CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp4 : CodonNum = 143 & Codon = aTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp4143T143IT2906InonsynaCtaTt3711371118981-8983

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp4143T143IaCtaTt37113711All0.00071
ORF1ab/nsp4143T143IaCtaTt581581AY.40.000904
ORF1ab/nsp4143T143IaCtaTt578578B.1.1.70.000517
ORF1ab/nsp4143T143IaCtaTt499499AY.430.002211
ORF1ab/nsp4143T143IaCtaTt368368B.1.617.20.001386
ORF1ab/nsp4143T143IaCtaTt351351AY.90.023726
ORF1ab/nsp4143T143IaCtaTt183183AY.30.00182
ORF1ab/nsp4143T143IaCtaTt9696B.1.1.2840.01031
ORF1ab/nsp4143T143IaCtaTt6262AY.390.001532
ORF1ab/nsp4143T143IaCtaTt6161B.1.1770.000803
ORF1ab/nsp4143T143IaCtaTt5959B.1.258.170.006134
ORF1ab/nsp4143T143IaCtaTt5858B.1.20.000511
ORF1ab/nsp4143T143IaCtaTt4040AY.440.000243
ORF1ab/nsp4143T143IaCtaTt4040AY.99.20.003686
ORF1ab/nsp4143T143IaCtaTt3030AY.46.40.004935
ORF1ab/nsp4143T143IaCtaTt2525AY.1030.000155
ORF1ab/nsp4143T143IaCtaTt2424B.10.00022
ORF1ab/nsp4143T143IaCtaTt2323AY.470.000715
ORF1ab/nsp4143T143IaCtaTt2323B.1.3510.000684
ORF1ab/nsp4143T143IaCtaTt2222AY.9.2.10.043478
ORF1ab/nsp4143T143IaCtaTt2222B.1.6280.007752
ORF1ab/nsp4143T143IaCtaTt2121B.1.1.3710.21875
ORF1ab/nsp4143T143IaCtaTt1919AY.1020.000504
ORF1ab/nsp4143T143IaCtaTt1818C.360.016393
ORF1ab/nsp4143T143IaCtaTt1717AY.5.40.004704
ORF1ab/nsp4143T143IaCtaTt1717B.1.2210.001208
ORF1ab/nsp4143T143IaCtaTt1717P.10.000268
ORF1ab/nsp4143T143IaCtaTt1616AY.140.001408
ORF1ab/nsp4143T143IaCtaTt1616B.1.10.00029
ORF1ab/nsp4143T143IaCtaTt1515AY.250.00009
ORF1ab/nsp4143T143IaCtaTt1515AY.460.001561
ORF1ab/nsp4143T143IaCtaTt1515B.1.36.170.007411
ORF1ab/nsp4143T143IaCtaTt1414AY.350.003263
ORF1ab/nsp4143T143IaCtaTt1111AE.70.916667
ORF1ab/nsp4143T143IaCtaTt99B.1.4270.000454
ORF1ab/nsp4143T143IaCtaTt88AY.200.000311
ORF1ab/nsp4143T143IaCtaTt88AY.50.000165
ORF1ab/nsp4143T143IaCtaTt88AY.60.000329
ORF1ab/nsp4143T143IaCtaTt88AY.980.000632
ORF1ab/nsp4143T143IaCtaTt88B.1.4290.000188
ORF1ab/nsp4143T143IaCtaTt88B.1.617.10.001032
ORF1ab/nsp4143T143IaCtaTt77AY.1180.000439
ORF1ab/nsp4143T143IaCtaTt77AY.75.10.001262
ORF1ab/nsp4143T143IaCtaTt77B.1.1.5190.000278
ORF1ab/nsp4143T143IaCtaTt77B.1.1600.000218
ORF1ab/nsp4143T143IaCtaTt77B.1.2350.017632
ORF1ab/nsp4143T143IaCtaTt77B.1.36.10.007982
ORF1ab/nsp4143T143IaCtaTt66AY.130.000966
ORF1ab/nsp4143T143IaCtaTt66AY.690.00112
ORF1ab/nsp4143T143IaCtaTt66AY.920.001724
ORF1ab/nsp4143T143IaCtaTt66B.1.2580.000399
