CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp4 | 233 | V233I | V2996I | nonsyn | Gtt | Att | 2397 | 2339 | 0.975803 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233I | V2996I | nonsyn | GtT | AtA | 2397 | 44 | 0.0183563 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233I | V2996I | nonsyn | GtT | AtC | 2397 | 14 | 0.00584063 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233F | V2996F | nonsyn | Gtt | Ttt | 677 | 665 | 0.982275 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233F | V2996F | nonsyn | GtT | TtC | 677 | 12 | 0.0177253 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233V | V2996V | syn | gtT | gtC | 491 | 353 | 0.718941 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233V | V2996V | syn | gtT | gtA | 491 | 84 | 0.171079 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233V | V2996V | syn | gtT | gtG | 491 | 54 | 0.10998 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233D | V2996D | nonsyn | gTt | gAt | 116 | 104 | 0.896552 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233D | V2996D | nonsyn | gTT | gAC | 116 | 12 | 0.103448 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233Y | V2996Y | nonsyn | GTt | TAt | 85 | 75 | 0.882353 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233Y | V2996Y | nonsyn | GTT | TAC | 85 | 10 | 0.117647 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233E | V2996E | nonsyn | gTT | gAA | 75 | 52 | 0.693333 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233E | V2996E | nonsyn | gTT | gAG | 75 | 23 | 0.306667 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233L | V2996L | nonsyn | GtT | TtA | 70 | 49 | 0.7 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233L | V2996L | nonsyn | GtT | TtG | 70 | 20 | 0.285714 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233L | V2996L | nonsyn | Gtt | Ctt | 70 | 1 | 0.0142857 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233N | V2996N | nonsyn | GTt | AAt | 68 | 60 | 0.882353 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233N | V2996N | nonsyn | GTT | AAC | 68 | 8 | 0.117647 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233X | V2996X | nonsyn | GTT | TAA | 63 | 42 | 0.666667 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233X | V2996X | nonsyn | GTT | TAG | 63 | 16 | 0.253968 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233X | V2996X | nonsyn | GTT | TGA | 63 | 5 | 0.0793651 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233K | V2996K | nonsyn | GTT | AAA | 52 | 37 | 0.711538 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233K | V2996K | nonsyn | GTT | AAG | 52 | 15 | 0.288462 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233del | V2996del | del | GTT | --- | 44 | 44 | 1 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233G | V2996G | nonsyn | gTt | gGt | 43 | 25 | 0.581395 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233G | V2996G | nonsyn | gTT | gGC | 43 | 8 | 0.186047 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233G | V2996G | nonsyn | gTT | gGA | 43 | 8 | 0.186047 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233G | V2996G | nonsyn | gTT | gGG | 43 | 2 | 0.0465116 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233S | V2996S | nonsyn | GTt | AGt | 39 | 22 | 0.564103 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233S | V2996S | nonsyn | GTT | AGC | 39 | 11 | 0.282051 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233S | V2996S | nonsyn | GTT | TCG | 39 | 2 | 0.0512821 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233S | V2996S | nonsyn | GTt | TCt | 39 | 2 | 0.0512821 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233S | V2996S | nonsyn | GTT | TCA | 39 | 2 | 0.0512821 