CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 206

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4206L206LL2969LsynctTctC150113530.9013999170-9172
ORF1ab/nsp4206L206LL2969LsynctTctG1501870.05796149170-9172
ORF1ab/nsp4206L206LL2969LsynctTctA1501610.04063969170-9172
ORF1ab/nsp4206L206FL2969FnonsynCttTtt9769750.9989759170-9172
ORF1ab/nsp4206L206FL2969FnonsynCtTTtC97610.001024599170-9172
ORF1ab/nsp4206L206IL2969InonsynCttAtt32832819170-9172
ORF1ab/nsp4206L206HL2969HnonsyncTtcAt898919170-9172
ORF1ab/nsp4206L206delL2969deldelCTT---565619170-9172
ORF1ab/nsp4206L206PL2969PnonsyncTtcCt40390.9759170-9172
ORF1ab/nsp4206L206PL2969PnonsyncTTcCG4010.0259170-9172
ORF1ab/nsp4206L206RL2969RnonsyncTtcGt37330.8918929170-9172
ORF1ab/nsp4206L206RL2969RnonsyncTTcGG3720.05405419170-9172
ORF1ab/nsp4206L206RL2969RnonsyncTTcGC3720.05405419170-9172
ORF1ab/nsp4206L206CL2969CnonsynCTTTGC530.69170-9172
ORF1ab/nsp4206L206CL2969CnonsynCTtTGt520.49170-9172
ORF1ab/nsp4206L206VL2969VnonsynCttGtt4419170-9172
ORF1ab/nsp4206L206GL2969GnonsynCTtGGt2219170-9172
ORF1ab/nsp4206L206QL2969QnonsyncTTcAA2219170-9172
ORF1ab/nsp4206L206WL2969WnonsynCTTTGG2219170-9172
ORF1ab/nsp4206L206del2L2969del2delcTTc--1119170-9172
ORF1ab/nsp4206L206NL2969NnonsynCTTAAC1119170-9172
ORF1ab/nsp4206L206del1L2969del1delcTtc-t1119170-9172

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4206L206LctTctC13531501All0.000259
ORF1ab/nsp4206L206LctTctG871501All0.000017
ORF1ab/nsp4206L206LctTctA611501All0.000012
ORF1ab/nsp4206L206FCttTtt975976All0.000186
ORF1ab/nsp4206L206FCtTTtC1976All0
ORF1ab/nsp4206L206LctTctC812812B.1.1.2070.959811
ORF1ab/nsp4206L206ICttAtt328328All0.000063
ORF1ab/nsp4206L206FCttTtt272272B.1.1.70.000244
ORF1ab/nsp4206L206LctTctC197197B.1.10.003574
ORF1ab/nsp4206L206ICttAtt156156B.1.1.70.00014
ORF1ab/nsp4206L206FCttTtt113113P.10.00178
ORF1ab/nsp4206L206HcTtcAt8989All0.000017
ORF1ab/nsp4206L206LctTctC8888B.1.1.3440.946237
ORF1ab/nsp4206L206LctTctG5471B.1.617.20.000203
ORF1ab/nsp4206L206LctTctC1571B.1.617.20.000056
ORF1ab/nsp4206L206LctTctA271B.1.617.20.000008
ORF1ab/nsp4206L206FCttTtt6262AY.430.000275
ORF1ab/nsp4206L206FCttTtt6161B.400.022222
ORF1ab/nsp4206L206delCTT---5656All0.000011
ORF1ab/nsp4206L206FCttTtt5656B.1.617.20.000211
ORF1ab/nsp4206L206FCttTtt5151AY.40.000079
ORF1ab/nsp4206L206LctTctC3551B.1.1.70.000031
ORF1ab/nsp4206L206LctTctA951B.1.1.70.000008
ORF1ab/nsp4206L206LctTctG751B.1.1.70.000006
ORF1ab/nsp4206L206HcTtcAt4848B.1.617.20.000181
ORF1ab/nsp4206L206PcTtcCt3940All0.000007
