CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp4 | 369 | F369F | F3132F | syn | ttC | ttT | 3848 | 3848 | 1 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369del | F3132del | del | TTC | --- | 157 | 157 | 1 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369L | F3132L | nonsyn | Ttc | Ctc | 39 | 17 | 0.435897 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369L | F3132L | nonsyn | ttC | ttA | 39 | 16 | 0.410256 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369L | F3132L | nonsyn | TtC | CtT | 39 | 4 | 0.102564 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369L | F3132L | nonsyn | ttC | ttG | 39 | 1 | 0.025641 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369L | F3132L | nonsyn | TtC | CtG | 39 | 1 | 0.025641 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369S | F3132S | nonsyn | tTc | tCc | 31 | 29 | 0.935484 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369S | F3132S | nonsyn | TTc | AGc | 31 | 1 | 0.0322581 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369S | F3132S | nonsyn | tTC | tCG | 31 | 1 | 0.0322581 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369Y | F3132Y | nonsyn | tTc | tAc | 22 | 22 | 1 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369I | F3132I | nonsyn | Ttc | Atc | 10 | 9 | 0.9 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369I | F3132I | nonsyn | TtC | AtT | 10 | 1 | 0.1 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369del1 | F3132del1 | del | ttC | tt- | 6 | 4 | 0.666667 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369del1 | F3132del1 | del | Ttc | -tc | 6 | 2 | 0.333333 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369T | F3132T | nonsyn | TTc | ACc | 3 | 3 | 1 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369N | F3132N | nonsyn | TTc | AAc | 3 | 3 | 1 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369C | F3132C | nonsyn | tTc | tGc | 3 | 3 | 1 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369V | F3132V | nonsyn | Ttc | Gtc | 2 | 2 | 1 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369D | F3132D | nonsyn | TTC | GAT | 2 | 2 | 1 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369E | F3132E | nonsyn | TTC | GAA | 1 | 1 | 1 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369W | F3132W | nonsyn | tTC | tGG | 1 | 1 | 1 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369R | F3132R | nonsyn | TTc | CGc | 1 | 1 | 1 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369H | F3132H | nonsyn | TTc | CAc | 1 | 1 | 1 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369M | F3132M | nonsyn | TtC | AtG | 1 | 1 | 1 | 9659-9661 |
ORF1ab/nsp4 | 369 | F369del2 | F3132del2 | del | TTc | --c | 1 | 1 | 1 | 9659-9661 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 3848 | 3848 | All | 0.000736 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 463 | 463 | AY.98.1 | 0.022423 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 455 | 455 | B.1.1.7 | 0.000407 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 345 | 345 | P.1 | 0.005435 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 246 | 246 | AY.4 | 0.000383 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 243 | 243 | B.1.2 | 0.00214 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 220 | 220 | B.1.349 | 0.157255 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 217 | 217 | B.1.617.2 | 0.000817 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 202 | 202 | B.1.160.15 | 1 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 157 | 157 | All | 0.00003 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 140 | 140 | B.1.1.519 | 0.00556 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 96 | 96 | B.1.240 | 0.020694 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 89 | 89 | AY.3 | 0.000885 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 87 | 87 | AY.43 | 0.000385 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 74 | 74 | AY.26 | 0.002095 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 73 | 73 | B.1.1.7 | 0.000065 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 70 | 70 | B.1 | 0.000641 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 54 | 54 | AY.103 | 0.000335 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 54 | 54 | B.1.1.207 | 0.06383 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 44 | 44 | B.1.177 | 0.000579 |
ORF1ab/nsp4 | 369 | F369L | Ttc | Ctc | 17 | 39 | All | 0.000003 |
ORF1ab/nsp4 | 369 | F369L | ttC | ttA | 16 | 39 | All | 0.000003 |
ORF1ab/nsp4 | 369 | F369L | TtC | CtT | 4 | 39 | All | 0.000001 |
ORF1ab/nsp4 | 369 | F369L | ttC | ttG | 1 | 39 | All | 0 |
ORF1ab/nsp4 | 369 | F369L | TtC | CtG | 1 | 39 | All | 0 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 38 | 38 | AY.44 | 0.000231 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 37 | 37 | B.1.1.306 | 0.016221 |
ORF1ab/nsp4 | 369 | F369S | tTc | tCc | 29 | 31 | All | 0.000006 |
ORF1ab/nsp4 | 369 | F369S | tTC | tCG | 1 | 31 | All | 0 |
ORF1ab/nsp4 | 369 | F369S | TTc | AGc | 1 | 31 | All | 0 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 25 | 25 | AY.75 | 0.001401 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 24 | 24 | B.1.1 | 0.000435 |