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233A | V2996A | nonsyn | gTt | gCt | 30 | 21 | 0.7 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233A | V2996A | nonsyn | gTT | gCA | 30 | 6 | 0.2 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233A | V2996A | nonsyn | gTT | gCG | 30 | 3 | 0.1 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233M | V2996M | nonsyn | GtT | AtG | 20 | 20 | 1 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233C | V2996C | nonsyn | GTt | TGt | 15 | 12 | 0.8 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233C | V2996C | nonsyn | GTT | TGC | 15 | 3 | 0.2 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233T | V2996T | nonsyn | GTT | ACA | 14 | 6 | 0.428571 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233T | V2996T | nonsyn | GTt | ACt | 14 | 5 | 0.357143 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233T | V2996T | nonsyn | GTT | ACG | 14 | 3 | 0.214286 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233R | V2996R | nonsyn | GTT | AGA | 8 | 7 | 0.875 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233R | V2996R | nonsyn | GTT | AGG | 8 | 1 | 0.125 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233W | V2996W | nonsyn | GTT | TGG | 2 | 2 | 1 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233del1 | V2996del1 | del | gTt | g-t | 2 | 1 | 0.5 | 9251-9253 |
ORF1ab/nsp4 | 233 | V233del1 | V2996del1 | del | Gtt | -tt | 2 | 1 | 0.5 | 9251-9253 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 2339 | 2397 | All | 0.000447 |
ORF1ab/nsp4 | 233 | V233I | GtT | AtA | 44 | 2397 | All | 0.000008 |
ORF1ab/nsp4 | 233 | V233I | GtT | AtC | 14 | 2397 | All | 0.000003 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1235 | 1235 | AY.90 | 0.845311 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 705 | 705 | AY.4 | 0.001097 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 665 | 677 | All | 0.000127 |
ORF1ab/nsp4 | 233 | V233F | GtT | TtC | 12 | 677 | All | 0.000002 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 353 | 491 | All | 0.000068 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtA | 84 | 491 | All | 0.000016 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtG | 54 | 491 | All | 0.00001 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 290 | 371 | B.1.1.7 | 0.00026 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtA | 57 | 371 | B.1.1.7 | 0.000051 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtG | 24 | 371 | B.1.1.7 | 0.000021 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 92 | 143 | B.1.1.7 | 0.000082 |
ORF1ab/nsp4 | 233 | V233I | GtT | AtA | 38 | 143 | B.1.1.7 | 0.000034 |
ORF1ab/nsp4 | 233 | V233I | GtT | AtC | 13 | 143 | B.1.1.7 | 0.000012 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 118 | 129 | B.1.1.7 | 0.000106 |
ORF1ab/nsp4 | 233 | V233F | GtT | TtC | 11 | 129 | B.1.1.7 | 0.00001 |
ORF1ab/nsp4 | 233 | V233D | gTt | gAt | 104 | 116 | All | 0.00002 |
ORF1ab/nsp4 | 233 | V233D | gTT | gAC | 12 | 116 | All | 0.000002 |
ORF1ab/nsp4 | 233 | V233D | gTt | gAt | 91 | 101 | B.1.1.7 | 0.000081 |
ORF1ab/nsp4 | 233 | V233D | gTT | gAC | 10 | 101 | B.1.1.7 | 0.000009 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 100 | 100 | AY.33 | 0.006678 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 91 | 91 | AY.119 | 0.003213 |
ORF1ab/nsp4 | 233 | V233Y | GTt | TAt | 75 | 85 | All | 0.000014 |
ORF1ab/nsp4 | 233 | V233Y | GTT | TAC | 10 | 85 | All | 0.000002 |
ORF1ab/nsp4 | 233 | V233Y | GTt | TAt | 69 | 79 | B.1.1.7 | 0.000062 |
ORF1ab/nsp4 | 233 | V233Y | GTT | TAC | 10 | 79 | B.1.1.7 | 0.000009 |
ORF1ab/nsp4 | 233 | V233E | gTT | gAA | 52 | 75 | All | 0.00001 |
ORF1ab/nsp4 | 233 | V233E | gTT | gAG | 23 | 75 | All | 0.000004 |