ORF1ab/nsp4206L206PcTTcCG140All0
ORF1ab/nsp4206L206ICttAtt3838AY.30.000378
ORF1ab/nsp4206L206RcTtcGt3337All0.000006
ORF1ab/nsp4206L206RcTTcGC237All0
ORF1ab/nsp4206L206RcTTcGG237All0
ORF1ab/nsp4206L206LctTctC3537AY.40.000054
ORF1ab/nsp4206L206LctTctA237AY.40.000003
ORF1ab/nsp4206L206LctTctA2929B.1.258.170.003015
ORF1ab/nsp4206L206LctTctC2527B.10.000229
ORF1ab/nsp4206L206LctTctA227B.10.000018
ORF1ab/nsp4206L206FCttTtt2626AY.250.000156
ORF1ab/nsp4206L206LctTctC2525AY.60.001028
ORF1ab/nsp4206L206ICttAtt2525AY.980.001975
ORF1ab/nsp4206L206delCTT---2222B.1.1.70.00002
ORF1ab/nsp4206L206LctTctG1121AY.1020.000292
ORF1ab/nsp4206L206LctTctC1021AY.1020.000265
ORF1ab/nsp4206L206HcTtcAt2121AY.430.000093
ORF1ab/nsp4206L206FCttTtt2020AY.46.40.00329
ORF1ab/nsp4206L206FCttTtt2020B.1.20.000176
ORF1ab/nsp4206L206FCttTtt1919AY.1000.000874
ORF1ab/nsp4206L206FCttTtt1717B.1.2060.013866
ORF1ab/nsp4206L206FCttTtt1616AY.270.001036
ORF1ab/nsp4206L206LctTctC815AY.430.000035
ORF1ab/nsp4206L206LctTctG515AY.430.000022
ORF1ab/nsp4206L206LctTctA215AY.430.000009
ORF1ab/nsp4206L206LctTctC1214AY.250.000072
ORF1ab/nsp4206L206LctTctA214AY.250.000012
ORF1ab/nsp4206L206LctTctC1414AY.7.10.001578
ORF1ab/nsp4206L206FCttTtt1313AY.9.10.001088
ORF1ab/nsp4206L206FCttTtt1313B.1.4290.000306
ORF1ab/nsp4206L206PcTtcCt1212B.1.1.70.000011
ORF1ab/nsp4206L206FCttTtt1111AY.30.000109
ORF1ab/nsp4206L206PcTtcCt1111B.1.360.001605
ORF1ab/nsp4206L206ICttAtt1111P.10.000173
ORF1ab/nsp4206L206RcTtcGt6100.333333
ORF1ab/nsp4206L206RcTTcGG2100.111111
ORF1ab/nsp4206L206RcTTcGC2100.111111
ORF1ab/nsp4206L206FCttTtt1010AY.200.000389
ORF1ab/nsp4206L206FCttTtt99AY.1030.000056
ORF1ab/nsp4206L206ICttAtt99B.1.617.20.000034
ORF1ab/nsp4206L206FCttTtt88AY.1020.000212
ORF1ab/nsp4206L206FCttTtt88AY.120.10.002568
ORF1ab/nsp4206L206FCttTtt88AY.260.000226
ORF1ab/nsp4206L206FCttTtt88B.1.1.5190.000318
ORF1ab/nsp4206L206FCttTtt77A.2.50.003493
ORF1ab/nsp4206L206FCttTtt77AY.1190.000247
ORF1ab/nsp4206L206FCttTtt77AY.390.000173
ORF1ab/nsp4206L206ICttAtt77AY.440.000043
ORF1ab/nsp4206L206FCttTtt77B.1.3510.000208
ORF1ab/nsp4206L206ICttAtt66AY.40.000009
ORF1ab/nsp4206L206LctTctC56AY.440.00003
ORF1ab/nsp4206L206LctTctA16AY.440.000006
ORF1ab/nsp4206L206FCttTtt66AY.98.10.000291
ORF1ab/nsp4206L206LctTctC66B.1.1.1890.009077
ORF1ab/nsp4206L206ICttAtt66B.1.36.310.010508
ORF1ab/nsp4206L206CCTTTGC35All0.000001
ORF1ab/nsp4206L206CCTtTGt25All0
ORF1ab/nsp4206L206RcTtcGt55AY.250.00003
ORF1ab/nsp4206L206FCttTtt55AY.290.000079
ORF1ab/nsp4206L206HcTtcAt55AY.440.00003
