CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 255

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4255F255FF3018FsynttCttT103501035019317-9319
ORF1ab/nsp4255F255LF3018LnonsynttCttA90480.5333339317-9319
ORF1ab/nsp4255F255LF3018LnonsynTtcCtc90420.4666679317-9319
ORF1ab/nsp4255F255delF3018deldelTTC---767619317-9319
ORF1ab/nsp4255F255SF3018SnonsyntTctCc20190.959317-9319
ORF1ab/nsp4255F255SF3018SnonsyntTCtCT2010.059317-9319
ORF1ab/nsp4255F255del1F3018del1delttCtt-111119317-9319
ORF1ab/nsp4255F255VF3018VnonsynTtcGtc9919317-9319
ORF1ab/nsp4255F255CF3018CnonsyntTctGc4419317-9319
ORF1ab/nsp4255F255YF3018YnonsyntTctAc4419317-9319
ORF1ab/nsp4255F255IF3018InonsynTtcAtc2219317-9319

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4255F255FttCttT1035010350All0.00198
ORF1ab/nsp4255F255FttCttT24822482AY.300.982192
ORF1ab/nsp4255F255FttCttT15551555B.1.619.10.997434
ORF1ab/nsp4255F255FttCttT11091109B.1.6190.966028
ORF1ab/nsp4255F255FttCttT711711B.1.1.4320.9
ORF1ab/nsp4255F255FttCttT656656AY.40.001021
ORF1ab/nsp4255F255FttCttT501501B.1.617.20.001886
ORF1ab/nsp4255F255FttCttT475475AY.230.033131
ORF1ab/nsp4255F255FttCttT423423B.1.1.70.000379
ORF1ab/nsp4255F255FttCttT311311B.1.20.002738
ORF1ab/nsp4255F255FttCttT165165B.1.5750.050061
ORF1ab/nsp4255F255FttCttT150150AY.200.00583
ORF1ab/nsp4255F255FttCttT127127AY.4.20.002754
ORF1ab/nsp4255F255FttCttT112112AY.540.010679
ORF1ab/nsp4255F255FttCttT109109B.10.000998
ORF1ab/nsp4255F255FttCttT9393P.10.001465
ORF1ab/nsp4255F255LttCttA4890All0.000009
ORF1ab/nsp4255F255LTtcCtc4290All0.000008
ORF1ab/nsp4255F255FttCttT7777B.1.4290.001812
ORF1ab/nsp4255F255delTTC---7676All0.000015
ORF1ab/nsp4255F255FttCttT7676AY.250.000457
ORF1ab/nsp4255F255FttCttT7070AY.1030.000435
ORF1ab/nsp4255F255FttCttT6767B.1.1.2140.003716
ORF1ab/nsp4255F255FttCttT6363AY.30.000627
ORF1ab/nsp4255F255FttCttT5959AY.430.000261
ORF1ab/nsp4255F255FttCttT5252AY.330.003472
ORF1ab/nsp4255F255FttCttT5252B.1.177.580.069241
ORF1ab/nsp4255F255FttCttT5151B.1.5260.001199
ORF1ab/nsp4255F255FttCttT5151B.4.40.962264
ORF1ab/nsp4255F255FttCttT4747AY.850.020077
ORF1ab/nsp4255F255delTTC---3333B.1.1.70.00003
ORF1ab/nsp4255F255FttCttT3232B.1.1.10.010454
ORF1ab/nsp4255F255FttCttT3030B.1.10.000544
ORF1ab/nsp4255F255FttCttT2626AY.390.000642
ORF1ab/nsp4255F255FttCttT2626AY.910.018992
ORF1ab/nsp4255F255FttCttT2424AY.260.000679
ORF1ab/nsp4255F255FttCttT2222AY.440.000134
ORF1ab/nsp4255F255StTctCc1920All0.000004
ORF1ab/nsp4255F255StTCtCT120All0
ORF1ab/nsp4255F255FttCttT2020B.1.1600.000624
ORF1ab/nsp4255F255FttCttT1919AY.7.10.002141
ORF1ab/nsp4255F255FttCttT1818B.1.5960.001568
ORF1ab/nsp4255F255LTtcCtc1317B.1.1.70.000012
ORF1ab/nsp4255F255LttCttA417B.1.1.70.000004