ORF1ab/nsp4 | 233 | V233L | GtT | TtA | 49 | 70 | All | 0.000009 |
ORF1ab/nsp4 | 233 | V233L | GtT | TtG | 20 | 70 | All | 0.000004 |
ORF1ab/nsp4 | 233 | V233L | Gtt | Ctt | 1 | 70 | All | 0 |
ORF1ab/nsp4 | 233 | V233N | GTt | AAt | 60 | 68 | All | 0.000011 |
ORF1ab/nsp4 | 233 | V233N | GTT | AAC | 8 | 68 | All | 0.000002 |
ORF1ab/nsp4 | 233 | V233E | gTT | gAA | 47 | 64 | B.1.1.7 | 0.000042 |
ORF1ab/nsp4 | 233 | V233E | gTT | gAG | 17 | 64 | B.1.1.7 | 0.000015 |
ORF1ab/nsp4 | 233 | V233X | GTT | TAA | 42 | 63 | All | 0.000008 |
ORF1ab/nsp4 | 233 | V233X | GTT | TAG | 16 | 63 | All | 0.000003 |
ORF1ab/nsp4 | 233 | V233X | GTT | TGA | 5 | 63 | All | 0.000001 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 63 | 63 | AY.4 | 0.000098 |
ORF1ab/nsp4 | 233 | V233L | GtT | TtA | 45 | 61 | B.1.1.7 | 0.00004 |
ORF1ab/nsp4 | 233 | V233L | GtT | TtG | 16 | 61 | B.1.1.7 | 0.000014 |
ORF1ab/nsp4 | 233 | V233N | GTt | AAt | 50 | 56 | B.1.1.7 | 0.000045 |
ORF1ab/nsp4 | 233 | V233X | GTT | TAA | 39 | 56 | B.1.1.7 | 0.000035 |
ORF1ab/nsp4 | 233 | V233X | GTT | TAG | 13 | 56 | B.1.1.7 | 0.000012 |
ORF1ab/nsp4 | 233 | V233N | GTT | AAC | 6 | 56 | B.1.1.7 | 0.000005 |
ORF1ab/nsp4 | 233 | V233X | GTT | TGA | 4 | 56 | B.1.1.7 | 0.000004 |
ORF1ab/nsp4 | 233 | V233K | GTT | AAA | 37 | 52 | All | 0.000007 |
ORF1ab/nsp4 | 233 | V233K | GTT | AAG | 15 | 52 | All | 0.000003 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 49 | 49 | AY.103 | 0.000304 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 46 | 46 | B.1.617.2 | 0.000173 |
ORF1ab/nsp4 | 233 | V233del | GTT | --- | 44 | 44 | All | 0.000008 |
ORF1ab/nsp4 | 233 | V233G | gTt | gGt | 25 | 43 | All | 0.000005 |
ORF1ab/nsp4 | 233 | V233G | gTT | gGA | 8 | 43 | All | 0.000002 |
ORF1ab/nsp4 | 233 | V233G | gTT | gGC | 8 | 43 | All | 0.000002 |
ORF1ab/nsp4 | 233 | V233G | gTT | gGG | 2 | 43 | All | 0 |
ORF1ab/nsp4 | 233 | V233K | GTT | AAA | 33 | 41 | B.1.1.7 | 0.00003 |
ORF1ab/nsp4 | 233 | V233K | GTT | AAG | 8 | 41 | B.1.1.7 | 0.000007 |
ORF1ab/nsp4 | 233 | V233S | GTt | AGt | 22 | 39 | All | 0.000004 |
ORF1ab/nsp4 | 233 | V233S | GTT | AGC | 11 | 39 | All | 0.000002 |
ORF1ab/nsp4 | 233 | V233S | GTT | TCA | 2 | 39 | All | 0 |
ORF1ab/nsp4 | 233 | V233S | GTt | TCt | 2 | 39 | All | 0 |
ORF1ab/nsp4 | 233 | V233S | GTT | TCG | 2 | 39 | All | 0 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 37 | 37 | AY.43 | 0.000164 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 34 | 34 | B.1.617.2 | 0.000128 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 32 | 32 | AY.44 | 0.000195 |
ORF1ab/nsp4 | 233 | V233G | gTt | gGt | 18 | 32 | B.1.1.7 | 0.000016 |
ORF1ab/nsp4 | 233 | V233S | GTt | AGt | 18 | 32 | B.1.1.7 | 0.000016 |
ORF1ab/nsp4 | 233 | V233S | GTT | AGC | 11 | 32 | B.1.1.7 | 0.00001 |
ORF1ab/nsp4 | 233 | V233G | gTT | gGC | 7 | 32 | B.1.1.7 | 0.000006 |
ORF1ab/nsp4 | 233 | V233G | gTT | gGA | 6 | 32 | B.1.1.7 | 0.000005 |
ORF1ab/nsp4 | 233 | V233S | GTT | TCA | 1 | 32 | B.1.1.7 | 0.000001 |
ORF1ab/nsp4 | 233 | V233G | gTT | gGG | 1 | 32 | B.1.1.7 | 0.000001 |
ORF1ab/nsp4 | 233 | V233S | GTt | TCt | 1 | 32 | B.1.1.7 | 0.000001 |
ORF1ab/nsp4 | 233 | V233S | GTT | TCG | 1 | 32 | B.1.1.7 | 0.000001 |
ORF1ab/nsp4 | 233 | V233A | gTt | gCt | 21 | 30 | All | 0.000004 |
ORF1ab/nsp4 | 233 | V233A | gTT | gCA | 6 | 30 | All | 0.000001 |
ORF1ab/nsp4 | 233 | V233A | gTT | gCG | 3 | 30 | All | 0.000001 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 29 | 29 | B.1.2 | 0.000255 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtA | 22 | 28 | B.1 | 0.000202 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtG | 3 | 28 | B.1 | 0.000027 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 3 | 28 | B.1 | 0.000027 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 24 | 24 | AY.103 | 0.000149 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 23 | 23 | AY.43 | 0.000102 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 21 | 21 | AY.25 | 0.000126 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 21 | 21 | AY.90 | 0.014374 |
