CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 27 & Codon = Cta

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp427I27LI2790LnonsynAtaCta2422310.9545458633-8635

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp427I27LAtaCta231242All0.000044
ORF1ab/nsp427I27LAtaCta196196AY.40.000305
ORF1ab/nsp427I27LAtaCta99B.1.5260.000212
ORF1ab/nsp427I27LAtaCta66B.1.617.20.000023
ORF1ab/nsp427I27LAtaCta250.111111
ORF1ab/nsp427I27LAtaCta34B.1.1.70.000003
ORF1ab/nsp427I27LAtaCta22AY.430.000009
ORF1ab/nsp427I27LAtaCta22AY.440.000012
ORF1ab/nsp427I27LAtaCta22P.10.000032
ORF1ab/nsp427I27LAtaCta11AY.1020.000027
ORF1ab/nsp427I27LAtaCta11AY.1030.000006
ORF1ab/nsp427I27LAtaCta11AY.116.10.000311
ORF1ab/nsp427I27LAtaCta11AY.330.000067
ORF1ab/nsp427I27LAtaCta11AY.390.000025
ORF1ab/nsp427I27LAtaCta11AY.420.00004
ORF1ab/nsp427I27LAtaCta11AY.550.000917
ORF1ab/nsp427I27LAtaCta11AY.9.20.000037
ORF1ab/nsp427I27LAtaCta11B.1.466.20.000391