ORF1ab/nsp4 | 369 | F369Y | tTc | tAc | 22 | 22 | All | 0.000004 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 17 | 17 | AY.20 | 0.000661 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 17 | 17 | B.1.637 | 0.001242 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 16 | 16 | AY.120 | 0.000595 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 15 | 15 | B.1.177 | 0.000198 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 14 | 14 | AY.25 | 0.000084 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 13 | 13 | AY.102 | 0.000345 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 13 | 13 | AY.118 | 0.000814 |
ORF1ab/nsp4 | 369 | F369Y | tTc | tAc | 13 | 13 | B.1.1.7 | 0.000012 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 13 | 13 | B.1.429 | 0.000306 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 12 | 12 | AY.29 | 0.000189 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 12 | 12 | AY.33 | 0.000801 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 12 | 12 | B.1.617.1 | 0.001548 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 12 | 12 | D.2 | 0.0009 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 11 | 11 | B.1.177.86 | 0.002018 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 11 | 11 | B.1.351 | 0.000327 |
ORF1ab/nsp4 | 369 | F369I | Ttc | Atc | 9 | 10 | All | 0.000002 |
ORF1ab/nsp4 | 369 | F369I | TtC | AtT | 1 | 10 | All | 0 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 10 | 10 | B.1.427 | 0.000505 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 10 | 10 | B.1.537 | 0.2 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 10 | 10 | Q.1 | 0.001263 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 9 | 9 | AY.5 | 0.000186 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 9 | 9 | B.1.243 | 0.000626 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 9 | 9 | B.1.526 | 0.000212 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 8 | 8 | A.1 | 0.002255 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 8 | 8 | AY.69 | 0.001493 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 7 | 7 | AY.119 | 0.000247 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 7 | 7 | AY.3.1 | 0.000597 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 7 | 7 | AY.4 | 0.000011 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 7 | 7 | AY.4.2.1 | 0.001043 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 7 | 7 | AY.4.5 | 0.000752 |
ORF1ab/nsp4 | 369 | F369L | Ttc | Ctc | 6 | 7 | AY.44 | 0.000037 |
ORF1ab/nsp4 | 369 | F369L | ttC | ttA | 1 | 7 | AY.44 | 0.000006 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 7 | 7 | AY.9.2 | 0.000257 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 7 | 7 | B.1.1.326 | 0.012324 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 7 | 7 | B.1.177.83 | 0.01037 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 7 | 7 | P.1.12 | 0.003388 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 7 | 7 | P.1.7 | 0.002235 |
ORF1ab/nsp4 | 369 | F369del1 | ttC | tt- | 4 | 6 | All | 0.000001 |
ORF1ab/nsp4 | 369 | F369del1 | Ttc | -tc | 2 | 6 | All | 0 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 6 | 6 | AY.46.5 | 0.00119 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 6 | 6 | AY.54 | 0.000572 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 6 | 6 | AY.94 | 0.002656 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 6 | 6 | B.1.1.432 | 0.007595 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 6 | 6 | B.1.361 | 0.007732 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 6 | 6 | B.1.561 | 0.002382 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 5 | 5 | AY.15 | 0.011111 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 5 | 5 | B.1.1.229 | 0.028736 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 5 | 5 | B.1.177.81 | 0.000947 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 5 | 5 | B.1.221.3 | 0.004167 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 5 | 5 | B.1.36 | 0.00073 |
ORF1ab/nsp4 | 369 | F369S | tTc | tCc | 5 | 5 | B.1.617.2 | 0.000019 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 5 | 5 | P.1.15 | 0.001162 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 5 | 5 | Q.4 | 0.002274 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 4 | 4 | AY.39 | 0.000099 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 4 | 4 | AY.4.2 | 0.000087 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 4 | 4 | AY.43 | 0.000018 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 4 | 4 | AY.50 | 0.003197 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 4 | 4 | AY.61 | 0.000419 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 4 | 4 | AY.9 | 0.00027 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 4 | 4 | B.1.1.523 | 0.00625 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 4 | 4 | B.1.221 | 0.000284 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 4 | 4 | B.1.258 | 0.000266 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 4 | 4 | B.1.346 | 0.005242 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 4 | 4 | B.1.538 | 0.032258 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 4 | 4 | B.1.617.2 | 0.000015 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 4 | 4 | B.40 | 0.001457 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 4 | 4 | C.37 | 0.000464 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 4 | 4 | P.2 | 0.000747 |