ORF1ab/nsp4 | 233 | V233M | GtT | AtG | 20 | 20 | All | 0.000004 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 20 | 20 | AY.39.1 | 0.000792 |
ORF1ab/nsp4 | 233 | V233A | gTt | gCt | 16 | 20 | B.1.1.7 | 0.000014 |
ORF1ab/nsp4 | 233 | V233A | gTT | gCA | 3 | 20 | B.1.1.7 | 0.000003 |
ORF1ab/nsp4 | 233 | V233A | gTT | gCG | 1 | 20 | B.1.1.7 | 0.000001 |
ORF1ab/nsp4 | 233 | V233del | GTT | --- | 18 | 18 | B.1.1.7 | 0.000016 |
ORF1ab/nsp4 | 233 | V233C | GTt | TGt | 12 | 15 | All | 0.000002 |
ORF1ab/nsp4 | 233 | V233C | GTT | TGC | 3 | 15 | All | 0.000001 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 15 | 15 | B.1.596 | 0.001307 |
ORF1ab/nsp4 | 233 | V233T | GTT | ACA | 6 | 14 | All | 0.000001 |
ORF1ab/nsp4 | 233 | V233T | GTt | ACt | 5 | 14 | All | 0.000001 |
ORF1ab/nsp4 | 233 | V233T | GTT | ACG | 3 | 14 | All | 0.000001 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 13 | 13 | AY.92 | 0.003735 |
ORF1ab/nsp4 | 233 | V233C | GTt | TGt | 10 | 13 | B.1.1.7 | 0.000009 |
ORF1ab/nsp4 | 233 | V233C | GTT | TGC | 3 | 13 | B.1.1.7 | 0.000003 |
ORF1ab/nsp4 | 233 | V233M | GtT | AtG | 11 | 11 | B.1.1.7 | 0.00001 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 10 | 10 | A.29 | 0.053191 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 7 | 10 | B.1 | 0.000064 |
ORF1ab/nsp4 | 233 | V233I | GtT | AtA | 2 | 10 | B.1 | 0.000018 |
ORF1ab/nsp4 | 233 | V233I | GtT | AtC | 1 | 10 | B.1 | 0.000009 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 10 | 10 | B.1.427 | 0.000505 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 6 | 10 | B.1.617.2 | 0.000023 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtG | 4 | 10 | B.1.617.2 | 0.000015 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 9 | 9 | AY.57 | 0.005906 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 9 | 9 | AY.84 | 0.003937 |
ORF1ab/nsp4 | 233 | V233R | GTT | AGA | 7 | 8 | All | 0.000001 |
ORF1ab/nsp4 | 233 | V233R | GTT | AGG | 1 | 8 | All | 0 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtG | 8 | 8 | AY.43 | 0.000035 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 8 | 8 | AY.44 | 0.000049 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 7 | 8 | B.1.429 | 0.000165 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtG | 1 | 8 | B.1.429 | 0.000024 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 7 | 7 | AY.100 | 0.000322 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 7 | 7 | AY.103 | 0.000043 |
ORF1ab/nsp4 | 233 | V233T | GTT | ACA | 3 | 7 | B.1.1.7 | 0.000003 |
ORF1ab/nsp4 | 233 | V233T | GTt | ACt | 3 | 7 | B.1.1.7 | 0.000003 |
ORF1ab/nsp4 | 233 | V233T | GTT | ACG | 1 | 7 | B.1.1.7 | 0.000001 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 6 | 6 | AY.3 | 0.00006 |
ORF1ab/nsp4 | 233 | V233D | gTt | gAt | 5 | 6 | B.1 | 0.000046 |
ORF1ab/nsp4 | 233 | V233D | gTT | gAC | 1 | 6 | B.1 | 0.000009 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 6 | 6 | B.1.177.12 | 0.00091 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 5 | 5 | AY.102 | 0.000133 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 5 | 5 | AY.118 | 0.000313 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 5 | 5 | AY.121 | 0.000677 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 5 | 5 | AY.29 | 0.000079 |
ORF1ab/nsp4 | 233 | V233N | GTt | AAt | 4 | 5 | B.1 | 0.000037 |
ORF1ab/nsp4 | 233 | V233K | GTT | AAG | 3 | 5 | B.1 | 0.000027 |
