CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 204 & Codon = aTc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4204T204IT2967InonsynaCcaTc15310153040.9996089164-9166

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4204T204IaCcaTc1530415310All0.002927
ORF1ab/nsp4204T204IaCcaTc61016102AY.1130.868717
ORF1ab/nsp4204T204IaCcaTc13291329AY.40.002068
ORF1ab/nsp4204T204IaCcaTc11171117AY.39.1.10.80942
ORF1ab/nsp4204T204IaCcaTc586586B.1.1.70.000525
ORF1ab/nsp4204T204IaCcaTc570570AY.1030.003539
ORF1ab/nsp4204T204IaCcaTc466468B.1.20.004103
ORF1ab/nsp4204T204IaCcaTc380380AY.440.002313
ORF1ab/nsp4204T204IaCcaTc376377B.1.617.20.001416
ORF1ab/nsp4204T204IaCcaTc339339AY.3.10.028903
ORF1ab/nsp4204T204IaCcaTc306306AY.250.001841
ORF1ab/nsp4204T204IaCcaTc250250AY.390.006178
ORF1ab/nsp4204T204IaCcaTc244244AY.430.001081
ORF1ab/nsp4204T204IaCcaTc202202AY.30.002009
ORF1ab/nsp4204T204IaCcaTc144144B.1.1600.004491
ORF1ab/nsp4204T204IaCcaTc144144P.20.026876
ORF1ab/nsp4204T204IaCcaTc131131P.10.002064
ORF1ab/nsp4204T204IaCcaTc118118B.10.001081
ORF1ab/nsp4204T204IaCcaTc114114B.1.1770.001501
ORF1ab/nsp4204T204IaCcaTc7676AY.4.20.001648
ORF1ab/nsp4204T204IaCcaTc7575AY.200.002915
ORF1ab/nsp4204T204IaCcaTc7373AY.260.002067
ORF1ab/nsp4204T204IaCcaTc6767R.10.006031
ORF1ab/nsp4204T204IaCcaTc6464B.1.3510.001902
ORF1ab/nsp4204T204IaCcaTc6161AY.750.003417
ORF1ab/nsp4204T204IaCcaTc6060AY.50.001239
ORF1ab/nsp4204T204IaCcaTc5858B.1.4290.001365
ORF1ab/nsp4204T204IaCcaTc5858B.1.5260.001363
ORF1ab/nsp4204T204IaCcaTc5757AY.1020.001511
ORF1ab/nsp4204T204IaCcaTc5757AY.290.000899
ORF1ab/nsp4204T204IaCcaTc5454AY.1190.001907
ORF1ab/nsp4204T204IaCcaTc5253AY.470.001617
ORF1ab/nsp4204T204IaCcaTc5151B.1.6370.003727
ORF1ab/nsp4204T204IaCcaTc5050AY.140.004401
ORF1ab/nsp4204T204IaCcaTc4949B.1.177.600.010703
ORF1ab/nsp4204T204IaCcaTc4343AY.230.002999
ORF1ab/nsp4204T204IaCcaTc3940AY.540.003719
ORF1ab/nsp4204T204IaCcaTc4040B.1.10.000726
ORF1ab/nsp4204T204IaCcaTc3838AY.1170.003212
ORF1ab/nsp4204T204IaCcaTc3838B.1.5960.003311
ORF1ab/nsp4204T204IaCcaTc3333AY.370.01043
ORF1ab/nsp4204T204IaCcaTc3030AY.1000.00138
ORF1ab/nsp4204T204IaCcaTc3030B.1.1490.10274
ORF1ab/nsp4204T204IaCcaTc2929AY.360.004298
ORF1ab/nsp4204T204IaCcaTc2929B.1.2430.002018
ORF1ab/nsp4204T204IaCcaTc2828B.1.4270.001414
