CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 224

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4224G224GG2987GsynggCggT213420920.9803199224-9226
ORF1ab/nsp4224G224GG2987GsynggCggA2134310.01452679224-9226
ORF1ab/nsp4224G224GG2987GsynggCggG2134110.005154649224-9226
ORF1ab/nsp4224G224SG2987SnonsynGgcAgc7737720.9987069224-9226
ORF1ab/nsp4224G224SG2987SnonsynGgCAgT77310.001293669224-9226
ORF1ab/nsp4224G224VG2987VnonsyngGcgTc1331300.9774449224-9226
ORF1ab/nsp4224G224VG2987VnonsyngGCgTG13320.01503769224-9226
ORF1ab/nsp4224G224VG2987VnonsyngGCgTT13310.00751889224-9226
ORF1ab/nsp4224G224delG2987deldelGGC---494919224-9226
ORF1ab/nsp4224G224CG2987CnonsynGgcTgc21200.9523819224-9226
ORF1ab/nsp4224G224CG2987CnonsynGgCTgT2110.0476199224-9226
ORF1ab/nsp4224G224RG2987RnonsynGgcCgc1470.59224-9226
ORF1ab/nsp4224G224RG2987RnonsynGgCCgG1440.2857149224-9226
ORF1ab/nsp4224G224RG2987RnonsynGgCAgG1420.1428579224-9226
ORF1ab/nsp4224G224RG2987RnonsynGgCCgT1410.07142869224-9226
ORF1ab/nsp4224G224LG2987LnonsynGGCCTG720.2857149224-9226
ORF1ab/nsp4224G224LG2987LnonsynGGCTTG720.2857149224-9226
ORF1ab/nsp4224G224LG2987LnonsynGGcCTc720.2857149224-9226
ORF1ab/nsp4224G224LG2987LnonsynGGCCTT710.1428579224-9226
ORF1ab/nsp4224G224DG2987DnonsyngGcgAc6619224-9226
ORF1ab/nsp4224G224AG2987AnonsyngGcgCc2219224-9226
ORF1ab/nsp4224G224WG2987WnonsynGgCTgG2219224-9226
ORF1ab/nsp4224G224FG2987FnonsynGGCTTT210.59224-9226
ORF1ab/nsp4224G224FG2987FnonsynGGcTTc210.59224-9226
ORF1ab/nsp4224G224EG2987EnonsyngGCgAG210.59224-9226
ORF1ab/nsp4224G224EG2987EnonsyngGCgAA210.59224-9226
ORF1ab/nsp4224G224MG2987MnonsynGGCATG1119224-9226
ORF1ab/nsp4224G224IG2987InonsynGGcATc1119224-9226
ORF1ab/nsp4224G224NG2987NnonsynGGcAAc1119224-9226

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4224G224GggCggT20922134All0.0004
ORF1ab/nsp4224G224GggCggA312134All0.000006
ORF1ab/nsp4224G224GggCggG112134All0.000002
ORF1ab/nsp4224G224SGgcAgc772773All0.000148
ORF1ab/nsp4224G224SGgCAgT1773All0
ORF1ab/nsp4224G224GggCggT642642B.1.1.70.000575
ORF1ab/nsp4224G224SGgcAgc184184AY.740.021279
ORF1ab/nsp4224G224SGgcAgc183183B.1.617.20.000689
ORF1ab/nsp4224G224GggCggT159160AY.50.003283
ORF1ab/nsp4224G224GggCggG1160AY.50.000021
ORF1ab/nsp4224G224SGgcAgc152152AY.610.015926
ORF1ab/nsp4224G224GggCggT141141A0.054567
