CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 325 & Codon = Cca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4325S325PS3088PnonsynTcaCca8819527-9529

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4325S325PTcaCca88All0.000002
ORF1ab/nsp4325S325PTcaCca11AY.260.000028
ORF1ab/nsp4325S325PTcaCca11AY.40.000002
ORF1ab/nsp4325S325PTcaCca11AY.440.000006
ORF1ab/nsp4325S325PTcaCca11B.1.1.390.00051
ORF1ab/nsp4325S325PTcaCca11B.1.1.5190.00004
ORF1ab/nsp4325S325PTcaCca11B.1.20.000009
ORF1ab/nsp4325S325PTcaCca11B.1.617.20.000004
ORF1ab/nsp4325S325PTcaCca11B.570.015152