ORF1ab/nsp4204T204IaCcaTc2525AY.46.60.001805
ORF1ab/nsp4204T204IaCcaTc2424AY.1180.001504
ORF1ab/nsp4204T204IaCcaTc2424AY.99.20.002212
ORF1ab/nsp4204T204IaCcaTc2222B.1.4970.006925
ORF1ab/nsp4204T204IaCcaTc2121AY.7.10.002367
ORF1ab/nsp4204T204IaCcaTc2121B.1.5770.014433
ORF1ab/nsp4204T204IaCcaTc2020AY.340.001939
ORF1ab/nsp4204T204IaCcaTc1818AY.39.10.000713
ORF1ab/nsp4204T204IaCcaTc1818AY.420.000724
ORF1ab/nsp4204T204IaCcaTc1717AY.330.001135
ORF1ab/nsp4204T204IaCcaTc1717AY.9.20.000624
ORF1ab/nsp4204T204IaCcaTc1717B.1.3960.011997
ORF1ab/nsp4204T204IaCcaTc1616B.1.2210.001137
ORF1ab/nsp4204T204IaCcaTc1515AY.1200.000558
ORF1ab/nsp4204T204IaCcaTc1515AY.46.40.002468
ORF1ab/nsp4204T204IaCcaTc1515C.36.30.008508
ORF1ab/nsp4204T204IaCcaTc1414AY.850.00598
ORF1ab/nsp4204T204IaCcaTc1414B.1.5750.004248
ORF1ab/nsp4204T204IaCcaTc1313B.1.6210.001151
ORF1ab/nsp4204T204IaCcaTc1111AY.20.003917
ORF1ab/nsp4204T204IaCcaTc1111B.1.1.5190.000437
ORF1ab/nsp4204T204IaCcaTc1010AY.4.50.001075
ORF1ab/nsp4204T204IaCcaTc1010AY.46.50.001984
ORF1ab/nsp4204T204IaCcaTc1010AY.75.10.001803
ORF1ab/nsp4204T204IaCcaTc1010AY.840.004374
ORF1ab/nsp4204T204IaCcaTc1010B0.001278
ORF1ab/nsp4204T204IaCcaTc1010B.1.1.3170.004117
ORF1ab/nsp4204T204IaCcaTc1010B.1.2410.008117
ORF1ab/nsp4204T204IaCcaTc1010B.1.2580.000665
ORF1ab/nsp4204T204IaCcaTc1010B.1.466.20.003912
ORF1ab/nsp4204T204IaCcaTc99AY.450.001095
ORF1ab/nsp4204T204IaCcaTc99AY.610.000943
ORF1ab/nsp4204T204IaCcaTc99AY.980.000711
ORF1ab/nsp4204T204IaCcaTc99AY.98.10.000436
ORF1ab/nsp4204T204IaCcaTc99B.1.1.2980.007759
ORF1ab/nsp4204T204IaCcaTc99B.1.1.3180.002716
ORF1ab/nsp4204T204IaCcaTc99P.1.140.00043
ORF1ab/nsp4204T204IaCcaTc99P.1.170.001456
ORF1ab/nsp4204T204IaCcaTc88B.1.617.10.001032
ORF1ab/nsp4204T204IaCcaTc88C.370.000929
ORF1ab/nsp4204T204IaCcaTc77AY.1110.001282
ORF1ab/nsp4204T204IaCcaTc77AY.350.001631
ORF1ab/nsp4204T204IaCcaTc77B.1.1.280.002179
ORF1ab/nsp4204T204IaCcaTc66AY.460.000624
ORF1ab/nsp4204T204IaCcaTc66AY.590.003178
ORF1ab/nsp4204T204IaCcaTc66AY.60.000247
ORF1ab/nsp4204T204IaCcaTc66AY.830.010345
ORF1ab/nsp4204T204IaCcaTc66AY.860.004979
ORF1ab/nsp4204T204IaCcaTc66B.1.1.2140.000333
ORF1ab/nsp4204T204IaCcaTc66B.1.3690.001711
ORF1ab/nsp4204T204IaCcaTc66B.1.930.005602
ORF1ab/nsp4204T204IaCcaTc55A.10.001409