ORF1ab/nsp4 | 233 | V233E | gTT | gAG | 3 | 5 | B.1 | 0.000027 |
ORF1ab/nsp4 | 233 | V233E | gTT | gAA | 2 | 5 | B.1 | 0.000018 |
ORF1ab/nsp4 | 233 | V233K | GTT | AAA | 2 | 5 | B.1 | 0.000018 |
ORF1ab/nsp4 | 233 | V233N | GTT | AAC | 1 | 5 | B.1 | 0.000009 |
ORF1ab/nsp4 | 233 | V233R | GTT | AGA | 5 | 5 | B.1.1.7 | 0.000004 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 5 | 5 | Q.8 | 0.000825 |
ORF1ab/nsp4 | 233 | V233G | gTt | gGt | 2 | 4 | 0.111111 | |
ORF1ab/nsp4 | 233 | V233S | GTT | TCA | 1 | 4 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233G | gTT | gGA | 1 | 4 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233G | gTT | gGG | 1 | 4 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233S | GTt | AGt | 1 | 4 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233S | GTt | TCt | 1 | 4 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233S | GTT | TCG | 1 | 4 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 4 | 4 | AY.3 | 0.00004 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 4 | 4 | AY.7.2 | 0.002237 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 4 | 4 | AY.98 | 0.000316 |
ORF1ab/nsp4 | 233 | V233A | gTt | gCt | 2 | 4 | B.1 | 0.000018 |
ORF1ab/nsp4 | 233 | V233A | gTT | gCA | 1 | 4 | B.1 | 0.000009 |
ORF1ab/nsp4 | 233 | V233A | gTT | gCG | 1 | 4 | B.1 | 0.000009 |
ORF1ab/nsp4 | 233 | V233del | GTT | --- | 4 | 4 | B.1.177 | 0.000053 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 3 | 4 | B.1.2 | 0.000026 |
ORF1ab/nsp4 | 233 | V233F | GtT | TtC | 1 | 4 | B.1.2 | 0.000009 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 2 | 3 | 0.111111 | |
ORF1ab/nsp4 | 233 | V233A | gTt | gCt | 1 | 3 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233I | GtT | AtA | 1 | 3 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233T | GTT | ACG | 1 | 3 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233T | GTt | ACt | 1 | 3 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233A | gTT | gCA | 1 | 3 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233A | gTT | gCG | 1 | 3 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233T | GTT | ACA | 1 | 3 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 3 | 3 | AY.119 | 0.000106 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 3 | 3 | AY.20 | 0.000117 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 3 | 3 | AY.29 | 0.000047 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 3 | 3 | AY.4.2 | 0.000065 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 3 | 3 | AY.46 | 0.000312 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 3 | 3 | AY.77 | 0.003382 |
ORF1ab/nsp4 | 233 | V233G | gTt | gGt | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp4 | 233 | V233M | GtT | AtG | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp4 | 233 | V233T | GTT | ACA | 1 | 3 | B.1 | 0.000009 |
ORF1ab/nsp4 | 233 | V233T | GTt | ACt | 1 | 3 | B.1 | 0.000009 |
ORF1ab/nsp4 | 233 | V233T | GTT | ACG | 1 | 3 | B.1 | 0.000009 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 3 | 3 | B.1.1.398 | 0.009677 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 3 | 3 | B.1.160 | 0.000094 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 3 | 3 | B.1.177 | 0.00004 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 2 | 3 | B.1.221 | 0.000142 |
ORF1ab/nsp4 | 233 | V233I | GtT | AtA | 1 | 3 | B.1.221 | 0.000071 |
ORF1ab/nsp4 | 233 | V233del | GTT | --- | 3 | 3 | B.1.617.2 | 0.000011 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 3 | 3 | B.1.621 | 0.000266 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 3 | 3 | B.1.628 | 0.001057 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 3 | 3 | N.5 | 0.0053 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 3 | 3 | P.1 | 0.000047 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 3 | 3 | P.1 | 0.000047 |