ORF1ab/nsp4143T143IaCtaTt66B.1.5960.000523
ORF1ab/nsp4143T143IaCtaTt66P.1.120.002904
ORF1ab/nsp4143T143IaCtaTt55AY.1160.001434
ORF1ab/nsp4143T143IaCtaTt55AY.1190.000177
ORF1ab/nsp4143T143IaCtaTt55AY.260.000142
ORF1ab/nsp4143T143IaCtaTt55AY.540.000477
ORF1ab/nsp4143T143IaCtaTt55AY.9.20.000184
ORF1ab/nsp4143T143IaCtaTt55B.1.177.810.000947
ORF1ab/nsp4143T143IaCtaTt55B.1.3690.001426
ORF1ab/nsp4143T143IaCtaTt44AY.330.000267
ORF1ab/nsp4143T143IaCtaTt44AY.940.001771
ORF1ab/nsp4143T143IaCtaTt44B.1.1.1210.009709
ORF1ab/nsp4143T143IaCtaTt44B.1.160.80.005155
ORF1ab/nsp4143T143IaCtaTt44B.1.177.160.002658
ORF1ab/nsp4143T143IaCtaTt44B.1.2400.000862
ORF1ab/nsp4143T143IaCtaTt44B.1.2430.000278
ORF1ab/nsp4143T143IaCtaTt44B.1.3460.005242
ORF1ab/nsp4143T143IaCtaTt44B.1.360.000584
ORF1ab/nsp4143T143IaCtaTt44C.370.000464
ORF1ab/nsp4143T143IaCtaTt33AY.1170.000254
ORF1ab/nsp4143T143IaCtaTt33AY.1200.000112
ORF1ab/nsp4143T143IaCtaTt33AY.230.000209
ORF1ab/nsp4143T143IaCtaTt33AY.320.001597
ORF1ab/nsp4143T143IaCtaTt33AY.39.10.000119
ORF1ab/nsp4143T143IaCtaTt33AY.4.20.000065
ORF1ab/nsp4143T143IaCtaTt33AY.610.000314
ORF1ab/nsp4143T143IaCtaTt33B.1.1.3060.001315
ORF1ab/nsp4143T143IaCtaTt33B.1.1.370.000579
ORF1ab/nsp4143T143IaCtaTt33B.1.2340.000396
ORF1ab/nsp4143T143IaCtaTt33P.20.00056
ORF1ab/nsp4143T143IaCtaTt22AY.1000.000092
ORF1ab/nsp4143T143IaCtaTt22AY.1060.00067
ORF1ab/nsp4143T143IaCtaTt22AY.270.000129
ORF1ab/nsp4143T143IaCtaTt22AY.3.10.000171
ORF1ab/nsp4143T143IaCtaTt22AY.380.000999
ORF1ab/nsp4143T143IaCtaTt22AY.4.50.000215
ORF1ab/nsp4143T143IaCtaTt22AY.420.00008
ORF1ab/nsp4143T143IaCtaTt22AY.46.60.000144
ORF1ab/nsp4143T143IaCtaTt22AY.750.000112
ORF1ab/nsp4143T143IaCtaTt22B.1.1.1380.012121
ORF1ab/nsp4143T143IaCtaTt22B.1.1.2140.000111
ORF1ab/nsp4143T143IaCtaTt22B.1.1.3110.000716
ORF1ab/nsp4143T143IaCtaTt22B.1.177.520.003515
ORF1ab/nsp4143T143IaCtaTt22B.1.177.730.001133
ORF1ab/nsp4143T143IaCtaTt22B.1.36.250.004415
ORF1ab/nsp4143T143IaCtaTt22B.1.4160.002538
ORF1ab/nsp4143T143IaCtaTt22B.1.4700.002809
ORF1ab/nsp4143T143IaCtaTt22B.1.5050.008772
ORF1ab/nsp4143T143IaCtaTt22B.1.5250.000226
ORF1ab/nsp4143T143IaCtaTt22B.1.6090.000959
ORF1ab/nsp4143T143IaCtaTt22B.1.6210.000177
ORF1ab/nsp4143T143IaCtaTt22D.20.00015
ORF1ab/nsp4143T143IaCtaTt22P.1.150.000465
ORF1ab/nsp4143T143IaCtaTt22P.1.170.000324
ORF1ab/nsp4143T143IaCtaTt22P.1.60.003891
ORF1ab/nsp4143T143IaCtaTt22P.60.006289
ORF1ab/nsp4143T143IaCtaTt11A.2.50.000499
ORF1ab/nsp4143T143IaCtaTt11AU.20.002421
ORF1ab/nsp4143T143IaCtaTt11AY.100.00053