ORF1ab/nsp4224G224VgGcgTc130133All0.000025
ORF1ab/nsp4224G224VgGCgTG2133All0
ORF1ab/nsp4224G224VgGCgTT1133All0
ORF1ab/nsp4224G224GggCggT116116B.1.6310.390572
ORF1ab/nsp4224G224GggCggT9799AY.1030.000602
ORF1ab/nsp4224G224GggCggA299AY.1030.000012
ORF1ab/nsp4224G224GggCggT9899B.1.617.20.000369
ORF1ab/nsp4224G224GggCggA199B.1.617.20.000004
ORF1ab/nsp4224G224GggCggT8288AY.250.000493
ORF1ab/nsp4224G224GggCggA688AY.250.000036
ORF1ab/nsp4224G224GggCggT6063B.10.00055
ORF1ab/nsp4224G224GggCggG263B.10.000018
ORF1ab/nsp4224G224GggCggA163B.10.000009
ORF1ab/nsp4224G224GggCggT6161AY.46.60.004405
ORF1ab/nsp4224G224delGGC---4949All0.000009
ORF1ab/nsp4224G224SGgcAgc4444B.1.1.70.000039
ORF1ab/nsp4224G224GggCggT4141B.1.1770.00054
ORF1ab/nsp4224G224GggCggT4041B.1.20.000352
ORF1ab/nsp4224G224GggCggA141B.1.20.000009
ORF1ab/nsp4224G224GggCggT2639AY.40.00004
ORF1ab/nsp4224G224GggCggA1339AY.40.00002
ORF1ab/nsp4224G224GggCggT3434AY.430.000151
ORF1ab/nsp4224G224VgGcgTc3232B.1.1.70.000029
ORF1ab/nsp4224G224GggCggT2727B.1.177.491
ORF1ab/nsp4224G224GggCggT2626AY.30.000259
ORF1ab/nsp4224G224SGgcAgc2525AY.1030.000155
ORF1ab/nsp4224G224SGgcAgc2525AY.430.000111
ORF1ab/nsp4224G224VgGcgTc2323AY.430.000102
ORF1ab/nsp4224G224GggCggT2222AY.440.000134
ORF1ab/nsp4224G224CGgcTgc2021All0.000004
ORF1ab/nsp4224G224CGgCTgT121All0
ORF1ab/nsp4224G224VgGcgTc2121AY.40.000033
ORF1ab/nsp4224G224GggCggT1717AY.350.003962
ORF1ab/nsp4224G224GggCggT1717AY.46.30.015873
ORF1ab/nsp4224G224GggCggT1617B.1.10.00029
ORF1ab/nsp4224G224GggCggG117B.1.10.000018
ORF1ab/nsp4224G224GggCggT1616AY.390.000395
ORF1ab/nsp4224G224SGgcAgc1616AY.75.10.002885
ORF1ab/nsp4224G224GggCggT1616B.1.1600.000499
ORF1ab/nsp4224G224delGGC---1515B.1.1.70.000013
ORF1ab/nsp4224G224GggCggT1515P.10.000236
ORF1ab/nsp4224G224RGgcCgc714All0.000001
ORF1ab/nsp4224G224RGgCCgG414All0.000001
ORF1ab/nsp4224G224RGgCAgG214All0
ORF1ab/nsp4224G224RGgCCgT114All0
ORF1ab/nsp4224G224SGgcAgc1313AY.40.00002
ORF1ab/nsp4224G224SGgcAgc1313B.10.000119
ORF1ab/nsp4224G224SGgcAgc1212B.1.5750.003641
ORF1ab/nsp4224G224GggCggT1212B.1.5960.001046
ORF1ab/nsp4224G224GggCggT1212Q.10.001516
ORF1ab/nsp4224G224GggCggT1111AY.1100.00124
ORF1ab/nsp4224G224SGgcAgc1010AY.1180.000626
ORF1ab/nsp4224G224SGgcAgc99AY.30.00009
ORF1ab/nsp4224G224SGgcAgc99AY.390.000222