ORF1ab/nsp4204T204IaCcaTc55AY.1160.001434
ORF1ab/nsp4204T204IaCcaTc55AY.1210.000677
ORF1ab/nsp4204T204IaCcaTc55AY.320.002662
ORF1ab/nsp4204T204IaCcaTc55AY.5.30.001687
ORF1ab/nsp4204T204IaCcaTc55AY.5.40.001384
ORF1ab/nsp4204T204IaCcaTc55AY.630.001934
ORF1ab/nsp4204T204IaCcaTc55AY.670.002321
ORF1ab/nsp4204T204IaCcaTc55AY.690.000933
ORF1ab/nsp4204T204IaCcaTc55AY.700.001043
ORF1ab/nsp4204T204IaCcaTc55AY.710.002375
ORF1ab/nsp4204T204IaCcaTc55AY.90.000338
ORF1ab/nsp4204T204IaCcaTc55AY.910.003652
ORF1ab/nsp4204T204IaCcaTc55B.1.1.700.001705
ORF1ab/nsp4204T204IaCcaTc55B.1.258.110.001982
ORF1ab/nsp4204T204IaCcaTc55B.1.258.170.00052
ORF1ab/nsp4204T204IaCcaTc55B.1.36.310.008757
ORF1ab/nsp4204T204IaCcaTc55B.1.5610.001985
ORF1ab/nsp4204T204IaCcaTc55B.400.001821
ORF1ab/nsp4204T204IaCcaTc55D.20.000375
ORF1ab/nsp4204T204IaCcaTc55P.1.70.001596
ORF1ab/nsp4204T204IaCcaTc55P.30.007974
ORF1ab/nsp4204T204IaCcaTc44AY.1050.002572
ORF1ab/nsp4204T204IaCcaTc44AY.1060.00134
ORF1ab/nsp4204T204IaCcaTc44AY.550.00367
ORF1ab/nsp4204T204IaCcaTc44AY.660.004278
ORF1ab/nsp4204T204IaCcaTc44AY.740.000463
ORF1ab/nsp4204T204IaCcaTc44AY.9.10.000335
ORF1ab/nsp4204T204IaCcaTc44AY.940.001771
ORF1ab/nsp4204T204IaCcaTc44B.1.1.330.001684
ORF1ab/nsp4204T204IaCcaTc44B.1.1.4200.004024
ORF1ab/nsp4204T204IaCcaTc44B.1.1.4640.005891
ORF1ab/nsp4204T204IaCcaTc44B.1.4000.001716
ORF1ab/nsp4204T204IaCcaTc44B.1.4090.003125
ORF1ab/nsp4204T204IaCcaTc44B.1.438.10.000429
ORF1ab/nsp4204T204IaCcaTc44B.1.4700.005618
ORF1ab/nsp4204T204IaCcaTc44B.1.5950.001044
ORF1ab/nsp4204T204IaCcaTc33AY.1080.003308
ORF1ab/nsp4204T204IaCcaTc33AY.160.001139
ORF1ab/nsp4204T204IaCcaTc33AY.380.001498
ORF1ab/nsp4204T204IaCcaTc33AY.4.40.001227
ORF1ab/nsp4204T204IaCcaTc33AY.920.000862
ORF1ab/nsp4204T204IaCcaTc33B.1.1.10.00098
ORF1ab/nsp4204T204IaCcaTc33B.1.1.3770.004144
ORF1ab/nsp4204T204IaCcaTc33B.1.1.4120.022901
ORF1ab/nsp4204T204IaCcaTc33B.1.1.5260.010638
ORF1ab/nsp4204T204IaCcaTc33B.1.2400.000647
ORF1ab/nsp4204T204IaCcaTc33B.1.258.140.002941
ORF1ab/nsp4204T204IaCcaTc33B.1.3200.003736
ORF1ab/nsp4204T204IaCcaTc33B.1.390.011719
ORF1ab/nsp4204T204IaCcaTc33B.1.5250.000339
ORF1ab/nsp4204T204IaCcaTc33B.1.5880.00273
ORF1ab/nsp4204T204IaCcaTc33B.60.00273
ORF1ab/nsp4204T204IaCcaTc33C.80.013393