ORF1ab/nsp4206L206LctTctC45AY.50.000083
ORF1ab/nsp4206L206LctTctA15AY.50.000021
ORF1ab/nsp4206L206FCttTtt55AY.620.002179
ORF1ab/nsp4206L206FCttTtt55B.10.000046
ORF1ab/nsp4206L206LctTctC55B.1.20.000044
ORF1ab/nsp4206L206ICttAtt55B.1.3510.000149
ORF1ab/nsp4206L206CCTtTGt240.111111
ORF1ab/nsp4206L206CCTTTGC240.111111
ORF1ab/nsp4206L206VCttGtt44All0.000001
ORF1ab/nsp4206L206ICttAtt44AY.1020.000106
ORF1ab/nsp4206L206ICttAtt44AY.250.000024
ORF1ab/nsp4206L206ICttAtt44AY.4.40.001637
ORF1ab/nsp4206L206delCTT---44AY.4.50.00043
ORF1ab/nsp4206L206delCTT---44AY.430.000018
ORF1ab/nsp4206L206FCttTtt44AY.440.000024
ORF1ab/nsp4206L206LctTctA44B.1.1.3170.001647
ORF1ab/nsp4206L206delCTT---44B.1.1770.000053
ORF1ab/nsp4206L206ICttAtt44B.1.36.290.002069
ORF1ab/nsp4206L206FCttTtt44B.1.5260.000094
ORF1ab/nsp4206L206LctTctC44B.1.6090.001918
ORF1ab/nsp4206L206RcTtcGt44B.1.617.20.000015
ORF1ab/nsp4206L206LctTctC23AY.1030.000012
ORF1ab/nsp4206L206LctTctG13AY.1030.000006
ORF1ab/nsp4206L206FCttTtt33AY.120.2.10.001495
ORF1ab/nsp4206L206FCttTtt33AY.140.000264
ORF1ab/nsp4206L206LctTctC33AY.230.000209
ORF1ab/nsp4206L206LctTctC33AY.260.000085
ORF1ab/nsp4206L206FCttTtt33AY.4.20.000065
ORF1ab/nsp4206L206RcTtcGt33AY.4.20.000065
ORF1ab/nsp4206L206FCttTtt33AY.420.000121
ORF1ab/nsp4206L206LctTctC33AY.46.60.000217
ORF1ab/nsp4206L206FCttTtt33AY.50.000062
ORF1ab/nsp4206L206LctTctC33AY.700.000626
ORF1ab/nsp4206L206ICttAtt33AY.930.000819
ORF1ab/nsp4206L206FCttTtt33AY.99.20.000276
ORF1ab/nsp4206L206PcTtcCt33B.10.000027
ORF1ab/nsp4206L206ICttAtt33B.10.000027
ORF1ab/nsp4206L206LctTctC33B.1.1.5190.000119
ORF1ab/nsp4206L206ICttAtt33B.1.214.20.001799
ORF1ab/nsp4206L206LctTctC23B.1.2430.000139
ORF1ab/nsp4206L206LctTctA13B.1.2430.00007
ORF1ab/nsp4206L206FCttTtt33B.1.438.10.000322
ORF1ab/nsp4206L206RcTtcGt33B.1.5240.004219
ORF1ab/nsp4206L206LctTctC33B.1.5960.000261
ORF1ab/nsp4206L206PcTtcCt33B.1.617.20.000011
ORF1ab/nsp4206L206FCttTtt33B.1.6280.001057
ORF1ab/nsp4206L206ICttAtt33P.1.10.000953
ORF1ab/nsp4206L206FCttTtt33P.1.150.000697
ORF1ab/nsp4206L206ICttAtt33P.1.170.000485
ORF1ab/nsp4206L206WCTTTGG220.111111
ORF1ab/nsp4206L206QcTTcAA220.111111
ORF1ab/nsp4206L206GCTtGGt220.111111
ORF1ab/nsp4206L206VCttGtt220.111111
ORF1ab/nsp4206L206WCTTTGG22All0
ORF1ab/nsp4206L206QcTTcAA22All0
ORF1ab/nsp4206L206GCTtGGt22All0
ORF1ab/nsp4206L206FCttTtt22AY.10.000791
ORF1ab/nsp4206L206LctTctG22AY.1100.000225
ORF1ab/nsp4206L206LctTctG22AY.1160.000574
ORF1ab/nsp4206L206ICttAtt22AY.1170.000169
ORF1ab/nsp4206L206FCttTtt22AY.1180.000125