ORF1ab/nsp4 | 233 | V233D | gTt | gAt | 3 | 3 | P.1 | 0.000047 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtG | 2 | 3 | P.1 | 0.000032 |
ORF1ab/nsp4 | 233 | V233E | gTT | gAG | 2 | 3 | P.1 | 0.000032 |
ORF1ab/nsp4 | 233 | V233E | gTT | gAA | 1 | 3 | P.1 | 0.000016 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtA | 1 | 3 | P.1 | 0.000016 |
ORF1ab/nsp4 | 233 | V233C | GTt | TGt | 2 | 2 | 0.111111 | |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 2 | 2 | 0.111111 | |
ORF1ab/nsp4 | 233 | V233R | GTT | AGA | 1 | 2 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233L | GtT | TtG | 1 | 2 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233L | GtT | TtA | 1 | 2 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233V | gtT | gtG | 1 | 2 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233R | GTT | AGG | 1 | 2 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233V | gtT | gtA | 1 | 2 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 2 | 2 | A | 0.000774 |
ORF1ab/nsp4 | 233 | V233W | GTT | TGG | 2 | 2 | All | 0 |
ORF1ab/nsp4 | 233 | V233del1 | gTt | g-t | 1 | 2 | All | 0 |
ORF1ab/nsp4 | 233 | V233del1 | Gtt | -tt | 1 | 2 | All | 0 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 2 | 2 | AY.121 | 0.000271 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 2 | 2 | AY.20 | 0.000078 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 2 | 2 | AY.27 | 0.000129 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 2 | 2 | AY.32 | 0.001065 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 2 | 2 | AY.34 | 0.000194 |
ORF1ab/nsp4 | 233 | V233del | GTT | --- | 2 | 2 | AY.35 | 0.000466 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 2 | 2 | AY.39 | 0.000049 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 2 | 2 | AY.4.2 | 0.000043 |
ORF1ab/nsp4 | 233 | V233del | GTT | --- | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 2 | 2 | AY.42 | 0.00008 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtG | 2 | 2 | AY.6 | 0.000082 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 2 | 2 | AY.61 | 0.00021 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 2 | 2 | AY.63 | 0.000774 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 2 | 2 | AY.70 | 0.000417 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 2 | 2 | AY.75.1 | 0.000361 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 2 | 2 | AY.79 | 0.002421 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 2 | 2 | AY.9.2 | 0.000073 |
ORF1ab/nsp4 | 233 | V233S | GTt | AGt | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp4 | 233 | V233del | GTT | --- | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtA | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 1 | 2 | B.1.1 | 0.000018 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 2 | 2 | B.1.1.519 | 0.000079 |
ORF1ab/nsp4 | 233 | V233N | GTT | AAC | 1 | 2 | B.1.2 | 0.000009 |
ORF1ab/nsp4 | 233 | V233D | gTT | gAC | 1 | 2 | B.1.2 | 0.000009 |
ORF1ab/nsp4 | 233 | V233N | GTt | AAt | 1 | 2 | B.1.2 | 0.000009 |
ORF1ab/nsp4 | 233 | V233D | gTt | gAt | 1 | 2 | B.1.2 | 0.000009 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtA | 1 | 2 | B.1.221 | 0.000071 |
ORF1ab/nsp4 | 233 | V233G | gTt | gGt | 1 | 2 | B.1.221 | 0.000071 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtG | 1 | 2 | B.1.221 | 0.000071 |
ORF1ab/nsp4 | 233 | V233G | gTT | gGA | 1 | 2 | B.1.221 | 0.000071 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 2 | B.1.258 | 0.000067 |
ORF1ab/nsp4 | 233 | V233I | GtT | AtA | 1 | 2 | B.1.258 | 0.000067 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 2 | 2 | B.1.526 | 0.000047 |