ORF1ab/nsp4204T204IaCcaTc220.111111
ORF1ab/nsp4204T204IaCcaTc22A.23.10.001408
ORF1ab/nsp4204T204IaCcaTc22AY.100.00106
ORF1ab/nsp4204T204IaCcaTc22AY.1010.000981
ORF1ab/nsp4204T204IaCcaTc22AY.1070.000932
ORF1ab/nsp4204T204IaCcaTc22AY.1100.000225
ORF1ab/nsp4204T204IaCcaTc22AY.130.000322
ORF1ab/nsp4204T204IaCcaTc22AY.270.000129
ORF1ab/nsp4204T204IaCcaTc22AY.29.10.000441
ORF1ab/nsp4204T204IaCcaTc22AY.300.000791
ORF1ab/nsp4204T204IaCcaTc22AY.4.30.001684
ORF1ab/nsp4204T204IaCcaTc22AY.410.000588
ORF1ab/nsp4204T204IaCcaTc22AY.46.20.001271
ORF1ab/nsp4204T204IaCcaTc22AY.520.001629
ORF1ab/nsp4204T204IaCcaTc22AY.560.00321
ORF1ab/nsp4204T204IaCcaTc22AY.580.001815
ORF1ab/nsp4204T204IaCcaTc22AY.620.000871
ORF1ab/nsp4204T204IaCcaTc22AY.640.00119
ORF1ab/nsp4204T204IaCcaTc22AY.7.20.001119
ORF1ab/nsp4204T204IaCcaTc22AY.730.001331
ORF1ab/nsp4204T204IaCcaTc22AY.80.001212
ORF1ab/nsp4204T204IaCcaTc22AY.820.002714
ORF1ab/nsp4204T204IaCcaTc22AY.9.2.10.003953
ORF1ab/nsp4204T204IaCcaTc22AY.960.004149
ORF1ab/nsp4204T204IaCcaTc22AY.990.002099
ORF1ab/nsp4204T204IaCcaTc22B.1.1.2160.001781
ORF1ab/nsp4204T204IaCcaTc22B.1.1.2220.000408
ORF1ab/nsp4204T204IaCcaTc22B.1.1.2650.006309
ORF1ab/nsp4204T204IaCcaTc22B.1.1.2840.000215
ORF1ab/nsp4204T204IaCcaTc22B.1.1.4340.000697
ORF1ab/nsp4204T204IaCcaTc22B.1.177.40.000422
ORF1ab/nsp4204T204IaCcaTc22B.1.177.730.001133
ORF1ab/nsp4204T204IaCcaTc22B.1.177.80.001505
ORF1ab/nsp4204T204IaCcaTc22B.1.177.810.000379
ORF1ab/nsp4204T204IaCcaTc22B.1.177.820.000955
ORF1ab/nsp4204T204IaCcaTc22B.1.177.870.001456
ORF1ab/nsp4204T204IaCcaTc22B.1.2340.000264
ORF1ab/nsp4204T204IaCcaTc22B.1.2390.002442
ORF1ab/nsp4204T204IaCcaTc22B.1.243.10.044444
ORF1ab/nsp4204T204IaCcaTc22B.1.30.005236
ORF1ab/nsp4204T204IaCcaTc22B.1.3110.000549
ORF1ab/nsp4204T204IaCcaTc22B.1.360.000292
ORF1ab/nsp4204T204IaCcaTc22B.1.36.280.011494
ORF1ab/nsp4204T204IaCcaTc22B.1.36.290.001035
ORF1ab/nsp4204T204IaCcaTc22B.1.3710.002245
ORF1ab/nsp4204T204IaCcaTc22B.1.4130.008511
ORF1ab/nsp4204T204IaCcaTc22B.1.5870.003795
ORF1ab/nsp4204T204IaCcaTc22B.1.6190.001742
ORF1ab/nsp4204T204IaCcaTc22P.1.10.000635
ORF1ab/nsp4204T204IaCcaTc22P.1.150.000465
ORF1ab/nsp4204T204IaCcaTc22P.1.160.000748
ORF1ab/nsp4204T204IaCcaTc22Q.10.000253
ORF1ab/nsp4204T204IaCcaTc22Q.70.002222
