CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 281 & Codon = Cca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4281S281PS3044PnonsynTcaCca171719395-9397

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4281S281PTcaCca1717All0.000003
ORF1ab/nsp4281S281PTcaCca44AY.40.000006
ORF1ab/nsp4281S281PTcaCca33B.1.1.70.000003
ORF1ab/nsp4281S281PTcaCca22AY.30.00002
ORF1ab/nsp4281S281PTcaCca11AY.440.000006
ORF1ab/nsp4281S281PTcaCca11AY.46.10.001027
ORF1ab/nsp4281S281PTcaCca11AY.980.000079
ORF1ab/nsp4281S281PTcaCca11B.10.000009
ORF1ab/nsp4281S281PTcaCca11B.1.160.140.002119
ORF1ab/nsp4281S281PTcaCca11B.1.2340.000132
ORF1ab/nsp4281S281PTcaCca11B.1.3260.007576
ORF1ab/nsp4281S281PTcaCca11B.1.5600.00463