CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 311 & Codon = tGc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4311Y311CY3074CnonsyntActGc89880.9887649485-9487

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4311Y311CtActGc8889All0.000017
ORF1ab/nsp4311Y311CtActGc2626AY.40.00004
ORF1ab/nsp4311Y311CtActGc1010B.1.4290.000235
ORF1ab/nsp4311Y311CtActGc66AY.1030.000037
ORF1ab/nsp4311Y311CtActGc55AY.1020.000133
ORF1ab/nsp4311Y311CtActGc55B.1.20.000044
ORF1ab/nsp4311Y311CtActGc44AY.440.000024
ORF1ab/nsp4311Y311CtActGc33AY.30.00003
ORF1ab/nsp4311Y311CtActGc23B.1.1.70.000002
ORF1ab/nsp4311Y311CtActGc33B.1.617.20.000011
ORF1ab/nsp4311Y311CtActGc22AY.1100.000225
ORF1ab/nsp4311Y311CtActGc22AY.120.10.000642
ORF1ab/nsp4311Y311CtActGc22AY.430.000009
ORF1ab/nsp4311Y311CtActGc11AY.1000.000046
ORF1ab/nsp4311Y311CtActGc11AY.1170.000085
ORF1ab/nsp4311Y311CtActGc11AY.200.000039
ORF1ab/nsp4311Y311CtActGc11AY.230.00007
ORF1ab/nsp4311Y311CtActGc11AY.250.000006
ORF1ab/nsp4311Y311CtActGc11AY.290.000016
ORF1ab/nsp4311Y311CtActGc11AY.4.20.000022
ORF1ab/nsp4311Y311CtActGc11AY.4.30.000842
ORF1ab/nsp4311Y311CtActGc11AY.400.000964
ORF1ab/nsp4311Y311CtActGc11AY.690.000187
ORF1ab/nsp4311Y311CtActGc11B.10.000009
ORF1ab/nsp4311Y311CtActGc11B.1.10.000018
ORF1ab/nsp4311Y311CtActGc11B.1.1.1760.000439
ORF1ab/nsp4311Y311CtActGc11B.1.1.3260.001761
ORF1ab/nsp4311Y311CtActGc11B.1.1.3330.001076
ORF1ab/nsp4311Y311CtActGc11B.1.5960.000087
ORF1ab/nsp4311Y311CtActGc11B.60.00091
ORF1ab/nsp4311Y311CtActGc11C.370.000116