ORF1ab/nsp4204T204IaCcaTc22Q.80.00033
ORF1ab/nsp4204T204IaCcaTc11A.20.000662
ORF1ab/nsp4204T204IaCcaTc11A.2.50.000499
ORF1ab/nsp4204T204IaCcaTc11A.2.5.10.004808
ORF1ab/nsp4204T204IaCcaTc11A.2.5.20.001572
ORF1ab/nsp4204T204IaCcaTc11A.50.001923
ORF1ab/nsp4204T204IaCcaTc11AA.70.009174
ORF1ab/nsp4204T204IaCcaTc11AD.20.000219
ORF1ab/nsp4204T204IaCcaTc11AE.80.000489
ORF1ab/nsp4204T204IaCcaTc11AY.1040.001984
ORF1ab/nsp4204T204IaCcaTc11AY.1140.000231
ORF1ab/nsp4204T204IaCcaTc11AY.116.10.000311
ORF1ab/nsp4204T204IaCcaTc11AY.120.000316
ORF1ab/nsp4204T204IaCcaTc11AY.120.20.001285
ORF1ab/nsp4204T204IaCcaTc11AY.16.10.00047
ORF1ab/nsp4204T204IaCcaTc11AY.190.00114
ORF1ab/nsp4204T204IaCcaTc11AY.240.000431
ORF1ab/nsp4204T204IaCcaTc11AY.46.30.000934
ORF1ab/nsp4204T204IaCcaTc11AY.650.000533
ORF1ab/nsp4204T204IaCcaTc11AY.720.001361
ORF1ab/nsp4204T204IaCcaTc11AY.780.001541
ORF1ab/nsp4204T204IaCcaTc11AY.810.001992
ORF1ab/nsp4204T204IaCcaTc11AY.930.000273
ORF1ab/nsp4204T204IaCcaTc11AY.950.000761
ORF1ab/nsp4204T204IaCcaTc11AY.970.001701
ORF1ab/nsp4204T204IaCcaTc11B.1.1.1210.002427
ORF1ab/nsp4204T204IaCcaTc11B.1.1.1450.037037
ORF1ab/nsp4204T204IaCcaTc11B.1.1.1920.002309
ORF1ab/nsp4204T204IaCcaTc11B.1.1.2070.001182
ORF1ab/nsp4204T204IaCcaTc11B.1.1.2200.001859
ORF1ab/nsp4204T204IaCcaTc11B.1.1.2370.005405
ORF1ab/nsp4204T204IaCcaTc11B.1.1.250.000569
ORF1ab/nsp4204T204IaCcaTc11B.1.1.2630.001558
ORF1ab/nsp4204T204IaCcaTc11B.1.1.2690.001353
ORF1ab/nsp4204T204IaCcaTc11B.1.1.2800.003086
ORF1ab/nsp4204T204IaCcaTc11B.1.1.290.010309
ORF1ab/nsp4204T204IaCcaTc11B.1.1.2940.001266
ORF1ab/nsp4204T204IaCcaTc11B.1.1.3050.003861
ORF1ab/nsp4204T204IaCcaTc11B.1.1.3190.017544
ORF1ab/nsp4204T204IaCcaTc11B.1.1.3370.003597
ORF1ab/nsp4204T204IaCcaTc11B.1.1.3720.000689
ORF1ab/nsp4204T204IaCcaTc11B.1.1.3800.009804
ORF1ab/nsp4204T204IaCcaTc11B.1.1.4160.000905
ORF1ab/nsp4204T204IaCcaTc11B.1.1.4170.002703
ORF1ab/nsp4204T204IaCcaTc11B.1.1.4260.035714
ORF1ab/nsp4204T204IaCcaTc11B.1.1.4450.037037
ORF1ab/nsp4204T204IaCcaTc11B.1.1.5180.006329
ORF1ab/nsp4204T204IaCcaTc11B.1.110.30.000718
ORF1ab/nsp4204T204IaCcaTc11B.1.1110.001175
ORF1ab/nsp4204T204IaCcaTc11B.1.1190.010526
ORF1ab/nsp4204T204IaCcaTc11B.1.160.160.000929
ORF1ab/nsp4204T204IaCcaTc11B.1.160.310.008065
ORF1ab/nsp4204T204IaCcaTc11B.1.160.80.001289