ORF1ab/nsp4 | 369 | F369T | TTc | ACc | 3 | 3 | All | 0.000001 |
ORF1ab/nsp4 | 369 | F369C | tTc | tGc | 3 | 3 | All | 0.000001 |
ORF1ab/nsp4 | 369 | F369N | TTc | AAc | 3 | 3 | All | 0.000001 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 3 | 3 | AY.111 | 0.000549 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 3 | 3 | AY.114 | 0.000693 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 3 | 3 | AY.14 | 0.000264 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 3 | 3 | AY.4.4 | 0.001227 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 3 | 3 | AY.45 | 0.000365 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 3 | 3 | AY.99 | 0.003148 |
ORF1ab/nsp4 | 369 | F369L | ttC | ttA | 2 | 3 | B.1 | 0.000018 |
ORF1ab/nsp4 | 369 | F369L | Ttc | Ctc | 1 | 3 | B.1 | 0.000009 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 3 | 3 | B.1.1.214 | 0.000166 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 3 | 3 | B.1.1.526 | 0.010638 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 3 | 3 | B.1.160 | 0.000094 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 3 | 3 | B.1.177.43 | 0.004431 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 3 | 3 | B.1.177.87 | 0.002183 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 3 | 3 | B.1.239 | 0.003663 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 3 | 3 | B.1.258.17 | 0.000312 |
ORF1ab/nsp4 | 369 | F369I | Ttc | Atc | 3 | 3 | B.1.398 | 0.008929 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 3 | 3 | B.1.466.2 | 0.001174 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 3 | 3 | B.1.596 | 0.000261 |
ORF1ab/nsp4 | 369 | F369L | Ttc | Ctc | 2 | 3 | B.1.617.2 | 0.000008 |
ORF1ab/nsp4 | 369 | F369L | TtC | CtT | 1 | 3 | B.1.617.2 | 0.000004 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 3 | 3 | P.1.14 | 0.000143 |
ORF1ab/nsp4 | 369 | F369N | TTc | AAc | 2 | 2 | 0.111111 | |
ORF1ab/nsp4 | 369 | F369I | Ttc | Atc | 2 | 2 | 0.111111 | |
ORF1ab/nsp4 | 369 | F369L | TtC | CtT | 2 | 2 | 0.111111 | |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | A | 0.000774 |
ORF1ab/nsp4 | 369 | F369D | TTC | GAT | 2 | 2 | All | 0 |
ORF1ab/nsp4 | 369 | F369V | Ttc | Gtc | 2 | 2 | All | 0 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | AY.100 | 0.000092 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 2 | 2 | AY.100 | 0.000092 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | AY.116 | 0.000574 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | AY.116.1 | 0.000623 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | AY.23 | 0.000139 |
ORF1ab/nsp4 | 369 | F369S | tTc | tCc | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp4 | 369 | F369L | Ttc | Ctc | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | AY.39.1 | 0.000079 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | AY.40 | 0.001929 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | AY.42 | 0.00008 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | AY.46.2 | 0.001271 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | AY.46.6 | 0.000144 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | AY.57 | 0.001312 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | AY.71 | 0.00095 |
ORF1ab/nsp4 | 369 | F369S | tTc | tCc | 2 | 2 | AY.74 | 0.000231 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | AY.75.1 | 0.000361 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | AY.78 | 0.003082 |
ORF1ab/nsp4 | 369 | F369Y | tTc | tAc | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp4 | 369 | F369S | tTc | tCc | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp4 | 369 | F369L | ttC | ttA | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | B.1.1.166 | 0.066667 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | B.1.1.170 | 0.002494 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | B.1.1.25 | 0.001137 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | B.1.1.28 | 0.000622 |
ORF1ab/nsp4 | 369 | F369Y | tTc | tAc | 2 | 2 | B.1.1.284 | 0.000215 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | B.1.1.311 | 0.000716 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | B.1.1.317 | 0.000823 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | B.1.1.318 | 0.000604 |
ORF1ab/nsp4 | 369 | F369S | tTc | tCc | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp4 | 369 | F369del1 | ttC | tt- | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp4 | 369 | F369del1 | Ttc | -tc | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp4 | 369 | F369L | ttC | ttA | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp4 | 369 | F369L | Ttc | Ctc | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | B.1.111 | 0.00235 |