ORF1ab/nsp4206L206FCttTtt22AY.1200.000074
ORF1ab/nsp4206L206ICttAtt22AY.1200.000074
ORF1ab/nsp4206L206LctTctC22AY.16.10.00094
ORF1ab/nsp4206L206ICttAtt22AY.39.10.000079
ORF1ab/nsp4206L206RcTtcGt22AY.40.000003
ORF1ab/nsp4206L206delCTT---22AY.40.000003
ORF1ab/nsp4206L206PcTtcCt22AY.4.10.001475
ORF1ab/nsp4206L206LctTctC22AY.4.20.000043
ORF1ab/nsp4206L206FCttTtt22AY.4.2.10.000298
ORF1ab/nsp4206L206FCttTtt22AY.4.50.000215
ORF1ab/nsp4206L206LctTctG22AY.450.000243
ORF1ab/nsp4206L206HcTtcAt22AY.590.001059
ORF1ab/nsp4206L206LctTctC22AY.840.000875
ORF1ab/nsp4206L206FCttTtt22B0.000256
ORF1ab/nsp4206L206LctTctC22B.1.1.4100.074074
ORF1ab/nsp4206L206ICttAtt22B.1.1.5190.000079
ORF1ab/nsp4206L206HcTtcAt22B.1.1.540.006042
ORF1ab/nsp4206L206HcTtcAt22B.1.1.70.000002
ORF1ab/nsp4206L206FCttTtt22B.1.1600.000062
ORF1ab/nsp4206L206FCttTtt22B.1.1770.000026
ORF1ab/nsp4206L206FCttTtt22B.1.177.210.000153
ORF1ab/nsp4206L206FCttTtt22B.1.177.620.002384
ORF1ab/nsp4206L206FCttTtt22B.1.177.750.002081
ORF1ab/nsp4206L206LctTctC22B.1.177.860.000367
ORF1ab/nsp4206L206RcTtcGt22B.1.3510.000059
ORF1ab/nsp4206L206FCttTtt22B.1.36.170.000988
ORF1ab/nsp4206L206FCttTtt22B.1.4270.000101
ORF1ab/nsp4206L206ICttAtt22B.1.466.20.000782
ORF1ab/nsp4206L206FCttTtt22B.1.5750.000607
ORF1ab/nsp4206L206ICttAtt22B.1.5960.000174
ORF1ab/nsp4206L206FCttTtt22P.1.140.000096
ORF1ab/nsp4206L206ICttAtt22P.1.160.000748
ORF1ab/nsp4206L206RcTtcGt22Q.30.00029
ORF1ab/nsp4206L206PcTtcCt110.055556
ORF1ab/nsp4206L206del1cTtc-t11All0
ORF1ab/nsp4206L206NCTTAAC11All0
ORF1ab/nsp4206L206del2cTTc--11All0
ORF1ab/nsp4206L206LctTctA11AT.10.005128
ORF1ab/nsp4206L206LctTctC11AY.100.00053
ORF1ab/nsp4206L206VCttGtt11AY.1000.000046
ORF1ab/nsp4206L206HcTtcAt11AY.1020.000027
ORF1ab/nsp4206L206ICttAtt11AY.1030.000006
ORF1ab/nsp4206L206FCttTtt11AY.1060.000335
ORF1ab/nsp4206L206LctTctC11AY.1170.000085
ORF1ab/nsp4206L206PcTtcCt11AY.1180.000063
ORF1ab/nsp4206L206HcTtcAt11AY.1180.000063
ORF1ab/nsp4206L206ICttAtt11AY.1180.000063
ORF1ab/nsp4206L206ICttAtt11AY.1190.000035
ORF1ab/nsp4206L206HcTtcAt11AY.120.000316
ORF1ab/nsp4206L206delCTT---11AY.1200.000037
ORF1ab/nsp4206L206FCttTtt11AY.1210.000135
ORF1ab/nsp4206L206FCttTtt11AY.16.10.00047
ORF1ab/nsp4206L206LctTctC11AY.200.000039
ORF1ab/nsp4206L206FCttTtt11AY.230.00007
ORF1ab/nsp4206L206PcTtcCt11AY.23.10.000417
ORF1ab/nsp4206L206RcTtcGt11AY.240.000431
ORF1ab/nsp4206L206ICttAtt11AY.260.000028
ORF1ab/nsp4206L206LctTctC11AY.270.000065
ORF1ab/nsp4206L206LctTctG11AY.290.000016
ORF1ab/nsp4206L206ICttAtt11AY.290.000016
ORF1ab/nsp4206L206PcTtcCt11AY.30.00001