ORF1ab/nsp4255F255FttCttT1616AY.1020.000424
ORF1ab/nsp4255F255FttCttT1616B.1.1.3970.036036
ORF1ab/nsp4255F255FttCttT1616B.1.3510.000476
ORF1ab/nsp4255F255LttCttA1616B.1.4270.000808
ORF1ab/nsp4255F255FttCttT1414AY.1010.006866
ORF1ab/nsp4255F255FttCttT1212B.1.214.20.007194
ORF1ab/nsp4255F255del1ttCtt-1111All0.000002
ORF1ab/nsp4255F255FttCttT1111AY.670.005107
ORF1ab/nsp4255F255FttCttT1111B.1.2580.000732
ORF1ab/nsp4255F255VTtcGtc99All0.000002
ORF1ab/nsp4255F255FttCttT99AY.1190.000318
ORF1ab/nsp4255F255FttCttT99B.1.1770.000119
ORF1ab/nsp4255F255LTtcCtc99B.1.20.000079
ORF1ab/nsp4255F255FttCttT99C.370.001045
ORF1ab/nsp4255F255StTctCc88AY.40.000012
ORF1ab/nsp4255F255FttCttT88AY.470.000249
ORF1ab/nsp4255F255FttCttT88B0.001022
ORF1ab/nsp4255F255FttCttT88B.1.1.4350.275862
ORF1ab/nsp4255F255FttCttT88B.1.2430.000557
ORF1ab/nsp4255F255FttCttT77AY.1000.000322
ORF1ab/nsp4255F255FttCttT77AY.420.000282
ORF1ab/nsp4255F255FttCttT77AY.450.000852
ORF1ab/nsp4255F255FttCttT77AY.620.00305
ORF1ab/nsp4255F255LTtcCtc47B.10.000037
ORF1ab/nsp4255F255LttCttA37B.10.000027
ORF1ab/nsp4255F255FttCttT66AY.1200.000223
ORF1ab/nsp4255F255delTTC---66AY.40.000009
ORF1ab/nsp4255F255FttCttT66AY.460.000624
ORF1ab/nsp4255F255LttCttA66AY.570.003937
ORF1ab/nsp4255F255FttCttT66AY.750.000336
ORF1ab/nsp4255F255FttCttT66AY.99.20.000553
ORF1ab/nsp4255F255FttCttT66B.1.1.2220.001224
ORF1ab/nsp4255F255FttCttT66B.1.1.4160.00543
ORF1ab/nsp4255F255FttCttT66B.1.1.5190.000238
ORF1ab/nsp4255F255FttCttT66B.1.177.840.04
ORF1ab/nsp4255F255FttCttT66B.1.360.000875
ORF1ab/nsp4255F255FttCttT66B.1.4000.002574
ORF1ab/nsp4255F255FttCttT66B.1.6370.000438
ORF1ab/nsp4255F255FttCttT66D.20.00045
ORF1ab/nsp4255F255delTTC---55B.1.1770.000066
ORF1ab/nsp4255F255del1ttCtt-55B.1.617.20.000019
ORF1ab/nsp4255F255FttCttT55P.20.000933
ORF1ab/nsp4255F255YtTctAc44All0.000001
ORF1ab/nsp4255F255CtTctGc44All0.000001
ORF1ab/nsp4255F255FttCttT44AY.1170.000338
ORF1ab/nsp4255F255FttCttT44AY.290.000063
ORF1ab/nsp4255F255FttCttT44AY.3.10.000341
ORF1ab/nsp4255F255FttCttT44AY.39.10.000158
ORF1ab/nsp4255F255delTTC---44AY.4.50.00043
ORF1ab/nsp4255F255FttCttT44AY.46.60.000289
ORF1ab/nsp4255F255FttCttT44AY.490.01278
ORF1ab/nsp4255F255FttCttT44AY.650.002132
ORF1ab/nsp4255F255FttCttT44AY.980.000316
ORF1ab/nsp4255F255VTtcGtc44B.1.1.390.002039
ORF1ab/nsp4255F255FttCttT44B.1.438.10.000429
ORF1ab/nsp4255F255FttCttT44B.1.4690.01444
ORF1ab/nsp4255F255LttCttA44B.1.5950.001044
ORF1ab/nsp4255F255FttCttT44P.1.140.000191
ORF1ab/nsp4255F255LttCttA33AY.1030.000019
ORF1ab/nsp4255F255FttCttT33AY.1110.000549
ORF1ab/nsp4255F255FttCttT33AY.1130.000427
ORF1ab/nsp4255F255FttCttT33AY.160.001139
ORF1ab/nsp4255F255FttCttT33AY.16.10.00141
ORF1ab/nsp4255F255FttCttT33AY.280.005671