ORF1ab/nsp4204T204IaCcaTc11B.1.177.120.000152
ORF1ab/nsp4204T204IaCcaTc11B.1.177.140.006098
ORF1ab/nsp4204T204IaCcaTc11B.1.177.150.000631
ORF1ab/nsp4204T204IaCcaTc11B.1.177.170.000821
ORF1ab/nsp4204T204IaCcaTc11B.1.177.200.001517
ORF1ab/nsp4204T204IaCcaTc11B.1.177.210.000076
ORF1ab/nsp4204T204IaCcaTc11B.1.177.270.009434
ORF1ab/nsp4204T204IaCcaTc11B.1.177.460.000918
ORF1ab/nsp4204T204IaCcaTc11B.1.177.50.001242
ORF1ab/nsp4204T204IaCcaTc11B.1.177.70.000165
ORF1ab/nsp4204T204IaCcaTc11B.1.177.770.000726
ORF1ab/nsp4204T204IaCcaTc11B.1.177.850.005435
ORF1ab/nsp4204T204IaCcaTc11B.1.1800.05
ORF1ab/nsp4204T204IaCcaTc11B.1.2100.002132
ORF1ab/nsp4204T204IaCcaTc11B.1.2220.001692
ORF1ab/nsp4204T204IaCcaTc11B.1.2230.002778
ORF1ab/nsp4204T204IaCcaTc11B.1.2350.002519
ORF1ab/nsp4204T204IaCcaTc11B.1.243.20.014493
ORF1ab/nsp4204T204IaCcaTc11B.1.3010.005917
ORF1ab/nsp4204T204IaCcaTc11B.1.3380.008621
ORF1ab/nsp4204T204IaCcaTc11B.1.3460.001311
ORF1ab/nsp4204T204IaCcaTc11B.1.3490.000715
ORF1ab/nsp4204T204IaCcaTc11B.1.350.008475
ORF1ab/nsp4204T204IaCcaTc11B.1.351.30.000876
ORF1ab/nsp4204T204IaCcaTc11B.1.36.170.000494
ORF1ab/nsp4204T204IaCcaTc11B.1.36.180.00042
ORF1ab/nsp4204T204IaCcaTc11B.1.36.200.016949
ORF1ab/nsp4204T204IaCcaTc11B.1.36.350.002604
ORF1ab/nsp4204T204IaCcaTc11B.1.36.390.002217
ORF1ab/nsp4204T204IaCcaTc11B.1.36.80.001
ORF1ab/nsp4204T204IaCcaTc11B.1.4020.009804
ORF1ab/nsp4204T204IaCcaTc11B.1.4080.00369
ORF1ab/nsp4204T204IaCcaTc11B.1.4530.003236
ORF1ab/nsp4204T204IaCcaTc11B.1.4990.00105
ORF1ab/nsp4204T204IaCcaTc11B.1.5090.000866
ORF1ab/nsp4204T204IaCcaTc11B.1.5330.009615
ORF1ab/nsp4204T204IaCcaTc11B.1.5440.006024
ORF1ab/nsp4204T204IaCcaTc11B.1.5680.001111
ORF1ab/nsp4204T204IaCcaTc11B.1.5820.000491
ORF1ab/nsp4204T204IaCcaTc11B.1.6020.006536
ORF1ab/nsp4204T204IaCcaTc11B.1.6230.000536
ORF1ab/nsp4204T204IaCcaTc11B.1.780.008547
ORF1ab/nsp4204T204IaCcaTc11B.1.840.020833
ORF1ab/nsp4204T204IaCcaTc11B.280.003279
ORF1ab/nsp4204T204IaCcaTc11B.290.003509
ORF1ab/nsp4204T204IaCcaTc11B.30.000831
ORF1ab/nsp4204T204IaCcaTc11B.3.10.001658
ORF1ab/nsp4204T204IaCcaTc11C.180.002591
ORF1ab/nsp4204T204IaCcaTc11P.1.120.000484
ORF1ab/nsp4204T204IaCcaTc11P.1.130.000898
ORF1ab/nsp4204T204IaCcaTc11P.1.60.001946
ORF1ab/nsp4204T204IaCcaTc11W.30.005263