ORF1ab/nsp4206L206delCTT---11AY.30.00001
ORF1ab/nsp4206L206LctTctC11AY.30.00001
ORF1ab/nsp4206L206ICttAtt11AY.300.000396
ORF1ab/nsp4206L206delCTT---11AY.330.000067
ORF1ab/nsp4206L206HcTtcAt11AY.34.10.00051
ORF1ab/nsp4206L206ICttAtt11AY.370.000316
ORF1ab/nsp4206L206HcTtcAt11AY.390.000025
ORF1ab/nsp4206L206LctTctC11AY.4.2.10.000149
ORF1ab/nsp4206L206LctTctG11AY.420.00004
ORF1ab/nsp4206L206ICttAtt11AY.430.000004
ORF1ab/nsp4206L206PcTtcCt11AY.430.000004
ORF1ab/nsp4206L206FCttTtt11AY.450.000122
ORF1ab/nsp4206L206FCttTtt11AY.46.60.000072
ORF1ab/nsp4206L206LctTctC11AY.470.000031
ORF1ab/nsp4206L206FCttTtt11AY.480.000465
ORF1ab/nsp4206L206FCttTtt11AY.5.30.000337
ORF1ab/nsp4206L206FCttTtt11AY.540.000095
ORF1ab/nsp4206L206FCttTtt11AY.560.001605
ORF1ab/nsp4206L206FCttTtt11AY.60.000041
ORF1ab/nsp4206L206ICttAtt11AY.620.000436
ORF1ab/nsp4206L206HcTtcAt11AY.670.000464
ORF1ab/nsp4206L206FCttTtt11AY.70.000196
ORF1ab/nsp4206L206FCttTtt11AY.710.000475
ORF1ab/nsp4206L206LctTctC11AY.750.000056
ORF1ab/nsp4206L206LctTctC11AY.75.10.00018
ORF1ab/nsp4206L206delCTT---11AY.780.001541
ORF1ab/nsp4206L206FCttTtt11AY.840.000437
ORF1ab/nsp4206L206HcTtcAt11AY.880.000884
ORF1ab/nsp4206L206ICttAtt11AY.90.000068
ORF1ab/nsp4206L206FCttTtt11AY.90.000068
ORF1ab/nsp4206L206delCTT---11AY.950.000761
ORF1ab/nsp4206L206HcTtcAt11AY.990.001049
ORF1ab/nsp4206L206delCTT---11AY.990.001049
ORF1ab/nsp4206L206LctTctC11B0.000128
ORF1ab/nsp4206L206del1cTtc-t11B.10.000009
ORF1ab/nsp4206L206RcTtcGt11B.10.000009
ORF1ab/nsp4206L206delCTT---11B.10.000009
ORF1ab/nsp4206L206PcTTcCG11B.1.10.000018
ORF1ab/nsp4206L206CCTTTGC11B.1.10.000018
ORF1ab/nsp4206L206ICttAtt11B.1.10.000018
ORF1ab/nsp4206L206delCTT---11B.1.10.000018
ORF1ab/nsp4206L206FCttTtt11B.1.10.000018
ORF1ab/nsp4206L206LctTctA11B.1.1.10.000327
ORF1ab/nsp4206L206LctTctG11B.1.1.1940.00495
ORF1ab/nsp4206L206LctTctC11B.1.1.2050.003717
ORF1ab/nsp4206L206FCtTTtC11B.1.1.2070.001182
ORF1ab/nsp4206L206FCttTtt11B.1.1.2140.000055
ORF1ab/nsp4206L206FCttTtt11B.1.1.2530.002506
ORF1ab/nsp4206L206FCttTtt11B.1.1.2840.000107
ORF1ab/nsp4206L206delCTT---11B.1.1.3060.000438
ORF1ab/nsp4206L206FCttTtt11B.1.1.3160.000925
ORF1ab/nsp4206L206LctTctA11B.1.1.3980.003226
ORF1ab/nsp4206L206delCTT---11B.1.1.4090.002833
ORF1ab/nsp4206L206FCttTtt11B.1.1.4340.000349
ORF1ab/nsp4206L206del2cTTc--11B.1.1.70.000001
ORF1ab/nsp4206L206ICttAtt11B.1.1600.000031
ORF1ab/nsp4206L206delCTT---11B.1.1600.000031
ORF1ab/nsp4206L206delCTT---11B.1.1610.017241
ORF1ab/nsp4206L206LctTctC11B.1.1770.000013