ORF1ab/nsp4255F255FttCttT33AY.320.001597
ORF1ab/nsp4255F255LTtcCtc33AY.40.000005
ORF1ab/nsp4255F255FttCttT33AY.610.000314
ORF1ab/nsp4255F255FttCttT33AY.98.10.000145
ORF1ab/nsp4255F255FttCttT33B.1.1.1960.017143
ORF1ab/nsp4255F255FttCttT33B.1.1.2440.046154
ORF1ab/nsp4255F255FttCttT33B.1.1.500.002037
ORF1ab/nsp4255F255FttCttT33B.1.258.170.000312
ORF1ab/nsp4255F255FttCttT33B.1.258.240.032258
ORF1ab/nsp4255F255FttCttT33B.1.3240.004815
ORF1ab/nsp4255F255FttCttT33B.1.3320.01049
ORF1ab/nsp4255F255LTtcCtc33B.1.4290.000071
ORF1ab/nsp4255F255FttCttT33B.1.466.20.001174
ORF1ab/nsp4255F255FttCttT33B.1.6210.000266
ORF1ab/nsp4255F255FttCttT33B.40.006623
ORF1ab/nsp4255F255FttCttT22A.2.50.000998
ORF1ab/nsp4255F255ITtcAtc22All0
ORF1ab/nsp4255F255delTTC---22AY.1110.000366
ORF1ab/nsp4255F255VTtcGtc22AY.1140.000462
ORF1ab/nsp4255F255FttCttT22AY.1160.000574
ORF1ab/nsp4255F255FttCttT22AY.1180.000125
ORF1ab/nsp4255F255FttCttT22AY.1210.000271
ORF1ab/nsp4255F255FttCttT22AY.190.002281
ORF1ab/nsp4255F255del1ttCtt-22AY.230.000139
ORF1ab/nsp4255F255LTtcCtc22AY.250.000012
ORF1ab/nsp4255F255FttCttT22AY.360.000296
ORF1ab/nsp4255F255FttCttT22AY.46.40.000329
ORF1ab/nsp4255F255FttCttT22AY.50.000041
ORF1ab/nsp4255F255FttCttT22AY.530.000575
ORF1ab/nsp4255F255FttCttT22AY.590.001059
ORF1ab/nsp4255F255FttCttT22AY.60.000082
ORF1ab/nsp4255F255FttCttT22AY.75.10.000361
ORF1ab/nsp4255F255FttCttT22AY.9.20.000073
ORF1ab/nsp4255F255delTTC---22B.1.10.000036
ORF1ab/nsp4255F255LTtcCtc12B.1.10.000018
ORF1ab/nsp4255F255LttCttA12B.1.10.000018
ORF1ab/nsp4255F255FttCttT22B.1.1.280.000622
ORF1ab/nsp4255F255delTTC---22B.1.1.3110.000716
ORF1ab/nsp4255F255FttCttT22B.1.1.330.000842
ORF1ab/nsp4255F255FttCttT22B.1.1.3720.001377
ORF1ab/nsp4255F255FttCttT22B.1.1.4340.000697
ORF1ab/nsp4255F255FttCttT22B.1.2210.000142
ORF1ab/nsp4255F255FttCttT22B.1.2320.001075
ORF1ab/nsp4255F255LTtcCtc22B.1.2430.000139
ORF1ab/nsp4255F255FttCttT22B.1.36.290.001035
ORF1ab/nsp4255F255FttCttT22B.1.36.80.002
ORF1ab/nsp4255F255FttCttT22B.1.3620.003082
ORF1ab/nsp4255F255FttCttT22B.1.5610.000794
ORF1ab/nsp4255F255LTtcCtc22B.1.5960.000174
ORF1ab/nsp4255F255FttCttT22B.1.6090.000959
ORF1ab/nsp4255F255delTTC---22B.1.617.20.000008
ORF1ab/nsp4255F255YtTctAc22B.1.617.20.000008
ORF1ab/nsp4255F255FttCttT22B.1.6280.000705
ORF1ab/nsp4255F255FttCttT22C.350.001548
ORF1ab/nsp4255F255FttCttT22C.40.02
ORF1ab/nsp4255F255StTctCc22D.20.00015
ORF1ab/nsp4255F255LttCttA22P.10.000032
ORF1ab/nsp4255F255FttCttT22P.1.120.000968
ORF1ab/nsp4255F255FttCttT22P.1.150.000465
ORF1ab/nsp4255F255FttCttT22Q.80.00033
ORF1ab/nsp4255F255LttCttA110.055556
ORF1ab/nsp4255F255LttCttA11A0.000387
ORF1ab/nsp4255F255FttCttT11AT.10.005128
