CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 207

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4207E207EE2970EsyngaAgaG30430419173-9175
ORF1ab/nsp4207E207DE2970DnonsyngaAgaC1091030.9449549173-9175
ORF1ab/nsp4207E207DE2970DnonsyngaAgaT10960.05504599173-9175
ORF1ab/nsp4207E207del1E2970del1delGaa-aa80790.98759173-9175
ORF1ab/nsp4207E207del1E2970del1delgAag-a8010.01259173-9175
ORF1ab/nsp4207E207delE2970deldelGAA---585819173-9175
ORF1ab/nsp4207E207VE2970VnonsyngAagTa252519173-9175
ORF1ab/nsp4207E207GE2970GnonsyngAagGa232319173-9175
ORF1ab/nsp4207E207AE2970AnonsyngAagCa202019173-9175
ORF1ab/nsp4207E207XE2970XnonsynGaaTaa151519173-9175
ORF1ab/nsp4207E207QE2970QnonsynGaaCaa131319173-9175
ORF1ab/nsp4207E207KE2970KnonsynGaaAaa5519173-9175
ORF1ab/nsp4207E207NE2970NnonsynGaAAaC320.6666679173-9175
ORF1ab/nsp4207E207NE2970NnonsynGaAAaT310.3333339173-9175
ORF1ab/nsp4207E207HE2970HnonsynGaACaC2219173-9175

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4207E207EgaAgaG304304All0.000058
ORF1ab/nsp4207E207DgaAgaC103109All0.00002
ORF1ab/nsp4207E207DgaAgaT6109All0.000001
ORF1ab/nsp4207E207del1Gaa-aa7980All0.000015
ORF1ab/nsp4207E207del1gAag-a180All0
ORF1ab/nsp4207E207DgaAgaC7474AY.200.002876
ORF1ab/nsp4207E207del1Gaa-aa6666B.1.1.70.000059
ORF1ab/nsp4207E207delGAA---5858All0.000011
ORF1ab/nsp4207E207EgaAgaG5252B.1.1.70.000047
ORF1ab/nsp4207E207EgaAgaG5151AY.420.002052
ORF1ab/nsp4207E207EgaAgaG5050B.1.258.150.943396
ORF1ab/nsp4207E207VgAagTa2525All0.000005
ORF1ab/nsp4207E207GgAagGa2323All0.000004
ORF1ab/nsp4207E207delGAA---2323B.1.1.70.000021
ORF1ab/nsp4207E207EgaAgaG2121AY.30.000209
ORF1ab/nsp4207E207AgAagCa2020All0.000004
ORF1ab/nsp4207E207VgAagTa1919AY.30.000189
ORF1ab/nsp4207E207EgaAgaG1818B.1.2580.001198
ORF1ab/nsp4207E207EgaAgaG1818B.1.3670.014263
ORF1ab/nsp4207E207XGaaTaa1515All0.000003
ORF1ab/nsp4207E207QGaaCaa1313All0.000002
ORF1ab/nsp4207E207GgAagGa99AY.40.000014
ORF1ab/nsp4207E207EgaAgaG99B.1.617.20.000034
ORF1ab/nsp4207E207AgAagCa77AY.30.00007
ORF1ab/nsp4207E207EgaAgaG77AY.40.000011
ORF1ab/nsp4207E207DgaAgaC460.222222
ORF1ab/nsp4207E207DgaAgaT260.111111
ORF1ab/nsp4207E207AgAagCa66AY.1030.000037
ORF1ab/nsp4207E207EgaAgaG66B0.000767
ORF1ab/nsp4207E207GgAagGa66B.1.1.70.000005
ORF1ab/nsp4207E207KGaaAaa55All0.000001
ORF1ab/nsp4207E207EgaAgaG55AY.1000.00023
ORF1ab/nsp4207E207EgaAgaG55AY.250.00003
ORF1ab/nsp4207E207EgaAgaG55AY.50.000103
ORF1ab/nsp4207E207EgaAgaG44AY.290.000063
ORF1ab/nsp4207E207delGAA---44AY.4.50.00043
ORF1ab/nsp4207E207delGAA---44AY.430.000018
ORF1ab/nsp4207E207XGaaTaa44B.10.000037
ORF1ab/nsp4207E207EgaAgaG44B.10.000037
ORF1ab/nsp4207E207AgAagCa44B.1.1.70.000004
ORF1ab/nsp4207E207delGAA---44B.1.1770.000053
ORF1ab/nsp4207E207DgaAgaC44B.1.20.000035