ORF1ab/nsp4143T143IaCtaTt11AY.160.00038
ORF1ab/nsp4143T143IaCtaTt11AY.240.000431
ORF1ab/nsp4143T143IaCtaTt11AY.290.000016
ORF1ab/nsp4143T143IaCtaTt11AY.34.10.00051
ORF1ab/nsp4143T143IaCtaTt11AY.360.000148
ORF1ab/nsp4143T143IaCtaTt11AY.4.2.10.000149
ORF1ab/nsp4143T143IaCtaTt11AY.450.000122
ORF1ab/nsp4143T143IaCtaTt11AY.46.10.001027
ORF1ab/nsp4143T143IaCtaTt11AY.46.20.000635
ORF1ab/nsp4143T143IaCtaTt11AY.530.000288
ORF1ab/nsp4143T143IaCtaTt11AY.680.000274
ORF1ab/nsp4143T143IaCtaTt11AY.930.000273
ORF1ab/nsp4143T143IaCtaTt11AZ.30.00152
ORF1ab/nsp4143T143IaCtaTt11B0.000128
ORF1ab/nsp4143T143IaCtaTt11B.1.1.1980.001468
ORF1ab/nsp4143T143IaCtaTt11B.1.1.2180.007692
ORF1ab/nsp4143T143IaCtaTt11B.1.1.2220.000204
ORF1ab/nsp4143T143IaCtaTt11B.1.1.250.000569
ORF1ab/nsp4143T143IaCtaTt11B.1.1.280.000311
ORF1ab/nsp4143T143IaCtaTt11B.1.1.3010.001179
ORF1ab/nsp4143T143IaCtaTt11B.1.1.3610.045455
ORF1ab/nsp4143T143IaCtaTt11B.1.1.4090.002833
ORF1ab/nsp4143T143IaCtaTt11B.1.1.410.006329
ORF1ab/nsp4143T143IaCtaTt11B.1.1.4340.000349
ORF1ab/nsp4143T143IaCtaTt11B.1.1.4510.038462
ORF1ab/nsp4143T143IaCtaTt11B.1.110.30.000718
ORF1ab/nsp4143T143IaCtaTt11B.1.1280.000635
ORF1ab/nsp4143T143IaCtaTt11B.1.177.120.000152
ORF1ab/nsp4143T143IaCtaTt11B.1.177.150.000631
ORF1ab/nsp4143T143IaCtaTt11B.1.177.210.000076
ORF1ab/nsp4143T143IaCtaTt11B.1.177.230.003236
ORF1ab/nsp4143T143IaCtaTt11B.1.177.40.000211
ORF1ab/nsp4143T143IaCtaTt11B.1.177.70.000165
ORF1ab/nsp4143T143IaCtaTt11B.1.177.750.001041
ORF1ab/nsp4143T143IaCtaTt11B.1.177.770.000726
ORF1ab/nsp4143T143IaCtaTt11B.1.177.860.000183
ORF1ab/nsp4143T143IaCtaTt11B.1.177.90.001332
ORF1ab/nsp4143T143IaCtaTt11B.1.214.20.0006
ORF1ab/nsp4143T143IaCtaTt11B.1.221.40.004167
ORF1ab/nsp4143T143IaCtaTt11B.1.3430.020833
ORF1ab/nsp4143T143IaCtaTt11B.1.36.180.00042
ORF1ab/nsp4143T143IaCtaTt11B.1.3710.001122
ORF1ab/nsp4143T143IaCtaTt11B.1.4000.000429
ORF1ab/nsp4143T143IaCtaTt11B.1.4530.003236
ORF1ab/nsp4143T143IaCtaTt11B.1.5170.000427
ORF1ab/nsp4143T143IaCtaTt11B.1.5260.000024
ORF1ab/nsp4143T143IaCtaTt11B.1.5740.002151
ORF1ab/nsp4143T143IaCtaTt11B.1.617.30.002985
ORF1ab/nsp4143T143IaCtaTt11B.1.6370.000073
ORF1ab/nsp4143T143IaCtaTt11B.1.930.000934
ORF1ab/nsp4143T143IaCtaTt11B.30.000831
ORF1ab/nsp4143T143IaCtaTt11C.350.000774
ORF1ab/nsp4143T143IaCtaTt11C.36.10.004149
ORF1ab/nsp4143T143IaCtaTt11C.380.008065
ORF1ab/nsp4143T143IaCtaTt11N.60.007092
ORF1ab/nsp4143T143IaCtaTt11N.80.03125
ORF1ab/nsp4143T143IaCtaTt11P.1.140.000048