ORF1ab/nsp4255F255FttCttT11AY.10.000396
ORF1ab/nsp4255F255LttCttA11AY.1020.000027
ORF1ab/nsp4255F255delTTC---11AY.1030.000006
ORF1ab/nsp4255F255FttCttT11AY.1100.000113
ORF1ab/nsp4255F255StTctCc11AY.1180.000063
ORF1ab/nsp4255F255delTTC---11AY.1200.000037
ORF1ab/nsp4255F255FttCttT11AY.120.10.000321
ORF1ab/nsp4255F255FttCttT11AY.140.000088
ORF1ab/nsp4255F255FttCttT11AY.240.000431
ORF1ab/nsp4255F255LttCttA11AY.240.000431
ORF1ab/nsp4255F255StTctCc11AY.30.00001
ORF1ab/nsp4255F255VTtcGtc11AY.330.000067
ORF1ab/nsp4255F255delTTC---11AY.360.000148
ORF1ab/nsp4255F255LTtcCtc11AY.360.000148
ORF1ab/nsp4255F255FttCttT11AY.370.000316
ORF1ab/nsp4255F255FttCttT11AY.380.000499
ORF1ab/nsp4255F255LTtcCtc11AY.390.000025
ORF1ab/nsp4255F255delTTC---11AY.4.10.000737
ORF1ab/nsp4255F255FttCttT11AY.4.30.000842
ORF1ab/nsp4255F255del1ttCtt-11AY.400.000964
ORF1ab/nsp4255F255FttCttT11AY.400.000964
ORF1ab/nsp4255F255LttCttA11AY.430.000004
ORF1ab/nsp4255F255ITtcAtc11AY.440.000006
ORF1ab/nsp4255F255FttCttT11AY.46.20.000635
ORF1ab/nsp4255F255FttCttT11AY.46.30.000934
ORF1ab/nsp4255F255FttCttT11AY.480.000465
ORF1ab/nsp4255F255StTCtCT11AY.480.000465
ORF1ab/nsp4255F255FttCttT11AY.5.30.000337
ORF1ab/nsp4255F255FttCttT11AY.550.000917
ORF1ab/nsp4255F255FttCttT11AY.580.000907
ORF1ab/nsp4255F255FttCttT11AY.680.000274
ORF1ab/nsp4255F255VTtcGtc11AY.710.000475
ORF1ab/nsp4255F255FttCttT11AY.770.001127
ORF1ab/nsp4255F255delTTC---11AY.810.001992
ORF1ab/nsp4255F255FttCttT11AY.90.000068
ORF1ab/nsp4255F255delTTC---11AY.90.000068
ORF1ab/nsp4255F255delTTC---11AY.9.20.000037
ORF1ab/nsp4255F255StTctCc11AY.910.00073
ORF1ab/nsp4255F255FttCttT11AY.920.000287
ORF1ab/nsp4255F255CtTctGc11B.10.000009
ORF1ab/nsp4255F255StTctCc11B.10.000009
ORF1ab/nsp4255F255delTTC---11B.10.000009
ORF1ab/nsp4255F255FttCttT11B.1.1.100.001115
ORF1ab/nsp4255F255FttCttT11B.1.1.1740.003378
ORF1ab/nsp4255F255VTtcGtc11B.1.1.1940.00495
ORF1ab/nsp4255F255FttCttT11B.1.1.1980.001468
ORF1ab/nsp4255F255FttCttT11B.1.1.2200.001859
ORF1ab/nsp4255F255delTTC---11B.1.1.2320.001815
ORF1ab/nsp4255F255FttCttT11B.1.1.2550.00303
ORF1ab/nsp4255F255FttCttT11B.1.1.2800.003086
ORF1ab/nsp4255F255FttCttT11B.1.1.2840.000107
ORF1ab/nsp4255F255FttCttT11B.1.1.2900.018182
ORF1ab/nsp4255F255LttCttA11B.1.1.3340.016393
ORF1ab/nsp4255F255FttCttT11B.1.1.370.000193
ORF1ab/nsp4255F255delTTC---11B.1.1.370.000193
ORF1ab/nsp4255F255FttCttT11B.1.1.3950.055556
ORF1ab/nsp4255F255FttCttT11B.1.1.4090.002833
ORF1ab/nsp4255F255FttCttT11B.1.1.460.004367
ORF1ab/nsp4255F255StTctCc11B.1.1.70.000001
ORF1ab/nsp4255F255del1ttCtt-11B.1.1.70.000001
ORF1ab/nsp4255F255FttCttT11B.1.1.890.006061
ORF1ab/nsp4255F255FttCttT11B.1.1570.002985
ORF1ab/nsp4255F255YtTctAc11B.1.1770.000013