ORF1ab/nsp4207E207NGaAAaC23All0
ORF1ab/nsp4207E207NGaAAaT13All0
ORF1ab/nsp4207E207EgaAgaG33AY.430.000013
ORF1ab/nsp4207E207DgaAgaC33AY.430.000013
ORF1ab/nsp4207E207QGaaCaa33B.10.000027
ORF1ab/nsp4207E207DgaAgaT23B.1.1.70.000002
ORF1ab/nsp4207E207DgaAgaC13B.1.1.70.000001
ORF1ab/nsp4207E207EgaAgaG33B.1.1770.00004
ORF1ab/nsp4207E207del1Gaa-aa33B.1.177.820.001432
ORF1ab/nsp4207E207del1Gaa-aa33B.1.3510.000089
ORF1ab/nsp4207E207EgaAgaG33B.6.60.002667
ORF1ab/nsp4207E207HGaACaC220.111111
ORF1ab/nsp4207E207EgaAgaG220.111111
ORF1ab/nsp4207E207NGaAAaC220.111111
ORF1ab/nsp4207E207DgaAgaC22A.2.20.003378
ORF1ab/nsp4207E207HGaACaC22All0
ORF1ab/nsp4207E207EgaAgaG22AY.230.000139
ORF1ab/nsp4207E207DgaAgaC12AY.250.000006
ORF1ab/nsp4207E207DgaAgaT12AY.250.000006
ORF1ab/nsp4207E207delGAA---22AY.40.000003
ORF1ab/nsp4207E207del1Gaa-aa22AY.520.001629
ORF1ab/nsp4207E207EgaAgaG22AY.60.000082
ORF1ab/nsp4207E207EgaAgaG22AY.740.000231
ORF1ab/nsp4207E207AgAagCa22B0.000256
ORF1ab/nsp4207E207DgaAgaC22B.1.1.2940.002532
ORF1ab/nsp4207E207QGaaCaa22B.1.1.70.000002
ORF1ab/nsp4207E207del1Gaa-aa22B.1.1600.000062
ORF1ab/nsp4207E207EgaAgaG22B.1.20.000018
ORF1ab/nsp4207E207EgaAgaG22B.1.3510.000059
ORF1ab/nsp4207E207DgaAgaC22B.1.36.290.001035
ORF1ab/nsp4207E207GgAagGa22B.1.4000.000858
ORF1ab/nsp4207E207EgaAgaG22B.1.4270.000101
ORF1ab/nsp4207E207EgaAgaG22B.1.5260.000047
ORF1ab/nsp4207E207EgaAgaG22B.1.6210.000177
ORF1ab/nsp4207E207DgaAgaC22B.1.6280.000705
ORF1ab/nsp4207E207XGaaTaa110.055556
ORF1ab/nsp4207E207GgAagGa110.055556
ORF1ab/nsp4207E207XGaaTaa11A0.000387
ORF1ab/nsp4207E207EgaAgaG11AY.1020.000027
ORF1ab/nsp4207E207DgaAgaC11AY.1030.000006
ORF1ab/nsp4207E207EgaAgaG11AY.1030.000006
ORF1ab/nsp4207E207GgAagGa11AY.1030.000006
ORF1ab/nsp4207E207delGAA---11AY.1200.000037
ORF1ab/nsp4207E207QGaaCaa11AY.140.000088
ORF1ab/nsp4207E207EgaAgaG11AY.200.000039
ORF1ab/nsp4207E207DgaAgaC11AY.260.000028
ORF1ab/nsp4207E207DgaAgaC11AY.290.000016
ORF1ab/nsp4207E207delGAA---11AY.30.00001
ORF1ab/nsp4207E207delGAA---11AY.330.000067
ORF1ab/nsp4207E207EgaAgaG11AY.350.000233
ORF1ab/nsp4207E207EgaAgaG11AY.39.10.00004
ORF1ab/nsp4207E207DgaAgaC11AY.40.000002
ORF1ab/nsp4207E207VgAagTa11AY.40.000002
ORF1ab/nsp4207E207AgAagCa11AY.40.000002
ORF1ab/nsp4207E207VgAagTa11AY.4.20.000022
ORF1ab/nsp4207E207XGaaTaa11AY.430.000004
ORF1ab/nsp4207E207EgaAgaG11AY.440.000006
ORF1ab/nsp4207E207del1gAag-a11AY.440.000006
ORF1ab/nsp4207E207XGaaTaa11AY.470.000031
ORF1ab/nsp4207E207EgaAgaG11AY.650.000533
ORF1ab/nsp4207E207GgAagGa11AY.770.001127
ORF1ab/nsp4207E207delGAA---11AY.780.001541
ORF1ab/nsp4207E207QGaaCaa11AY.80.000606
ORF1ab/nsp4207E207delGAA---11AY.950.000761
ORF1ab/nsp4207E207EgaAgaG11AY.950.000761
ORF1ab/nsp4207E207EgaAgaG11AY.98.10.000048
