CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 143 & Codon = acC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4143T143TT2906TsynacTacC83741710.02042038981-8983

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4143T143TacTacC1718374All0.000033
ORF1ab/nsp4143T143TacTacC38281B.1.1.70.000034
ORF1ab/nsp4143T143TacTacC163B.10.000009
ORF1ab/nsp4143T143TacTacC1029B.1.617.20.000038
ORF1ab/nsp4143T143TacTacC225AY.9.10.000167
ORF1ab/nsp4143T143TacTacC225B.1.1770.000026
ORF1ab/nsp4143T143TacTacC2323AY.300.009102
ORF1ab/nsp4143T143TacTacC1919AY.75.10.003426
ORF1ab/nsp4143T143TacTacC1515B.1.177.770.010893
ORF1ab/nsp4143T143TacTacC313P.10.000047
ORF1ab/nsp4143T143TacTacC1010AY.30.000099
ORF1ab/nsp4143T143TacTacC110B.1.10.000018
ORF1ab/nsp4143T143TacTacC110B.1.2100.002132
ORF1ab/nsp4143T143TacTacC79B.1.4290.000165
ORF1ab/nsp4143T143TacTacC37Q.10.000379
ORF1ab/nsp4143T143TacTacC16B.1.5260.000024
ORF1ab/nsp4143T143TacTacC25AY.1000.000092
ORF1ab/nsp4143T143TacTacC45AY.40.000006
ORF1ab/nsp4143T143TacTacC25AY.440.000012
ORF1ab/nsp4143T143TacTacC35B.1.20.000026
ORF1ab/nsp4143T143TacTacC44B.1.1.2770.003035
ORF1ab/nsp4143T143TacTacC33AY.98.10.000145
ORF1ab/nsp4143T143TacTacC22AY.200.000078
ORF1ab/nsp4143T143TacTacC12AY.260.000028
ORF1ab/nsp4143T143TacTacC12AY.610.000105
ORF1ab/nsp4143T143TacTacC22B.1.177.210.000153
ORF1ab/nsp4143T143TacTacC22B.1.3990.003868
ORF1ab/nsp4143T143TacTacC12B.1.4270.00005
ORF1ab/nsp4143T143TacTacC22B.1.5750.000607
ORF1ab/nsp4143T143TacTacC11AY.1160.000287
ORF1ab/nsp4143T143TacTacC11AY.5.30.000337
ORF1ab/nsp4143T143TacTacC11AY.520.000814
ORF1ab/nsp4143T143TacTacC11B.1.1.2320.001815
ORF1ab/nsp4143T143TacTacC11B.1.3510.00003
ORF1ab/nsp4143T143TacTacC11C.370.000116