ORF1ab/nsp4 | 369 | F369C | tTc | tGc | 2 | 2 | B.1.177 | 0.000026 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | B.1.177.16 | 0.001329 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | B.1.177.60 | 0.000437 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 2 | 2 | B.1.177.69 | 0.002967 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | B.1.177.7 | 0.00033 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp4 | 369 | F369S | tTc | tCc | 2 | 2 | B.1.258.17 | 0.000208 |
ORF1ab/nsp4 | 369 | F369I | TtC | AtT | 1 | 2 | B.1.308 | 0.034483 |
ORF1ab/nsp4 | 369 | F369I | Ttc | Atc | 1 | 2 | B.1.308 | 0.034483 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | B.1.36.17 | 0.000988 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | B.1.621 | 0.000177 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | B.1.628 | 0.000705 |
ORF1ab/nsp4 | 369 | F369L | ttC | ttA | 1 | 2 | B.6 | 0.00091 |
ORF1ab/nsp4 | 369 | F369L | TtC | CtT | 1 | 2 | B.6 | 0.00091 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 2 | 2 | C.16 | 0.002121 |
ORF1ab/nsp4 | 369 | F369L | ttC | ttA | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | 0.055556 | |
ORF1ab/nsp4 | 369 | F369S | tTc | tCc | 1 | 1 | A | 0.000387 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | A | 0.000387 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp4 | 369 | F369Y | tTc | tAc | 1 | 1 | A.24 | 0.071429 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp4 | 369 | F369W | tTC | tGG | 1 | 1 | All | 0 |
ORF1ab/nsp4 | 369 | F369E | TTC | GAA | 1 | 1 | All | 0 |
ORF1ab/nsp4 | 369 | F369R | TTc | CGc | 1 | 1 | All | 0 |
ORF1ab/nsp4 | 369 | F369M | TtC | AtG | 1 | 1 | All | 0 |
ORF1ab/nsp4 | 369 | F369H | TTc | CAc | 1 | 1 | All | 0 |
ORF1ab/nsp4 | 369 | F369del2 | TTc | --c | 1 | 1 | All | 0 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp4 | 369 | F369S | tTc | tCc | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp4 | 369 | F369S | TTc | AGc | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp4 | 369 | F369N | TTc | AAc | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.12 | 0.000316 |
ORF1ab/nsp4 | 369 | F369Y | tTc | tAc | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.2 | 0.000356 |
ORF1ab/nsp4 | 369 | F369Y | tTc | tAc | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp4 | 369 | F369S | tTc | tCc | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp4 | 369 | F369M | TtC | AtG | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp4 | 369 | F369D | TTC | GAT | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp4 | 369 | F369V | Ttc | Gtc | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp4 | 369 | F369S | tTc | tCc | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp4 | 369 | F369del1 | ttC | tt- | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp4 | 369 | F369T | TTc | ACc | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.46.3 | 0.000934 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp4 | 369 | F369W | tTC | tGG | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp4 | 369 | F369S | tTc | tCc | 1 | 1 | AY.5.2 | 0.002463 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp4 | 369 | F369L | ttC | ttA | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp4 | 369 | F369del1 | Ttc | -tc | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp4 | 369 | F369S | tTc | tCc | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.66 | 0.00107 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.74 | 0.000116 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.90 | 0.000684 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.93 | 0.000273 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp4 | 369 | F369S | tTC | tCG | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | AY.99.1 | 0.001553 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | AZ.1 | 0.000867 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | B | 0.000128 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp4 | 369 | F369S | tTc | tCc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp4 | 369 | F369I | Ttc | Atc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp4 | 369 | F369del1 | ttC | tt- | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp4 | 369 | F369H | TTc | CAc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp4 | 369 | F369I | Ttc | Atc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp4 | 369 | F369Y | tTc | tAc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp4 | 369 | F369R | TTc | CGc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp4 | 369 | F369C | tTc | tGc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | B.1.1.139 | 0.022727 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.1.161 | 0.003534 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.1.163 | 0.007634 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.1.198 | 0.001468 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp4 | 369 | F369L | ttC | ttA | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | B.1.1.232 | 0.001815 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | B.1.1.236 | 0.006897 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.1.239 | 0.032258 |