ORF1ab/nsp4207E207delGAA---11AY.990.001049
ORF1ab/nsp4207E207delGAA---11B0.000128
ORF1ab/nsp4207E207KGaaAaa11B.10.000009
ORF1ab/nsp4207E207delGAA---11B.10.000009
ORF1ab/nsp4207E207delGAA---11B.1.10.000018
ORF1ab/nsp4207E207XGaaTaa11B.1.10.000018
ORF1ab/nsp4207E207DgaAgaC11B.1.10.000018
ORF1ab/nsp4207E207EgaAgaG11B.1.10.000018
ORF1ab/nsp4207E207DgaAgaC11B.1.1.2220.000204
ORF1ab/nsp4207E207XGaaTaa11B.1.1.2530.002506
ORF1ab/nsp4207E207EgaAgaG11B.1.1.280.000311
ORF1ab/nsp4207E207DgaAgaT11B.1.1.3030.002762
ORF1ab/nsp4207E207delGAA---11B.1.1.3060.000438
ORF1ab/nsp4207E207EgaAgaG11B.1.1.3710.010417
ORF1ab/nsp4207E207QGaaCaa11B.1.1.390.00051
ORF1ab/nsp4207E207KGaaAaa11B.1.1.390.00051
ORF1ab/nsp4207E207delGAA---11B.1.1.4090.002833
ORF1ab/nsp4207E207GgAagGa11B.1.1.4340.000349
ORF1ab/nsp4207E207QGaaCaa11B.1.1.5190.00004
ORF1ab/nsp4207E207VgAagTa11B.1.1.70.000001
ORF1ab/nsp4207E207XGaaTaa11B.1.1200.007692
ORF1ab/nsp4207E207EgaAgaG11B.1.1600.000031
ORF1ab/nsp4207E207delGAA---11B.1.1600.000031
ORF1ab/nsp4207E207delGAA---11B.1.1610.017241
ORF1ab/nsp4207E207KGaaAaa11B.1.1770.000013
ORF1ab/nsp4207E207GgAagGa11B.1.1770.000013
ORF1ab/nsp4207E207delGAA---11B.1.177.40.000211
ORF1ab/nsp4207E207del1Gaa-aa11B.1.177.60.000977
ORF1ab/nsp4207E207EgaAgaG11B.1.177.600.000218
ORF1ab/nsp4207E207delGAA---11B.1.177.630.002703
ORF1ab/nsp4207E207GgAagGa11B.1.177.80.000752
ORF1ab/nsp4207E207XGaaTaa11B.1.177.820.000477
ORF1ab/nsp4207E207EgaAgaG11B.1.177.870.000728
ORF1ab/nsp4207E207KGaaAaa11B.1.20.000009
ORF1ab/nsp4207E207QGaaCaa11B.1.20.000009
ORF1ab/nsp4207E207XGaaTaa11B.1.20.000009
ORF1ab/nsp4207E207EgaAgaG11B.1.230.006061
ORF1ab/nsp4207E207EgaAgaG11B.1.2350.002519
ORF1ab/nsp4207E207delGAA---11B.1.2420.018868
ORF1ab/nsp4207E207QGaaCaa11B.1.2430.00007
ORF1ab/nsp4207E207del1Gaa-aa11B.1.36.10.00114
ORF1ab/nsp4207E207delGAA---11B.1.36.180.00042
ORF1ab/nsp4207E207delGAA---11B.1.36.380.001642
ORF1ab/nsp4207E207delGAA---11B.1.4150.014286
ORF1ab/nsp4207E207EgaAgaG11B.1.4290.000024
ORF1ab/nsp4207E207DgaAgaC11B.1.5260.000024
ORF1ab/nsp4207E207EgaAgaG11B.1.5460.003704
ORF1ab/nsp4207E207QGaaCaa11B.1.5750.000303
ORF1ab/nsp4207E207XGaaTaa11B.1.5960.000087
ORF1ab/nsp4207E207DgaAgaC11B.1.617.20.000004
ORF1ab/nsp4207E207delGAA---11B.1.617.20.000004
ORF1ab/nsp4207E207VgAagTa11B.1.617.20.000004
ORF1ab/nsp4207E207EgaAgaG11B.1.940.027027
ORF1ab/nsp4207E207delGAA---11B.150.017544
ORF1ab/nsp4207E207QGaaCaa11B.290.003509
ORF1ab/nsp4207E207NGaAAaT11C.350.000774
ORF1ab/nsp4207E207XGaaTaa11D.20.000075
ORF1ab/nsp4207E207VgAagTa11P.10.000016
ORF1ab/nsp4207E207EgaAgaG11P.10.000016
ORF1ab/nsp4207E207KGaaAaa11P.1.100.000269
ORF1ab/nsp4207E207VgAagTa11P.1.140.000048
ORF1ab/nsp4207E207EgaAgaG11P.1.170.000162
ORF1ab/nsp4207E207del1Gaa-aa11R.10.00009