ORF1ab/nsp4206L206delCTT---11B.1.177.40.000211
ORF1ab/nsp4206L206FCttTtt11B.1.177.570.000281
ORF1ab/nsp4206L206delCTT---11B.1.177.630.002703
ORF1ab/nsp4206L206LctTctC11B.1.177.810.000189
ORF1ab/nsp4206L206ICttAtt11B.1.177.870.000728
ORF1ab/nsp4206L206RcTtcGt11B.1.177.870.000728
ORF1ab/nsp4206L206ICttAtt11B.1.20.000009
ORF1ab/nsp4206L206RcTtcGt11B.1.20.000009
ORF1ab/nsp4206L206LctTctC11B.1.2100.002132
ORF1ab/nsp4206L206ICttAtt11B.1.2140.003663
ORF1ab/nsp4206L206FCttTtt11B.1.2210.000071
ORF1ab/nsp4206L206FCttTtt11B.1.2340.000132
ORF1ab/nsp4206L206delCTT---11B.1.2420.018868
ORF1ab/nsp4206L206FCttTtt11B.1.2430.00007
ORF1ab/nsp4206L206ICttAtt11B.1.2580.000067
ORF1ab/nsp4206L206FCttTtt11B.1.258.170.000104
ORF1ab/nsp4206L206PcTtcCt11B.1.2600.003344
ORF1ab/nsp4206L206FCttTtt11B.1.2790.000514
ORF1ab/nsp4206L206FCttTtt11B.1.3060.005714
ORF1ab/nsp4206L206FCttTtt11B.1.3360.002439
ORF1ab/nsp4206L206ICttAtt11B.1.3490.000715
ORF1ab/nsp4206L206FCttTtt11B.1.360.000146
ORF1ab/nsp4206L206LctTctC11B.1.36.160.001425
ORF1ab/nsp4206L206delCTT---11B.1.36.180.00042
ORF1ab/nsp4206L206FCttTtt11B.1.36.310.001751
ORF1ab/nsp4206L206delCTT---11B.1.36.380.001642
ORF1ab/nsp4206L206LctTctC11B.1.3960.000706
ORF1ab/nsp4206L206ICttAtt11B.1.3960.000706
ORF1ab/nsp4206L206FCttTtt11B.1.4000.000429
ORF1ab/nsp4206L206HcTtcAt11B.1.4130.004255
ORF1ab/nsp4206L206delCTT---11B.1.4150.014286
ORF1ab/nsp4206L206LctTctA11B.1.4270.00005
ORF1ab/nsp4206L206ICttAtt11B.1.4290.000024
ORF1ab/nsp4206L206LctTctC11B.1.4290.000024
ORF1ab/nsp4206L206RcTtcGt11B.1.5680.001111
ORF1ab/nsp4206L206LctTctC11B.1.5750.000303
ORF1ab/nsp4206L206delCTT---11B.1.617.20.000004
ORF1ab/nsp4206L206VCttGtt11B.1.617.20.000004
ORF1ab/nsp4206L206FCttTtt11B.1.6210.000089
ORF1ab/nsp4206L206LctTctC11B.1.6210.000089
ORF1ab/nsp4206L206FCttTtt11B.1.6370.000073
ORF1ab/nsp4206L206PcTtcCt11B.1.6370.000073
ORF1ab/nsp4206L206delCTT---11B.150.017544
ORF1ab/nsp4206L206NCTTAAC11C.350.000774
ORF1ab/nsp4206L206LctTctA11C.350.000774
ORF1ab/nsp4206L206RcTtcGt11C.36.3.10.002717
ORF1ab/nsp4206L206FCttTtt11D.20.000075
ORF1ab/nsp4206L206FCttTtt11P.1.100.000269
ORF1ab/nsp4206L206LctTctC11P.1.150.000232
ORF1ab/nsp4206L206FCttTtt11P.1.170.000162
ORF1ab/nsp4206L206LctTctA11P.1.17.10.000875
ORF1ab/nsp4206L206LctTctC11P.20.000187
ORF1ab/nsp4206L206FCttTtt11P.30.001595
ORF1ab/nsp4206L206ICttAtt11Q.10.000126
ORF1ab/nsp4206L206FCttTtt11Q.10.000126
ORF1ab/nsp4206L206PcTtcCt11Q.30.000145
ORF1ab/nsp4206L206FCttTtt11Q.70.001111

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.