CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 354 & Codon = Gct

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4354T354AT3117AnonsynActGct343234300.9994179614-9616

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4354T354AActGct34303432All0.000656
ORF1ab/nsp4354T354AActGct28062806B.1.6280.988724
ORF1ab/nsp4354T354AActGct286286B.1.6340.979452
ORF1ab/nsp4354T354AActGct9898B.10.000898
ORF1ab/nsp4354T354AActGct8787B.1.1.70.000078
ORF1ab/nsp4354T354AActGct3738AY.430.000164
ORF1ab/nsp4354T354AActGct1515AY.250.00009
ORF1ab/nsp4354T354AActGct1010P.1.120.00484
ORF1ab/nsp4354T354AActGct78AY.440.000043
ORF1ab/nsp4354T354AActGct88B.1.5580.03653
ORF1ab/nsp4354T354AActGct77AY.40.000011
ORF1ab/nsp4354T354AActGct77B.1.1.2040.021277
ORF1ab/nsp4354T354AActGct77B.1.617.20.000026
ORF1ab/nsp4354T354AActGct55B.1.20.000044
ORF1ab/nsp4354T354AActGct44B.1.10.000073
ORF1ab/nsp4354T354AActGct44B.1.6270.008081
ORF1ab/nsp4354T354AActGct33B.1.1080.017442
ORF1ab/nsp4354T354AActGct33B.1.1770.00004
ORF1ab/nsp4354T354AActGct33B.1.5260.000071
ORF1ab/nsp4354T354AActGct22A0.000774
ORF1ab/nsp4354T354AActGct22AY.1020.000053
ORF1ab/nsp4354T354AActGct22B.1.177.730.001133
ORF1ab/nsp4354T354AActGct22B.1.5960.000174
ORF1ab/nsp4354T354AActGct22P.10.000032
ORF1ab/nsp4354T354AActGct11A.270.001656
ORF1ab/nsp4354T354AActGct11AY.1030.000006
ORF1ab/nsp4354T354AActGct11AY.290.000016
ORF1ab/nsp4354T354AActGct11AY.390.000025
ORF1ab/nsp4354T354AActGct11AY.39.20.001541
ORF1ab/nsp4354T354AActGct11AY.420.00004
ORF1ab/nsp4354T354AActGct11AY.50.000021
ORF1ab/nsp4354T354AActGct11B.1.1.1170.009709
ORF1ab/nsp4354T354AActGct11B.1.1.2200.001859
ORF1ab/nsp4354T354AActGct11B.1.1.330.000421
ORF1ab/nsp4354T354AActGct11B.1.1.4130.006897
ORF1ab/nsp4354T354AActGct11B.1.1.4290.004608
ORF1ab/nsp4354T354AActGct11B.1.1280.000635
ORF1ab/nsp4354T354AActGct11B.1.2210.000071
ORF1ab/nsp4354T354AActGct11B.1.2320.000537
ORF1ab/nsp4354T354AActGct11B.1.2430.00007
ORF1ab/nsp4354T354AActGct11B.1.2470.014925
ORF1ab/nsp4354T354AActGct11B.1.3750.00082
ORF1ab/nsp4354T354AActGct11B.1.6190.000871
ORF1ab/nsp4354T354AActGct11B.1.6210.000089
ORF1ab/nsp4354T354AActGct11C.370.000116
ORF1ab/nsp4354T354AActGct11P.20.000187
ORF1ab/nsp4354T354AActGct11Q.30.000145