTct1919AY.390.00047
ORF1ab/nsp4371P371SCctTct1919AY.980.001501
ORF1ab/nsp4371P371SCctTct1818AY.290.000284
ORF1ab/nsp4371P371SCctTct1818B.1.2340.002375
ORF1ab/nsp4371P371SCctTct1515AY.4.20.000325
ORF1ab/nsp4371P371SCctTct1314AY.50.000268
ORF1ab/nsp4371P371SCctTct1212B.10.00011
ORF1ab/nsp4371P371SCctTct1212B.1.2430.000835
ORF1ab/nsp4371P371SCctTct1212B.1.3460.015727
ORF1ab/nsp4371P371SCctTct1111AY.1190.000388
ORF1ab/nsp4371P371SCctTct1111AY.260.000311
ORF1ab/nsp4371P371SCctTct1010AY.1200.000372
ORF1ab/nsp4371P371SCctTct1010AY.460.001041
ORF1ab/nsp4371P371SCctTct1010P.10.000158
ORF1ab/nsp4371P371SCctTct88AY.420.000322
ORF1ab/nsp4371P371SCctTct77AY.1000.000322
ORF1ab/nsp4371P371SCctTct66AY.330.000401
ORF1ab/nsp4371P371SCctTct66AY.98.10.000291
ORF1ab/nsp4371P371SCctTct55AY.750.00028
ORF1ab/nsp4371P371SCctTct44AY.10.001583
ORF1ab/nsp4371P371SCctTct44AY.200.000155
ORF1ab/nsp4371P371SCctTct44AY.700.000834
ORF1ab/nsp4371P371SCctTct44B.1.4290.000094
ORF1ab/nsp4371P371SCctTct44C.36.30.002269
ORF1ab/nsp4371P371SCctTct33AY.120.000948
ORF1ab/nsp4371P371SCctTct33AY.5.40.00083
ORF1ab/nsp4371P371SCctTct33AY.60.000123
ORF1ab/nsp4371P371SCctTct33AY.90.000203
ORF1ab/nsp4371P371SCctTct33B.1.438.10.000322
ORF1ab/nsp4371P371SCctTct22AY.1100.000225
ORF1ab/nsp4371P371SCctTct22AY.1170.000169
ORF1ab/nsp4371P371SCctTct22AY.1210.000271
ORF1ab/nsp4371P371SCctTct22AY.470.000062
ORF1ab/nsp4371P371SCctTct22AY.610.00021
ORF1ab/nsp4371P371SCctTct22AY.75.10.000361
ORF1ab/nsp4371P371SCctTct22AY.850.000854
ORF1ab/nsp4371P371SCctTct22AY.99.20.000184
ORF1ab/nsp4371P371SCctTct22B.1.1.1180.020408
ORF1ab/nsp4371P371SCctTct22B.1.1.4200.002012
ORF1ab/nsp4371P371SCctTct22B.1.2580.000133
ORF1ab/nsp4371P371SCctTct22B.1.360.000292
ORF1ab/nsp4371P371SCctTct22B.1.3690.00057
ORF1ab/nsp4371P371SCctTct22B.1.4270.000101
ORF1ab/nsp4371P371SCctTct22B.1.5510.002581
ORF1ab/nsp4371P371SCctTct22B.1.5950.000522
ORF1ab/nsp4371P371SCctTct22B.1.617.10.000258
ORF1ab/nsp4371P371SCctTct22C.370.000232
ORF1ab/nsp4371P371SCctTct22C.380.016129
ORF1ab/nsp4371P371SCctTct22P.70.008734
ORF1ab/nsp4371P371SCctTct22Q.40.00091
ORF1ab/nsp4371P371SCctTct110.055556
ORF1ab/nsp4371P371SCctTct11A.20.000662
ORF1ab/nsp4371P371SCctTct11A.240.071429
ORF1ab/nsp4371P371SCctTct11A.50.001923
ORF1ab/nsp4371P371SCctTct11AY.1060.000335