ORF1ab/nsp4224G224GggCggT99AY.4.50.000967
ORF1ab/nsp4224G224GggCggT99B.1.2580.000599
ORF1ab/nsp4224G224VgGcgTc99B.1.258.170.000936
ORF1ab/nsp4224G224SGgcAgc88AY.250.000048
ORF1ab/nsp4224G224GggCggT88B.1.1.10.002614
ORF1ab/nsp4224G224SGgcAgc88B.1.20.00007
ORF1ab/nsp4224G224GggCggT88B.1.2430.000557
ORF1ab/nsp4224G224LGGCCTG27All0
ORF1ab/nsp4224G224LGGCTTG27All0
ORF1ab/nsp4224G224LGGcCTc27All0
ORF1ab/nsp4224G224LGGCCTT17All0
ORF1ab/nsp4224G224GggCggT77AY.1170.000592
ORF1ab/nsp4224G224GggCggT77AY.1190.000247
ORF1ab/nsp4224G224VgGcgTc77B.10.000064
ORF1ab/nsp4224G224GggCggT77B.1.1.5190.000278
ORF1ab/nsp4224G224GggCggT77B.1.3510.000208
ORF1ab/nsp4224G224GggCggG560.277778
ORF1ab/nsp4224G224RGgcCgc260.111111
ORF1ab/nsp4224G224LGGCCTG260.111111
ORF1ab/nsp4224G224LGGcCTc260.111111
ORF1ab/nsp4224G224RGgCCgG260.111111
ORF1ab/nsp4224G224RGgCCgT160.055556
ORF1ab/nsp4224G224LGGCCTT160.055556
ORF1ab/nsp4224G224LGGCTTG160.055556
ORF1ab/nsp4224G224GggCggT160.055556
ORF1ab/nsp4224G224RGgCAgG160.055556
ORF1ab/nsp4224G224DgGcgAc66All0.000001
ORF1ab/nsp4224G224GggCggT66AY.290.000095
ORF1ab/nsp4224G224GggCggT66AY.750.000336
ORF1ab/nsp4224G224GggCggT66B.1.360.000875
ORF1ab/nsp4224G224GggCggT66B.1.466.20.002347
ORF1ab/nsp4224G224GggCggT66B.1.5750.00182
ORF1ab/nsp4224G224VgGCgTG250.111111
ORF1ab/nsp4224G224VgGcgTc250.111111
ORF1ab/nsp4224G224VgGCgTT150.055556
ORF1ab/nsp4224G224GggCggT55AY.1060.001674
ORF1ab/nsp4224G224GggCggT55AY.1200.000186
ORF1ab/nsp4224G224GggCggT55AY.240.002155
ORF1ab/nsp4224G224delGGC---55AY.250.00003
ORF1ab/nsp4224G224GggCggT45AY.260.000113
ORF1ab/nsp4224G224GggCggA15AY.260.000028
ORF1ab/nsp4224G224SGgcAgc55AY.290.000079
ORF1ab/nsp4224G224GggCggT55AY.420.000201
ORF1ab/nsp4224G224SGgcAgc55AY.440.00003
ORF1ab/nsp4224G224GggCggT55B.1.4290.000118
ORF1ab/nsp4224G224GggCggT55B.1.6090.002397
ORF1ab/nsp4224G224GggCggT44AY.1020.000106
ORF1ab/nsp4224G224VgGcgTc44AY.1090.002959
ORF1ab/nsp4224G224GggCggT44AY.340.000388
ORF1ab/nsp4224G224delGGC---44AY.430.000018
ORF1ab/nsp4224G224CGgcTgc44AY.430.000018
ORF1ab/nsp4224G224GggCggT44AY.680.001095
ORF1ab/nsp4224G224CGgcTgc44B.10.000037
ORF1ab/nsp4224G224GggCggT44B.1.36.290.002069
ORF1ab/nsp4224G224VgGcgTc44B.1.4000.001716
ORF1ab/nsp4224G224GggCggT44B.1.4270.000202
ORF1ab/nsp4224G224GggCggT44B.1.5170.001708