ORF1ab/nsp4 | 233 | V233I | GtT | AtA | 1 | 2 | B.1.576 | 0.000907 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 2 | B.1.576 | 0.000907 |
ORF1ab/nsp4 | 233 | V233X | GTT | TAG | 1 | 2 | B.1.576 | 0.000907 |
ORF1ab/nsp4 | 233 | V233L | GtT | TtA | 1 | 2 | B.1.576 | 0.000907 |
ORF1ab/nsp4 | 233 | V233K | GTT | AAG | 1 | 2 | B.1.576 | 0.000907 |
ORF1ab/nsp4 | 233 | V233K | GTT | AAA | 1 | 2 | B.1.576 | 0.000907 |
ORF1ab/nsp4 | 233 | V233L | GtT | TtG | 1 | 2 | B.1.576 | 0.000907 |
ORF1ab/nsp4 | 233 | V233X | GTT | TAA | 1 | 2 | B.1.576 | 0.000907 |
ORF1ab/nsp4 | 233 | V233X | GTT | TAG | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp4 | 233 | V233L | GtT | TtG | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp4 | 233 | V233Y | GTt | TAt | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp4 | 233 | V233K | GTT | AAG | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp4 | 233 | V233M | GtT | AtG | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp4 | 233 | V233N | GTt | AAt | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 2 | 2 | Q.7 | 0.002222 |
ORF1ab/nsp4 | 233 | V233W | GTT | TGG | 1 | 1 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233M | GtT | AtG | 1 | 1 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233X | GTT | TGA | 1 | 1 | 0.055556 | |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | A.23.1 | 0.000704 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | AA.2 | 0.007692 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | AY.102 | 0.000027 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp4 | 233 | V233del | GTT | --- | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp4 | 233 | V233del | GTT | --- | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtG | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtG | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp4 | 233 | V233del1 | gTt | g-t | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp4 | 233 | V233G | gTT | gGC | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp4 | 233 | V233del | GTT | --- | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp4 | 233 | V233A | gTt | gCt | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | AY.4.4 | 0.000409 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtG | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp4 | 233 | V233del | GTT | --- | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtG | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtG | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | AY.64 | 0.000595 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 1 | 1 | AY.70 | 0.000209 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp4 | 233 | V233del | GTT | --- | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp4 | 233 | V233G | gTt | gGt | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp4 | 233 | V233del | GTT | --- | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | AY.9.2.1 | 0.001976 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp4 | 233 | V233del | GTT | --- | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp4 | 233 | V233E | gTT | gAA | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp4 | 233 | V233Y | GTt | TAt | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp4 | 233 | V233D | gTt | gAt | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp4 | 233 | V233L | GtT | TtA | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp4 | 233 | V233X | GTT | TAA | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | B.1.1.277 | 0.000759 |