ORF1ab/nsp4371P371SCctTct11AY.1160.000287
ORF1ab/nsp4371P371SCctTct11AY.116.10.000311
ORF1ab/nsp4371P371SCctTct11AY.120.10.000321
ORF1ab/nsp4371P371SCctTct11AY.20.000356
ORF1ab/nsp4371P371SCctTct11AY.29.10.000221
ORF1ab/nsp4371P371SCctTct11AY.340.000097
ORF1ab/nsp4371P371SCctTct11AY.39.10.00004
ORF1ab/nsp4371P371SCctTct11AY.4.2.10.000149
ORF1ab/nsp4371P371SCctTct11AY.4.50.000107
ORF1ab/nsp4371P371SCctTct11AY.46.60.000072
ORF1ab/nsp4371P371SCctTct11AY.550.000917
ORF1ab/nsp4371P371SCctTct11AY.600.000938
ORF1ab/nsp4371P371SCctTct11AY.70.000196
ORF1ab/nsp4371P371SCctTct11AY.7.10.000113
ORF1ab/nsp4371P371SCctTct11AY.710.000475
ORF1ab/nsp4371P371SCctTct11AY.740.000116
ORF1ab/nsp4371P371SCctTct11AY.800.001129
ORF1ab/nsp4371P371SCctTct11B.1.1.2220.000204
ORF1ab/nsp4371P371SCctTct11B.1.1.3060.000438
ORF1ab/nsp4371P371SCctTct11B.1.1.3110.000358
ORF1ab/nsp4371P371SCctTct11B.1.1.330.000421
ORF1ab/nsp4371P371SCctTct11B.1.1.3720.000689
ORF1ab/nsp4371P371SCctTct11B.1.1.390.00051
ORF1ab/nsp4371P371SCctTct11B.1.1.3980.003226
ORF1ab/nsp4371P371SCctTct11B.1.1.4340.000349
ORF1ab/nsp4371P371SCctTct11B.1.1.700.000341
ORF1ab/nsp4371P371SCctTct11B.1.1110.001175
ORF1ab/nsp4371P371SCctTct11B.1.177.120.000152
ORF1ab/nsp4371P371SCctTct11B.1.177.40.000211
ORF1ab/nsp4371P371SCctTct11B.1.177.570.000281
ORF1ab/nsp4371P371SCctTct11B.1.177.70.000165
ORF1ab/nsp4371P371SCctTct11B.1.177.730.000566
ORF1ab/nsp4371P371SCctTct11B.1.177.800.001912
ORF1ab/nsp4371P371SCctTct11B.1.177.820.000477
ORF1ab/nsp4371P371SCctTct11B.1.1800.05
ORF1ab/nsp4371P371SCctTct11B.1.2390.001221
ORF1ab/nsp4371P371SCctTct11B.1.2400.000216
ORF1ab/nsp4371P371SCctTct11B.1.258.140.00098
ORF1ab/nsp4371P371SCctTct11B.1.3110.000275
ORF1ab/nsp4371P371SCctTct11B.1.36.180.00042
ORF1ab/nsp4371P371SCctTct11B.1.36.360.000602
ORF1ab/nsp4371P371SCctTct11B.1.4800.002488
ORF1ab/nsp4371P371SCctTct11B.1.5230.002451
ORF1ab/nsp4371P371SCctTct11B.1.5260.000024
ORF1ab/nsp4371P371SCctTct11B.1.5960.000087
ORF1ab/nsp4371P371SCctTct11B.1.6200.000946
ORF1ab/nsp4371P371SCctTct11B.1.6280.000352
ORF1ab/nsp4371P371SCctTct11B.1.6370.000073
ORF1ab/nsp4371P371SCctTct11B.1.910.002075
ORF1ab/nsp4371P371SCctTct11B.400.000364
ORF1ab/nsp4371P371SCctTct11P.1.100.000269
ORF1ab/nsp4371P371SCctTct11P.1.140.000048
ORF1ab/nsp4371P371SCctTct11P.1.70.000319