CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 173 & Codon = Gcc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4173T173AT2936AnonsynAccGcc11711719071-9073

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4173T173AAccGcc117117All0.000022
ORF1ab/nsp4173T173AAccGcc4444B.1.258.170.004575
ORF1ab/nsp4173T173AAccGcc1919AY.540.001812
ORF1ab/nsp4173T173AAccGcc1515AY.46.50.002976
ORF1ab/nsp4173T173AAccGcc77B.1.617.20.000026
ORF1ab/nsp4173T173AAccGcc55AY.430.000022
ORF1ab/nsp4173T173AAccGcc44AY.390.000099
ORF1ab/nsp4173T173AAccGcc33AY.40.000005
ORF1ab/nsp4173T173AAccGcc33B.1.1.70.000003
ORF1ab/nsp4173T173AAccGcc220.111111
ORF1ab/nsp4173T173AAccGcc22AY.1000.000092
ORF1ab/nsp4173T173AAccGcc11AY.1160.000287
ORF1ab/nsp4173T173AAccGcc11AY.290.000016
ORF1ab/nsp4173T173AAccGcc11AY.330.000067
ORF1ab/nsp4173T173AAccGcc11AY.440.000006
ORF1ab/nsp4173T173AAccGcc11AY.50.000021
ORF1ab/nsp4173T173AAccGcc11B.10.000009
ORF1ab/nsp4173T173AAccGcc11B.1.10.000018
ORF1ab/nsp4173T173AAccGcc11B.1.1.2840.000107
ORF1ab/nsp4173T173AAccGcc11B.1.1.700.000341
ORF1ab/nsp4173T173AAccGcc11B.1.2430.00007
ORF1ab/nsp4173T173AAccGcc11B.1.36.290.000517
ORF1ab/nsp4173T173AAccGcc11B.1.4000.000429
ORF1ab/nsp4173T173AAccGcc11B.1.4290.000024