ORF1ab/nsp4224G224SGgcAgc44B.1.5560.030075
ORF1ab/nsp4224G224GggCggT44B.1.6370.000292
ORF1ab/nsp4224G224GggCggT44P.1.140.000191
ORF1ab/nsp4224G224GggCggT44Q.40.001819
ORF1ab/nsp4224G224CGgcTgc230.111111
ORF1ab/nsp4224G224CGgCTgT130.055556
ORF1ab/nsp4224G224GggCggT33AY.16.10.00141
ORF1ab/nsp4224G224GggCggT33AY.230.000209
ORF1ab/nsp4224G224SGgcAgc33AY.260.000085
ORF1ab/nsp4224G224GggCggT33AY.370.000948
ORF1ab/nsp4224G224delGGC---33AY.4.50.000322
ORF1ab/nsp4224G224GggCggT33AY.540.000286
ORF1ab/nsp4224G224GggCggT33AY.800.003386
ORF1ab/nsp4224G224SGgcAgc33B.1.258.170.000312
ORF1ab/nsp4224G224VgGcgTc33B.1.4290.000071
ORF1ab/nsp4224G224delGGC---33B.1.617.20.000011
ORF1ab/nsp4224G224GggCggT23C.370.000232
ORF1ab/nsp4224G224GggCggA13C.370.000116
ORF1ab/nsp4224G224WGgCTgG220.111111
ORF1ab/nsp4224G224FGGcTTc120.055556
ORF1ab/nsp4224G224FGGCTTT120.055556
ORF1ab/nsp4224G224GggCggT22A.10.000564
ORF1ab/nsp4224G224AgGcgCc22All0
ORF1ab/nsp4224G224WGgCTgG22All0
ORF1ab/nsp4224G224EgGCgAG12All0
ORF1ab/nsp4224G224FGGcTTc12All0
ORF1ab/nsp4224G224FGGCTTT12All0
ORF1ab/nsp4224G224EgGCgAA12All0
ORF1ab/nsp4224G224SGgcAgc22AY.10.000791
ORF1ab/nsp4224G224GggCggT22AY.1000.000092
ORF1ab/nsp4224G224VgGcgTc22AY.1030.000012
ORF1ab/nsp4224G224GggCggT22AY.1210.000271
ORF1ab/nsp4224G224GggCggT22AY.200.000078
ORF1ab/nsp4224G224CGgcTgc22AY.40.000003
ORF1ab/nsp4224G224GggCggT22AY.4.20.000043
ORF1ab/nsp4224G224GggCggT22AY.480.00093
ORF1ab/nsp4224G224SGgcAgc22AY.480.00093
ORF1ab/nsp4224G224SGgcAgc22AY.5.20.004926
ORF1ab/nsp4224G224GggCggT22AY.530.000575
ORF1ab/nsp4224G224GggCggT22AY.610.00021
ORF1ab/nsp4224G224SGgcAgc22AY.710.00095
ORF1ab/nsp4224G224GggCggT22AY.90.000135
ORF1ab/nsp4224G224GggCggT22AY.9.10.000167
ORF1ab/nsp4224G224GggCggT22AY.930.000546
ORF1ab/nsp4224G224RGgcCgc12B.10.000009
ORF1ab/nsp4224G224EgGCgAA12B.10.000009
ORF1ab/nsp4224G224EgGCgAG12B.10.000009
ORF1ab/nsp4224G224RGgCCgG12B.10.000009
ORF1ab/nsp4224G224SGgcAgc22B.1.10.000036
ORF1ab/nsp4224G224GggCggT22B.1.1.2220.000408
ORF1ab/nsp4224G224GggCggT22B.1.1.2860.005797
ORF1ab/nsp4224G224GggCggT22B.1.1.330.000842
ORF1ab/nsp4224G224GggCggT22B.1.1.4190.014815
ORF1ab/nsp4224G224GggCggA22B.1.1.4200.002012
ORF1ab/nsp4224G224CGgcTgc22B.1.1.70.000002
ORF1ab/nsp4224G224DgGcgAc22B.1.1.70.000002
ORF1ab/nsp4224G224VgGcgTc22B.1.1600.000062