ORF1ab/nsp4 | 233 | V233del | GTT | --- | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp4 | 233 | V233W | GTT | TGG | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtG | 1 | 1 | B.1.177.12 | 0.000152 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 1 | 1 | B.1.177.15 | 0.000631 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | B.1.177.16 | 0.000664 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | B.1.177.37 | 0.027027 |
ORF1ab/nsp4 | 233 | V233del | GTT | --- | 1 | 1 | B.1.177.51 | 0.004566 |
ORF1ab/nsp4 | 233 | V233L | Gtt | Ctt | 1 | 1 | B.1.177.63 | 0.002703 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtG | 1 | 1 | B.1.177.87 | 0.000728 |
ORF1ab/nsp4 | 233 | V233del | GTT | --- | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp4 | 233 | V233Y | GTt | TAt | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp4 | 233 | V233A | gTt | gCt | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp4 | 233 | V233D | gTt | gAt | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp4 | 233 | V233M | GtT | AtG | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp4 | 233 | V233R | GTT | AGA | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp4 | 233 | V233S | GTt | AGt | 1 | 1 | B.1.221 | 0.000071 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtA | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp4 | 233 | V233E | gTT | gAA | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp4 | 233 | V233D | gTt | gAt | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp4 | 233 | V233N | GTt | AAt | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp4 | 233 | V233K | GTT | AAA | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtG | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 1 | 1 | B.1.351.5 | 0.0006 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | B.1.36.22 | 0.001208 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 1 | 1 | B.1.389 | 0.001002 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | B.1.389 | 0.001002 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp4 | 233 | V233del | GTT | --- | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | B.1.560 | 0.00463 |
ORF1ab/nsp4 | 233 | V233Y | GTt | TAt | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp4 | 233 | V233N | GTt | AAt | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp4 | 233 | V233M | GtT | AtG | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp4 | 233 | V233F | Gtt | Ttt | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp4 | 233 | V233D | gTt | gAt | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp4 | 233 | V233M | GtT | AtG | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp4 | 233 | V233N | GTt | AAt | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp4 | 233 | V233A | gTT | gCA | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp4 | 233 | V233K | GTT | AAG | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp4 | 233 | V233E | gTT | gAG | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp4 | 233 | V233del | GTT | --- | 1 | 1 | B.15 | 0.017544 |
ORF1ab/nsp4 | 233 | V233del | GTT | --- | 1 | 1 | B.4.4 | 0.018868 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | C.1.2 | 0.004255 |
ORF1ab/nsp4 | 233 | V233T | GTT | ACA | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp4 | 233 | V233V | gtT | gtC | 1 | 1 | C.37 | 0.000116 |
ORF1ab/nsp4 | 233 | V233del1 | Gtt | -tt | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp4 | 233 | V233L | GtT | TtA | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp4 | 233 | V233Y | GTt | TAt | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp4 | 233 | V233X | GTT | TAA | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp4 | 233 | V233I | Gtt | Att | 1 | 1 | P.1.14 | 0.000048 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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