ORF1ab/nsp4 | 369 | F369S | tTc | tCc | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.1.291 | 0.000742 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.1.333 | 0.001076 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.1.351 | 0.002793 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.1.375 | 0.011905 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp4 | 369 | F369L | Ttc | Ctc | 1 | 1 | B.1.1.432 | 0.001266 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.1.433 | 0.001425 |
ORF1ab/nsp4 | 369 | F369S | tTc | tCc | 1 | 1 | B.1.1.463 | 0.0625 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.1.464 | 0.001473 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.1.50 | 0.000679 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.1.507 | 0.008696 |
ORF1ab/nsp4 | 369 | F369del2 | TTc | --c | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp4 | 369 | F369V | Ttc | Gtc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp4 | 369 | F369L | ttC | ttA | 1 | 1 | B.1.157 | 0.002985 |
ORF1ab/nsp4 | 369 | F369L | ttC | ttA | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp4 | 369 | F369S | tTc | tCc | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | B.1.160.7 | 0.002079 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | B.1.177.11 | 0.001698 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.177.12 | 0.000152 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | B.1.177.17 | 0.000821 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | B.1.177.18 | 0.00116 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.177.3 | 0.007634 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | B.1.177.55 | 0.002331 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.177.55 | 0.002331 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.177.69 | 0.001484 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | B.1.177.76 | 0.002494 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.195 | 0.005025 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp4 | 369 | F369L | Ttc | Ctc | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | B.1.23 | 0.006061 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp4 | 369 | F369L | Ttc | Ctc | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.241 | 0.000812 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.258.11 | 0.000396 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | B.1.258.16 | 0.001637 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.258.5 | 0.008772 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.308 | 0.034483 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp4 | 369 | F369S | tTc | tCc | 1 | 1 | B.1.336 | 0.002439 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.336 | 0.002439 |
ORF1ab/nsp4 | 369 | F369L | ttC | ttA | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.356 | 0.001727 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.36.21 | 0.00216 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp4 | 369 | F369L | Ttc | Ctc | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.371 | 0.001122 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.399 | 0.001934 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.424 | 0.008065 |
ORF1ab/nsp4 | 369 | F369S | tTc | tCc | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp4 | 369 | F369L | Ttc | Ctc | 1 | 1 | B.1.442 | 0.035714 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.469 | 0.00361 |
ORF1ab/nsp4 | 369 | F369T | TTc | ACc | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp4 | 369 | F369L | ttC | ttG | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp4 | 369 | F369S | tTc | tCc | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.547 | 0.02439 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.565 | 0.00081 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp4 | 369 | F369E | TTC | GAA | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp4 | 369 | F369I | Ttc | Atc | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp4 | 369 | F369D | TTC | GAT | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp4 | 369 | F369del1 | ttC | tt- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp4 | 369 | F369T | TTc | ACc | 1 | 1 | B.1.617.3 | 0.002985 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp4 | 369 | F369L | ttC | ttA | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp4 | 369 | F369L | TtC | CtG | 1 | 1 | B.1.633 | 0.041667 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.634 | 0.003425 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.636 | 0.006711 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.1.93 | 0.000934 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | B.4.5 | 0.011905 |
ORF1ab/nsp4 | 369 | F369L | ttC | ttA | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp4 | 369 | F369Y | tTc | tAc | 1 | 1 | C.36.2 | 0.034483 |
ORF1ab/nsp4 | 369 | F369S | tTc | tCc | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp4 | 369 | F369F | ttC | ttT | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp4 | 369 | F369del | TTC | --- | 1 | 1 | U.3 | 0.003861 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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