ORF1ab/nsp4224G224SGgcAgc22B.1.1770.000026
ORF1ab/nsp4224G224GggCggT22B.1.177.210.000153
ORF1ab/nsp4224G224GggCggT22B.1.177.40.000422
ORF1ab/nsp4224G224SGgcAgc22B.1.177.50.002484
ORF1ab/nsp4224G224GggCggT22B.1.177.600.000437
ORF1ab/nsp4224G224GggCggG22B.1.2210.000142
ORF1ab/nsp4224G224RGgcCgc12B.1.2210.000071
ORF1ab/nsp4224G224RGgCCgG12B.1.2210.000071
ORF1ab/nsp4224G224GggCggT22B.1.3240.00321
ORF1ab/nsp4224G224SGgcAgc22B.1.3510.000059
ORF1ab/nsp4224G224VgGcgTc22B.1.3510.000059
ORF1ab/nsp4224G224GggCggT22B.1.36.260.005714
ORF1ab/nsp4224G224GggCggT22B.1.3690.00057
ORF1ab/nsp4224G224SGgcAgc22B.1.4270.000101
ORF1ab/nsp4224G224VgGcgTc22B.1.4270.000101
ORF1ab/nsp4224G224CGgcTgc22B.1.466.20.000782
ORF1ab/nsp4224G224GggCggT22B.1.5250.000226
ORF1ab/nsp4224G224GggCggT22B.1.6210.000177
ORF1ab/nsp4224G224SGgcAgc22B.1.6210.000177
ORF1ab/nsp4224G224SGgcAgc22P.10.000032
ORF1ab/nsp4224G224GggCggT22R.10.00018
ORF1ab/nsp4224G224IGGcATc110.055556
ORF1ab/nsp4224G224MGGCATG110.055556
ORF1ab/nsp4224G224SGgcAgc110.055556
ORF1ab/nsp4224G224DgGcgAc11A0.000387
ORF1ab/nsp4224G224GggCggT11A.2.50.000499
ORF1ab/nsp4224G224GggCggT11A.2.5.20.001572
ORF1ab/nsp4224G224MGGCATG11All0
ORF1ab/nsp4224G224IGGcATc11All0
ORF1ab/nsp4224G224NGGcAAc11All0
ORF1ab/nsp4224G224SGgcAgc11AY.100.00053
ORF1ab/nsp4224G224VgGcgTc11AY.1020.000027
ORF1ab/nsp4224G224GggCggT11AY.1070.000466
ORF1ab/nsp4224G224SGgcAgc11AY.1100.000113
ORF1ab/nsp4224G224delGGC---11AY.1200.000037
ORF1ab/nsp4224G224GggCggT11AY.140.000088
ORF1ab/nsp4224G224GggCggT11AY.160.00038
ORF1ab/nsp4224G224SGgcAgc11AY.160.00038
ORF1ab/nsp4224G224SGgcAgc11AY.16.10.00047
ORF1ab/nsp4224G224DgGcgAc11AY.250.000006
ORF1ab/nsp4224G224VgGcgTc11AY.250.000006
ORF1ab/nsp4224G224GggCggT11AY.34.10.00051
ORF1ab/nsp4224G224delGGC---11AY.360.000148
ORF1ab/nsp4224G224CGgcTgc11AY.360.000148
ORF1ab/nsp4224G224LGGCTTG11AY.40.000002
ORF1ab/nsp4224G224GggCggT11AY.4.10.000737
ORF1ab/nsp4224G224SGgcAgc11AY.4.20.000022
ORF1ab/nsp4224G224delGGC---11AY.4.20.000022
ORF1ab/nsp4224G224VgGcgTc11AY.4.20.000022
ORF1ab/nsp4224G224VgGcgTc11AY.420.00004
ORF1ab/nsp4224G224NGGcAAc11AY.440.000006
ORF1ab/nsp4224G224VgGcgTc11AY.450.000122
ORF1ab/nsp4224G224VgGcgTc11AY.460.000104
ORF1ab/nsp4224G224GggCggT11AY.460.000104
ORF1ab/nsp4224G224GggCggT11AY.46.10.001027