ORF1ab/nsp4255F255del1ttCtt-11B.1.1770.000013
ORF1ab/nsp4255F255LTtcCtc11B.1.1770.000013
ORF1ab/nsp4255F255FttCttT11B.1.177.160.000664
ORF1ab/nsp4255F255FttCttT11B.1.177.170.000821
ORF1ab/nsp4255F255delTTC---11B.1.177.170.000821
ORF1ab/nsp4255F255FttCttT11B.1.177.180.00116
ORF1ab/nsp4255F255LttCttA11B.1.177.190.001431
ORF1ab/nsp4255F255FttCttT11B.1.177.40.000211
ORF1ab/nsp4255F255FttCttT11B.1.177.460.000918
ORF1ab/nsp4255F255delTTC---11B.1.177.510.004566
ORF1ab/nsp4255F255delTTC---11B.1.177.540.000606
ORF1ab/nsp4255F255delTTC---11B.1.177.600.000218
ORF1ab/nsp4255F255FttCttT11B.1.177.650.000665
ORF1ab/nsp4255F255FttCttT11B.1.177.730.000566
ORF1ab/nsp4255F255delTTC---11B.1.177.810.000189
ORF1ab/nsp4255F255CtTctGc11B.1.177.860.000183
ORF1ab/nsp4255F255delTTC---11B.1.20.000009
ORF1ab/nsp4255F255StTctCc11B.1.20.000009
ORF1ab/nsp4255F255FttCttT11B.1.221.10.002907
ORF1ab/nsp4255F255delTTC---11B.1.230.006061
ORF1ab/nsp4255F255FttCttT11B.1.2340.000132
ORF1ab/nsp4255F255StTctCc11B.1.2430.00007
ORF1ab/nsp4255F255FttCttT11B.1.2760.016949
ORF1ab/nsp4255F255StTctCc11B.1.3510.00003
ORF1ab/nsp4255F255FttCttT11B.1.3670.000792
ORF1ab/nsp4255F255FttCttT11B.1.3830.009009
ORF1ab/nsp4255F255FttCttT11B.1.4160.001269
ORF1ab/nsp4255F255FttCttT11B.1.4260.001009
ORF1ab/nsp4255F255FttCttT11B.1.4270.00005
ORF1ab/nsp4255F255FttCttT11B.1.4620.007246
ORF1ab/nsp4255F255FttCttT11B.1.4800.002488
ORF1ab/nsp4255F255FttCttT11B.1.5090.000866
ORF1ab/nsp4255F255FttCttT11B.1.5250.000113
ORF1ab/nsp4255F255CtTctGc11B.1.5260.000024
ORF1ab/nsp4255F255FttCttT11B.1.5270.003704
ORF1ab/nsp4255F255FttCttT11B.1.5330.009615
ORF1ab/nsp4255F255FttCttT11B.1.5450.014493
ORF1ab/nsp4255F255FttCttT11B.1.5640.000426
ORF1ab/nsp4255F255LttCttA11B.1.5640.000426
ORF1ab/nsp4255F255FttCttT11B.1.564.10.001577
ORF1ab/nsp4255F255FttCttT11B.1.5950.000261
ORF1ab/nsp4255F255StTctCc11B.1.5960.000087
ORF1ab/nsp4255F255FttCttT11B.1.617.10.000129
ORF1ab/nsp4255F255LttCttA11B.1.617.20.000004
ORF1ab/nsp4255F255CtTctGc11B.1.617.20.000004
ORF1ab/nsp4255F255ITtcAtc11B.1.617.20.000004
ORF1ab/nsp4255F255FttCttT11B.1.6180.004032
ORF1ab/nsp4255F255del1ttCtt-11B.1.6190.000871
ORF1ab/nsp4255F255FttCttT11B.1.6310.003367
ORF1ab/nsp4255F255FttCttT11B.1.6340.003425
ORF1ab/nsp4255F255FttCttT11B.1.780.008547
ORF1ab/nsp4255F255delTTC---11B.150.017544
ORF1ab/nsp4255F255YtTctAc11B.40.002208
ORF1ab/nsp4255F255delTTC---11B.4.40.018868
ORF1ab/nsp4255F255FttCttT11B.60.00091
ORF1ab/nsp4255F255FttCttT11B.610.005747
ORF1ab/nsp4255F255FttCttT11C.10.002392
ORF1ab/nsp4255F255FttCttT11C.170.055556
ORF1ab/nsp4255F255delTTC---11P.10.000016
ORF1ab/nsp4255F255FttCttT11P.1.170.000162
ORF1ab/nsp4255F255FttCttT11P.1.20.001156
ORF1ab/nsp4255F255FttCttT11P.1.70.000319