CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 238 & Codon = aTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4238S238IS3001InonsynaGtaTt3032200.7260739266-9268

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4238S238IaGtaTt220303All0.000042
ORF1ab/nsp4238S238IaGtaTt138213B.1.1.70.000124
ORF1ab/nsp4238S238IaGtaTt4242AY.40.000065
ORF1ab/nsp4238S238IaGtaTt47P.10.000063
ORF1ab/nsp4238S238IaGtaTt66AY.430.000027
ORF1ab/nsp4238S238IaGtaTt35B.1.617.20.000011
ORF1ab/nsp4238S238IaGtaTt34B.10.000027
ORF1ab/nsp4238S238IaGtaTt33AY.250.000018
ORF1ab/nsp4238S238IaGtaTt33B.1.20.000026
ORF1ab/nsp4238S238IaGtaTt33D.20.000225
ORF1ab/nsp4238S238IaGtaTt12B.1.10.000018
ORF1ab/nsp4238S238IaGtaTt12B.1.5760.000907
ORF1ab/nsp4238S238IaGtaTt11AY.1000.000046
ORF1ab/nsp4238S238IaGtaTt11AY.1030.000006
ORF1ab/nsp4238S238IaGtaTt11AY.30.00001
ORF1ab/nsp4238S238IaGtaTt11AY.440.000006
ORF1ab/nsp4238S238IaGtaTt11AY.470.000031
ORF1ab/nsp4238S238IaGtaTt11AY.5.30.000337
ORF1ab/nsp4238S238IaGtaTt11AY.650.000533
ORF1ab/nsp4238S238IaGtaTt11AY.75.10.00018
ORF1ab/nsp4238S238IaGtaTt11AY.980.000079
ORF1ab/nsp4238S238IaGtaTt11B.1.1.1890.001513
ORF1ab/nsp4238S238IaGtaTt11B.1.1.3110.000358
ORF1ab/nsp4238S238IaGtaTt11B.1.1.5190.00004
ORF1ab/nsp4238S238IaGtaTt11B.1.177.40.000211