ORF1ab/nsp4224G224SGgcAgc11AY.46.20.000635
ORF1ab/nsp4224G224CGgcTgc11AY.46.40.000165
ORF1ab/nsp4224G224GggCggT11AY.46.40.000165
ORF1ab/nsp4224G224GggCggT11AY.470.000031
ORF1ab/nsp4224G224VgGcgTc11AY.50.000021
ORF1ab/nsp4224G224SGgcAgc11AY.540.000095
ORF1ab/nsp4224G224GggCggT11AY.60.000041
ORF1ab/nsp4224G224GggCggT11AY.620.000436
ORF1ab/nsp4224G224delGGC---11AY.740.000116
ORF1ab/nsp4224G224GggCggT11AY.75.10.00018
ORF1ab/nsp4224G224delGGC---11AY.780.001541
ORF1ab/nsp4224G224GggCggT11AY.80.000606
ORF1ab/nsp4224G224GggCggT11AY.850.000427
ORF1ab/nsp4224G224GggCggA11AY.9.20.000037
ORF1ab/nsp4224G224SGgcAgc11AY.9.20.000037
ORF1ab/nsp4224G224GggCggT11AY.920.000287
ORF1ab/nsp4224G224VgGcgTc11AY.980.000079
ORF1ab/nsp4224G224GggCggT11AY.98.10.000048
ORF1ab/nsp4224G224delGGC---11AY.990.001049
ORF1ab/nsp4224G224GggCggT11AY.99.20.000092
ORF1ab/nsp4224G224GggCggA11B0.000128
ORF1ab/nsp4224G224delGGC---11B.10.000009
ORF1ab/nsp4224G224DgGcgAc11B.10.000009
ORF1ab/nsp4224G224AgGcgCc11B.10.000009
ORF1ab/nsp4224G224RGgCAgG11B.1.10.000018
ORF1ab/nsp4224G224VgGcgTc11B.1.10.000018
ORF1ab/nsp4224G224delGGC---11B.1.10.000018
ORF1ab/nsp4224G224GggCggT11B.1.1.1010.01
ORF1ab/nsp4224G224GggCggT11B.1.1.1210.002427
ORF1ab/nsp4224G224delGGC---11B.1.1.1370.0125
ORF1ab/nsp4224G224AgGcgCc11B.1.1.1640.005155
ORF1ab/nsp4224G224GggCggT11B.1.1.1920.002309
ORF1ab/nsp4224G224GggCggT11B.1.1.2070.001182
ORF1ab/nsp4224G224GggCggT11B.1.1.2140.000055
ORF1ab/nsp4224G224GggCggT11B.1.1.2300.009174
ORF1ab/nsp4224G224GggCggT11B.1.1.280.000311
ORF1ab/nsp4224G224GggCggT11B.1.1.2840.000107
ORF1ab/nsp4224G224GggCggT11B.1.1.3030.002762
ORF1ab/nsp4224G224SGgcAgc11B.1.1.3060.000438
ORF1ab/nsp4224G224GggCggT11B.1.1.310.066667
ORF1ab/nsp4224G224GggCggT11B.1.1.3180.000302
ORF1ab/nsp4224G224GggCggT11B.1.1.3540.004386
ORF1ab/nsp4224G224delGGC---11B.1.1.4480.002033
ORF1ab/nsp4224G224VgGcgTc11B.1.1.5190.00004
ORF1ab/nsp4224G224GggCggT11B.1.1.570.011494
ORF1ab/nsp4224G224GggCggT11B.1.1.630.000386
ORF1ab/nsp4224G224GggCggT11B.1.1570.002985
ORF1ab/nsp4224G224GggCggT11B.1.160.80.001289
ORF1ab/nsp4224G224VgGcgTc11B.1.1770.000013
ORF1ab/nsp4224G224delGGC---11B.1.1770.000013
ORF1ab/nsp4224G224SGgcAgc11B.1.177.120.000152
ORF1ab/nsp4224G224GggCggT11B.1.177.320.00135
ORF1ab/nsp4224G224SGgcAgc11B.1.177.40.000211
ORF1ab/nsp4224G224delGGC---11B.1.177.510.004566
ORF1ab/nsp4224G224GggCggT11B.1.177.570.000281
ORF1ab/nsp4224G224GggCggT11B.1.177.730.000566
ORF1ab/nsp4224G224VgGcgTc11B.1.177.860.000183
ORF1ab/nsp4224G224VgGcgTc11B.1.20.000009
ORF1ab/nsp4224G224CGgcTgc11B.1.20.000009
ORF1ab/nsp4224G224VgGcgTc11B.1.2430.00007
ORF1ab/nsp4224G224VgGcgTc11B.1.2580.000067
ORF1ab/nsp4224G224GggCggT11B.1.3200.001245
ORF1ab/nsp4224G224GggCggT11B.1.351.50.0006
ORF1ab/nsp4224G224GggCggT11B.1.36.180.00042
ORF1ab/nsp4224G224delGGC---11B.1.36.290.000517
ORF1ab/nsp4224G224GggCggT11B.1.36.310.001751
ORF1ab/nsp4224G224GggCggT11B.1.36.80.001
ORF1ab/nsp4224G224GggCggT11B.1.3600.012658
ORF1ab/nsp4224G224GggCggT11B.1.3810.007812
ORF1ab/nsp4224G224GggCggT11B.1.4000.000429
ORF1ab/nsp4224G224SGgcAgc11B.1.4150.014286
ORF1ab/nsp4224G224GggCggT11B.1.415.10.007576
ORF1ab/nsp4224G224RGgcCgc11B.1.4290.000024
ORF1ab/nsp4224G224GggCggT11B.1.4620.007246
ORF1ab/nsp4224G224GggCggT11B.1.5160.001957
ORF1ab/nsp4224G224GggCggT11B.1.5880.00091
ORF1ab/nsp4224G224GggCggT11B.1.5950.000261
ORF1ab/nsp4224G224SGgcAgc11B.1.5950.000261
ORF1ab/nsp4224G224GggCggT11B.1.6040.017241
ORF1ab/nsp4224G224GggCggA11B.1.617.10.000129
ORF1ab/nsp4224G224VgGcgTc11B.1.617.20.000004
ORF1ab/nsp4224G224CGgcTgc11B.1.617.20.000004
ORF1ab/nsp4224G224GggCggT11B.1.6200.000946
ORF1ab/nsp4224G224RGgcCgc11B.1.6210.000089
ORF1ab/nsp4224G224delGGC---11B.1.6210.000089
ORF1ab/nsp4224G224GggCggT11B.1.6230.000536
ORF1ab/nsp4224G224SGgcAgc11B.1.6370.000073
ORF1ab/nsp4224G224delGGC---11B.150.017544
ORF1ab/nsp4224G224SGgcAgc11B.390.002331
ORF1ab/nsp4224G224GggCggT11B.40.002208
ORF1ab/nsp4224G224delGGC---11B.4.40.018868
ORF1ab/nsp4224G224SGgcAgc11B.6.60.000889
ORF1ab/nsp4224G224GggCggT11C.10.002392
ORF1ab/nsp4224G224SGgCAgT11C.350.000774
ORF1ab/nsp4224G224DgGcgAc11D.20.000075
ORF1ab/nsp4224G224SGgcAgc11D.20.000075
ORF1ab/nsp4224G224RGgcCgc11D.20.000075
ORF1ab/nsp4224G224delGGC---11P.10.000016
ORF1ab/nsp4224G224delGGC---11P.1.10.000318
ORF1ab/nsp4224G224GggCggT11P.1.40.000977
ORF1ab/nsp4224G224GggCggT11P.20.000187
ORF1ab/nsp4224G224delGGC---11Q.20.000613
ORF1ab/nsp4224G224GggCggT11Q.30.000145
ORF1ab/nsp4224G224VgGcgTc11Q.40.000455
ORF1ab/nsp4224G224SGgcAgc11Q.80.000165
ORF1ab/nsp4224G224GggCggT11Q.80.000165

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.